Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0130
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 31 1.3
SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2) 31 1.3
SB_56925| Best HMM Match : RVP (HMM E-Value=2.3) 30 2.3
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_44556| Best HMM Match : RVP (HMM E-Value=2.3) 30 2.3
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4) 30 2.3
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 30 2.3
SB_7574| Best HMM Match : RVP (HMM E-Value=2.3) 30 2.3
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4) 30 2.3
SB_22574| Best HMM Match : RVP (HMM E-Value=1.4) 30 2.3
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 30 2.3
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 29 3.0
SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1) 29 3.0
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 4.0
SB_27175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 9.2
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 31.1 bits (67), Expect = 0.99
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ V D ++ ++ R+S TRL N+ + VS +
Sbjct: 348 AVVLRIQTRQSPYLDVF-YNHHTVRVTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 405
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 406 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 444
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/82 (31%), Positives = 35/82 (42%)
Frame = -3
Query: 537 RWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASVGSAEG 358
R L SG + + +GRV DD S H RV+ G L +VL G E
Sbjct: 23 RLKLHKSGAVFKASKTGRVDQFSKDDIESAHWLRVA-CGQELKIVLKSGLQFRFDGFKES 81
Query: 357 EIRIFSRVLRSFASGGLALENV 292
+ S L+SF G+ LE +
Sbjct: 82 DFANLSEFLKSFF--GVKLEEM 101
>SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2)
Length = 288
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 233 SDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISP--SAEPTDAETLGTART 406
SD TD S+ ASA F ASPP+ K LR R+ + +P S + +D++ L + T
Sbjct: 77 SDCTD---SSDAVSRPASAEPF--ASPPQPKSLRQRMLQKYNPENSVDDSDSDDLESFFT 131
Query: 407 K 409
K
Sbjct: 132 K 132
>SB_56925| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 226
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 119 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 176
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 177 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 215
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 290 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 347
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 348 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 386
>SB_44556| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 198 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 255
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 256 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 294
>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 230
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 46 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 103
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 104 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 142
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 302 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 359
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 360 DGSSQLHVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 398
>SB_7574| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 253
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 146 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 203
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 204 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 242
>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 577
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 301 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 358
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 359 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 397
>SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 382
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 198 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 255
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 256 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 294
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 549 AVTVRWLLEPSGCIDIINFSGRVTDVKADDFSSLHLRRVSYVGTRL--NLVLAVPRVSAS 376
AV +R S +D+ ++ + D ++ ++ R+S TRL N+ + VS +
Sbjct: 311 AVVLRIQTRQSPYLDVF-YNHHTVRMTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQA 368
Query: 375 VGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATA 274
GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 369 DGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLA 407
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = -3
Query: 420 TRL--NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL 262
TRL N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A
Sbjct: 8 TRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPF 67
Query: 261 ADTS 250
+T+
Sbjct: 68 METN 71
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 239 VTDNDVSARETEAVASATTFSRASP--PEAKDLRTRLKMRISPSAEPTDAETLGTARTKL 412
++ V ++T++ +S T R P P + D +++L A PT + ++ T +
Sbjct: 975 ISSRPVVVQQTKSPSSYPTVIRPKPSLPYSHDFKSKLSSPYHSEARPTSSSSVQTGEKTI 1034
Query: 413 SRVPT*LTRRKCRELKSSALTSVTRP 490
S T ++ + + ++ ++ T P
Sbjct: 1035 SSHITGVSTAQITSMSTTTESTTTHP 1060
>SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1)
Length = 812
Score = 29.5 bits (63), Expect = 3.0
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Frame = +2
Query: 251 DVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT* 430
+ S + A + + R P A+ TR I + AET G+ + RV +
Sbjct: 638 ECSIHQQRQEAVSISRDRRQYPSAEAEETRGS--IHQQRQYPSAETEGSIHQQRQRVVS- 694
Query: 431 LTRRKCRELKSSALTSVTRPEKLMMSMHPEGSRSQRTVTAERISRS-QQFTDFIEQV*DH 607
++R K R+ S+ S++R + S EGS Q+ A ISR +Q+ + H
Sbjct: 695 ISRDK-RQYPSAETVSISRDRRQYPSAETEGSIHQQRQEAVSISRDRRQYPSAEAEGSIH 753
Query: 608 DVKDALRIRLEIDIAMWHSRHAARQGKMKLHC 703
+ I H+ +Q + HC
Sbjct: 754 QQRQEAVSISRSSIQQHHNHICQQQNRHNHHC 785
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/89 (24%), Positives = 35/89 (39%)
Frame = +2
Query: 308 SPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTR 487
S +A+D K SPS + + + +R++ R + + R S R
Sbjct: 188 SKDKAQDTEKDRKSSRSPSTDKRKSRSRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARR 247
Query: 488 PEKLMMSMHPEGSRSQRTVTAERISRSQQ 574
S P+ SRS R+ R SRS +
Sbjct: 248 SRSPQKSRSPQRSRSPRSSKRYRSSRSHR 276
>SB_27175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 28.3 bits (60), Expect = 7.0
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = +2
Query: 227 CSSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTART 406
C +D AR VA+A + A P E ++L+ L ++ + + L +
Sbjct: 1417 CRADTGTASADARSQHEVAAADSVEPAIP-EWRNLKEVLVPSLTNNLLKNLPKNLANSIK 1475
Query: 407 KLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSMHPEGSRSQRTVTAERISR 565
L V L R+ R + S + RP+ + PEG+ T + ER R
Sbjct: 1476 NL-HVRLWLPPRQRRATRESRAPNRPRPDLTLDESKPEGAWQSGTESTERRKR 1527
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Frame = +2
Query: 245 DNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE--PTDAETLGTARTKLSR 418
D+DV A A + SPP+ K +PS++ P DAET + T +
Sbjct: 258 DSDVVVIADNAPAGGLVTAAPSPPDKKQSSVCHTPPKTPSSKTTPADAETKTSPSTTSPQ 317
Query: 419 VPT*LTRRKCRELKSSALTSVTRPEKLMMSMHPEGSRSQRTVTAER 556
L +++ +E + + E+L E R ++ E+
Sbjct: 318 TNKALRQKEEKEKQRLEAKAAKEKERLEAKQKKEQERLEKQAEKEK 363
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,134,505
Number of Sequences: 59808
Number of extensions: 403689
Number of successful extensions: 1131
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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