Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0129
         (403 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   0.49 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   2.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   3.4  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 158 LIYI*LVTHKNITYVNVKFFVDEYSFLYEL-LHLCKAFIICYSV 30
           LIYI ++  KN+T  N   F+ +  +L+ L + +     +C ++
Sbjct: 132 LIYIDMIIKKNVTQQNSDVFIFDNVWLFILWVGILSTIFLCDTI 175


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 122 TYV-NVKFFVDEYSFLYELLHLCKAFII 42
           TY+ +V  FV+EY    E+L++C   ++
Sbjct: 159 TYIFDVPNFVNEYVQAIEVLYICSYTVL 186


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 386 LIIQLFYPVNYYYV*DKVRHSIDLALITKILFYITYKLTLY 264
           L+I L Y +NY +   +    + L  +  +  Y  Y  T+Y
Sbjct: 118 LLINL-YTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVY 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,487
Number of Sequences: 336
Number of extensions: 1822
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)