Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0129
         (403 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-7|CAB00046.1|  208|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z48009-10|CAA88082.1|  331|Caenorhabditis elegans Hypothetical p...    27   5.0  
AL132943-2|CAC14392.1|  367|Caenorhabditis elegans Hypothetical ...    27   6.7  
U49944-1|AAA93415.3|  508|Caenorhabditis elegans Long protein 2 ...    26   8.8  
AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...    26   8.8  
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...    26   8.8  

>Z75712-7|CAB00046.1|  208|Caenorhabditis elegans Hypothetical
           protein K04G2.9 protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 298 YYFTLHINLLCIRVSYFC*IVSDYVSNIIYAVFFV 194
           Y+FTLH++ L     +FC   +D + N+I AV F+
Sbjct: 104 YFFTLHLSHL----DFFCWREADLLFNVICAVLFI 134


>Z48009-10|CAA88082.1|  331|Caenorhabditis elegans Hypothetical
           protein AH6.14 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 16  LIYSQTE*HIINALHRWSSSYRKEYSSTKNFTFT*VIFLC 135
           +I++QT   I      + +SYRK  S    F+ T ++F C
Sbjct: 115 MIFAQTGLMIERTCATFLASYRKRKSEIIGFSITIIVFFC 154


>AL132943-2|CAC14392.1|  367|Caenorhabditis elegans Hypothetical
           protein Y116F11B.5 protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 298 YYFTLHINLLCIRVSYFC*IVSDYVSNIIYAV 203
           YYF+  I+  C   + +  IVS+Y S++  AV
Sbjct: 95  YYFSFEISFECFPFASYSKIVSNYYSSMTNAV 126


>U49944-1|AAA93415.3|  508|Caenorhabditis elegans Long protein 2
           protein.
          Length = 508

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 18  NLFSNRITYYKRFTQMEQFI*K--RIFINKKLYIYISNIF 131
           N+ S + ++   F  +++ I    RIFI +K Y+Y  ++F
Sbjct: 280 NMTSTKKSFLDEFLSLKKTIFSVIRIFIERKSYVYAEHVF 319


>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 58  HRWSSSYRKEYSSTKNFTFT*VIFLCVTNYI*INNHG 168
           H+W+ +    +++T+ F FT + +L V  +  +  HG
Sbjct: 137 HKWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHG 173


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 58  HRWSSSYRKEYSSTKNFTFT*VIFLCVTNYI*INNHG 168
           H+W+ +    +++T+ F FT + +L V  +  +  HG
Sbjct: 137 HKWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHG 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,937,184
Number of Sequences: 27780
Number of extensions: 139902
Number of successful extensions: 236
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)