Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0130
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068721-9|AAC19265.1|  570|Caenorhabditis elegans Hypothetical ...    34   0.093
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr...    31   0.86 
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond...    31   0.86 
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical...    30   1.5  
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ...    30   1.5  
Z82275-3|CAL44962.1|  478|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z82265-8|CAB05169.2|  478|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical...    29   4.6  
AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical...    29   4.6  
AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical...    29   4.6  
AF099918-1|AAK29840.2|  820|Caenorhabditis elegans Hypothetical ...    28   6.1  

>AF068721-9|AAC19265.1|  570|Caenorhabditis elegans Hypothetical
           protein ZK1055.7 protein.
          Length = 570

 Score = 34.3 bits (75), Expect = 0.093
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +2

Query: 230 SSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGT 397
           S++VT+  +S + T          + + P + D + R+K+ +SP+A P DAE  GT
Sbjct: 463 SANVTEQTISIKNTRNEQPVLLTVKHAIPRSTDEKIRVKL-VSPAATPYDAEKAGT 517


>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
            R13G10.1 protein.
          Length = 1469

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 691  HLALP-SCVSAV-PHRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRD 542
            H+ LP  C+S + PHR+   E  ++ + D V  +  N+I +L +  D  RR+
Sbjct: 1087 HVVLPYECISMIEPHREAYEEHEARMLEDDVFEDTANKICKLEKDVDKFRRE 1138


>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
            condensation protein protein.
          Length = 1469

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 691  HLALP-SCVSAV-PHRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRD 542
            H+ LP  C+S + PHR+   E  ++ + D V  +  N+I +L +  D  RR+
Sbjct: 1087 HVVLPYECISMIEPHREAYEEHEARMLEDDVFEDTANKICKLEKDVDKFRRE 1138


>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
           protein Y18D10A.13 protein.
          Length = 2417

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 218 NSYCSSDVTDNDVSARETEAVASATTFSRASPPEAKDL 331
           NS CS+   D+DV++  + A A+A   S A PP+ +DL
Sbjct: 443 NSVCSTSNKDDDVTSVTSSAAANA---SSAPPPDEEDL 477


>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 2417

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 218 NSYCSSDVTDNDVSARETEAVASATTFSRASPPEAKDL 331
           NS CS+   D+DV++  + A A+A   S A PP+ +DL
Sbjct: 443 NSVCSTSNKDDDVTSVTSSAAANA---SSAPPPDEEDL 477


>Z82275-3|CAL44962.1|  478|Caenorhabditis elegans Hypothetical
           protein F02H6.2 protein.
          Length = 478

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 125 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVSARETEAVA 283
           Q +RD   EV+D    F  EE+D EV  +  ++      TD++V   + E V+
Sbjct: 28  QAERDGWNEVIDNVGEFEDEEVDEEVDEEEDHAEDEERDTDDEVEGFDKEIVS 80


>Z82265-8|CAB05169.2|  478|Caenorhabditis elegans Hypothetical
           protein F02H6.2 protein.
          Length = 478

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 125 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVSARETEAVA 283
           Q +RD   EV+D    F  EE+D EV  +  ++      TD++V   + E V+
Sbjct: 28  QAERDGWNEVIDNVGEFEDEEVDEEVDEEEDHAEDEERDTDDEVEGFDKEIVS 80


>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical protein
            K04D7.4 protein.
          Length = 1159

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 558  ILSAVTVRWLLEPSGCIDIINFSGRVTDVKADDFSS 451
            I +A T+   LE +GC+D++      T+++   F+S
Sbjct: 1104 ICAATTLACQLETTGCVDVVQVLSSYTEIQCGIFAS 1139


>AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19b protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = -2

Query: 265 PXRHIIVSDIG------AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 125
           P + I+V D G      AAI       NL +N  GRE  P + N+L+ I +Y+
Sbjct: 141 PDKKIVVIDAGIHAREWAAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191


>AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19a protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = -2

Query: 265 PXRHIIVSDIG------AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 125
           P + I+V D G      AAI       NL +N  GRE  P + N+L+ I +Y+
Sbjct: 141 PDKKIVVIDAGIHAREWAAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191


>AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19c protein.
          Length = 464

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = -2

Query: 265 PXRHIIVSDIG------AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 125
           P + I+V D G      AAI       NL +N  GRE  P + N+L+ I +Y+
Sbjct: 141 PDKKIVVIDAGIHAREWAAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191


>AF099918-1|AAK29840.2|  820|Caenorhabditis elegans Hypothetical
           protein H05C05.1a protein.
          Length = 820

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +2

Query: 260 ARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVP 424
           A + E  +S +   ++   EAK  +   K  + PSA  +D  +  T  T +++ P
Sbjct: 689 AEKPEGSSSGSATEKSKEIEAKSKKDDTKKPLEPSAASSDPSSSSTTTTTITKEP 743


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,351,792
Number of Sequences: 27780
Number of extensions: 289418
Number of successful extensions: 893
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)