Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0130
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13410.1 68416.m01686 expressed protein 32 0.46
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 30 1.9
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 29 2.5
At5g17160.1 68418.m02010 expressed protein 29 3.3
At5g42870.1 68418.m05225 lipin family protein contains Pfam prof... 29 4.3
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 29 4.3
At3g62620.1 68416.m07034 sucrose-phosphatase-related contains we... 28 5.7
At4g37250.1 68417.m05273 leucine-rich repeat family protein / pr... 28 7.5
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 27 9.9
At3g58780.1 68416.m06551 agamous-like MADS box protein AGL1 / sh... 27 9.9
At1g67140.1 68414.m07638 expressed protein 27 9.9
At1g35420.1 68414.m04394 dienelactone hydrolase family protein l... 27 9.9
>At3g13410.1 68416.m01686 expressed protein
Length = 321
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 161 GWSNFASEEIDLEVRFDIANSYCSSDVTDNDVSARETEAVASATTFS 301
GWSNF E LE D+A + ++ +DVS++ A T +
Sbjct: 70 GWSNFLCSEKKLEQPVDVALVFIGRELLSSDVSSKRNSDPALVNTLN 116
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 29.9 bits (64), Expect = 1.9
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Frame = +2
Query: 176 ASEEIDL-EVRFDIANSYCS-SDVTDNDVSARE---TEAVASATTFSRASPPEAKDLRTR 340
A + ++L E + +IAN D+ + D+++ E TE V T R P +
Sbjct: 109 ADQNLELVEKKEEIANGLVLVDDMNNKDLTSGEGLETEVVEEKTRKRRIISPGGNTSPKK 168
Query: 341 LKMRISPSAEPTDAETLGTARTK-LSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSMHP 517
K+ +SPSA E G + + +S+ R K ++ + A + EK +SM
Sbjct: 169 SKVDLSPSAVAATTELCGKVKGEVVSQSCAVSPREKLDDVVTRA--DIESGEKSGLSM-- 224
Query: 518 EGSRSQRTVTAERISRSQQFTDFIEQV*DH 607
G + Q +VT ER+ + T E V H
Sbjct: 225 -GEKQQTSVT-ERLLEEKNLTVNSELVDGH 252
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 EAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCRELKSSA-LTSVTRPE 493
+AK+ + K + + E AET+ TA+ K S + T + K +LK A S + E
Sbjct: 181 KAKEAKEAAKRKAGDAKEKL-AETVETAKEKASDM-TSAAKEKAEKLKEEAERESKSAKE 238
Query: 494 KLMMSMHPEGSRSQRTVTAERISRSQQF 577
K+ S S++ T+ + + SQ +
Sbjct: 239 KIKESYETAKSKADETLESAKDKASQSY 266
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 29.1 bits (62), Expect = 3.3
Identities = 37/183 (20%), Positives = 65/183 (35%)
Frame = +2
Query: 95 NTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVSARETE 274
N D +V Q D D E + S S+ E D + SD+ D +++ +E
Sbjct: 381 NNFDEETMVDQTDSDSETEPEENHSGVDSDGTISEA--DSNQAVVGSDIADEEMTLSGSE 438
Query: 275 AVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCRE 454
A+ S EAK ++T L + + T + T L P L
Sbjct: 439 GSAATAPNSPPRLEEAKVIKTTLVSPFAVESISTQFPRPSKSTTPLKNSPLKLVNENKEN 498
Query: 455 LKSSALTSVTRPEKLMMSMHPEGSRSQRTVTAERISRSQQFTDFIEQV*DHDVKDALRIR 634
+ +V E S EG + ++ E ++ + V + +K + R
Sbjct: 499 NMEMMMMNVNNNEN-GESKGEEGKKKKKVTIDEENLKNTSIRQLEKMVKELSIKTSNRTA 557
Query: 635 LEI 643
L++
Sbjct: 558 LQV 560
>At5g42870.1 68418.m05225 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 930
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 286 SNDVLKGKS-SGSERPQDAAENADFSFSGTD*C*NSGNSQD*VESGADVADTTQMQGAE 459
