Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0130
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13616-1|AAA64834.1| 4377|Homo sapiens ankyrin G protein. 32 1.9
AL592430-3|CAI40518.1| 4372|Homo sapiens ankyrin 3, node of Ranv... 32 1.9
AL359377-2|CAI41373.1| 4372|Homo sapiens ankyrin 3, node of Ranv... 32 1.9
AL359267-1|CAH73232.1| 4372|Homo sapiens ankyrin 3, node of Ranv... 32 1.9
X56654-1|CAA39976.1| 1049|Homo sapiens desmoglein type 1 protein. 31 5.8
AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens ... 31 5.8
AF097935-1|AAC83817.1| 1049|Homo sapiens desmoglein 1 protein. 31 5.8
>U13616-1|AAA64834.1| 4377|Homo sapiens ankyrin G protein.
Length = 4377
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = +2
Query: 230 SSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTK 409
S + + S+ E A+AT S+ P LRT +KM IS S E G K
Sbjct: 3689 SGECQEGTSSSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDK 3744
Query: 410 LSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSMHP 517
+ V T C+ L++ +T ++ M + P
Sbjct: 3745 IEAVMT-----SCQGLENETITMISNTANSQMGVRP 3775
>AL592430-3|CAI40518.1| 4372|Homo sapiens ankyrin 3, node of Ranvier
(ankyrin G) protein.
Length = 4372
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = +2
Query: 230 SSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTK 409
S + + S+ E A+AT S+ P LRT +KM IS S E G K
Sbjct: 3684 SGECQEGTSSSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDK 3739
Query: 410 LSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSMHP 517
+ V T C+ L++ +T ++ M + P
Sbjct: 3740 IEAVMT-----SCQGLENETITMISNTANSQMGVRP 3770
>AL359377-2|CAI41373.1| 4372|Homo sapiens ankyrin 3, node of Ranvier
(ankyrin G) protein.
Length = 4372
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = +2
Query: 230 SSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTK 409
S + + S+ E A+AT S+ P LRT +KM IS S E G K
Sbjct: 3684 SGECQEGTSSSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDK 3739
Query: 410 LSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSMHP 517
+ V T C+ L++ +T ++ M + P
Sbjct: 3740 IEAVMT-----SCQGLENETITMISNTANSQMGVRP 3770
>AL359267-1|CAH73232.1| 4372|Homo sapiens ankyrin 3, node of Ranvier
(ankyrin G) protein.
Length = 4372
Score = 32.3 bits (70), Expect = 1.9
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = +2
Query: 230 SSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTK 409
S + + S+ E A+AT S+ P LRT +KM IS S E G K
Sbjct: 3684 SGECQEGTSSSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDK 3739
Query: 410 LSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSMHP 517
+ V T C+ L++ +T ++ M + P
Sbjct: 3740 IEAVMT-----SCQGLENETITMISNTANSQMGVRP 3770
>X56654-1|CAA39976.1| 1049|Homo sapiens desmoglein type 1 protein.
Length = 1049
Score = 30.7 bits (66), Expect = 5.8
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Frame = +2
Query: 212 IANSYCSSDVTDNDVSARETEAVASATTFSRA-SPPEAKDLRTRLKMRISPSAEPTDAET 388
+ SY +SD V + ++ R P DL L+M P +
Sbjct: 837 VTESYTTSDTLKPSVHVHDNRPASNVVVTERVVGPISGADLHGMLEM---PDLRD-GSNV 892
Query: 389 LGTART--KLSRVPT*LTRRKCRELKSSALTS-VTRPEKLM---MSMHPEGSRSQRTVTA 550
+ T R S +PT LT RE + +T V +P M +SMHPE + + +
Sbjct: 893 IVTERVIAPSSSLPTSLTIHHPRESSNVVVTERVIQPTSGMIGSLSMHPELANAHNVIVT 952
Query: 551 ERI 559
ER+
Sbjct: 953 ERV 955
>AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ35435 fis, clone SMINT2002620. ).
Length = 615
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 275 AVASATTFSRASPPEAKDLRTRLKMRISP---SAEPTDAETLGTARTKLSRVP 424
A ++F R S DLRT R+ S+ TD++ LG+ RTK R P
Sbjct: 259 AFLKKSSFKRKSTSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSP 311
>AF097935-1|AAC83817.1| 1049|Homo sapiens desmoglein 1 protein.
Length = 1049
Score = 30.7 bits (66), Expect = 5.8
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Frame = +2
Query: 212 IANSYCSSDVTDNDVSARETEAVASATTFSRA-SPPEAKDLRTRLKMRISPSAEPTDAET 388
+ SY +SD V + ++ R P DL L+M P +
Sbjct: 837 VTESYTTSDTLKPSVHVHDNRPASNVVVTERVVGPISGADLHGMLEM---PDLRD-GSNV 892
Query: 389 LGTART--KLSRVPT*LTRRKCRELKSSALTS-VTRPEKLM---MSMHPEGSRSQRTVTA 550
+ T R S +PT LT RE + +T V +P M +SMHPE + + +
Sbjct: 893 IVTERVIAPSSSLPTSLTIHHPRESSNVVVTERVIQPTSGMIGSLSMHPELANAHNVIVT 952
Query: 551 ERI 559
ER+
Sbjct: 953 ERV 955
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,971,985
Number of Sequences: 237096
Number of extensions: 1775335
Number of successful extensions: 4907
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4907
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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