+ D K +S SG Q E FSFS D C GNS G+ +DT ++ G E
Sbjct: 374 AGDFEKSQSASGESILQPEIEEEQFSFSDLDECKPGGNS----SVGSSSSDTVKVDGKE 428
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
to disease resistance protein RPP1-WsB (GI:3860165)
[Arabidopsis thaliana]
Length = 1996
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +2
Query: 149 EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVSARETEAVASATTFSRASPPEAKD 328
E + WSN ASEEI+ E D N Y +D +++E + + + K+
Sbjct: 918 EQISDWSN-ASEEIETENISDDVNQYRDRHPCKSDKASKEANHL-YLIYMPLNNFSKEKE 975
Query: 329 LRTRLKMRISPSAEPT 376
L+T M+ A+P+
Sbjct: 976 LKTDASMKTDGMADPS 991
>At3g62620.1 68416.m07034 sucrose-phosphatase-related contains weak
similarity to sucrose-phosphatase [Arabidopsis thaliana]
gi|11127757|gb|AAG31075
Length = 358
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 242 TDNDVSARETEAVASATTFSRA--SPPEAKDLRTRLKMRISPSAEPTDAETL 391
T+ + S+ +A S +FS+ S + +D +++ + +ISPS+EP + ET+
Sbjct: 167 TEANASSPAKDATDSKVSFSKPTKSSSQVQDQKSKSQKKISPSSEP-ENETI 217
>At4g37250.1 68417.m05273 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 768
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 236 DVTDNDVSARETEAVASAT-TFSRASPPEAKDLRTRLKMRISPSAEPTDAE 385
D +ND ET+ + +T + S +SP E++ R +R P P++ E
Sbjct: 361 DNNNNDKQRTETDTITLSTFSSSSSSPEESRRFRKWSCLRKDPETTPSEEE 411
>At4g15180.1 68417.m02328 SET domain-containing protein contains Pfam
profile PF00856: SET domain
Length = 2326
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 215 ANSYCSSDVTDNDVSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEP-TDAETL 391
+ S SS+++DN S + A AS + S ++DLR S + T+
Sbjct: 1529 SESDTSSELSDNGKSDNYSSASASESESDIRSEGRSQDLRIEKYFTADDSFDSVTEEREW 1588
Query: 392 GTARTKLSRVPT*LTRR 442
G TK S VP +TR+
Sbjct: 1589 GARMTKASLVPP-VTRK 1604
>At3g58780.1 68416.m06551 agamous-like MADS box protein AGL1 /
shatterproof 1 (AGL1) (SHP1) identical to SP|P29381
Agamous-like MADS box protein AGL1 (Protein Shatterproof
1) {Arabidopsis thaliana}
Length = 248
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 424 DVADTTQMQGAEVISLDVSH--AAREVNDVYAPGRLQEPAYRHGGEDQP 564
D +++ +QG V VS ++ N Y P L EP + G+DQP
Sbjct: 195 DQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQP 243
>At1g67140.1 68414.m07638 expressed protein
Length = 2158
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 206 FDIANSYCSSDVTDNDVSARETEAVASATTFSRASPPEA 322
FD SYC + D++ S R+ A A + + PEA
Sbjct: 230 FDTLASYCVKGIEDSESSVRDAFAEALGSLLALGMHPEA 268
>At1g35420.1 68414.m04394 dienelactone hydrolase family protein low
similarity to dienelactone hydrolase [Rhodococcus
opacus] GI:23094407; contains Pfam profile PF01738:
Dienelactone hydrolase family
Length = 310
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 489 GRVTDVKADDFSSLHLRRVSYVGTRLNLVLA 397
GRV DV A D S VS+ GTR++ +A
Sbjct: 205 GRVVDVLATDESGYFSTGVSFYGTRIDSAVA 235
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,591,925
Number of Sequences: 28952
Number of extensions: 272264
Number of successful extensions: 770
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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