Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0128
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    24   1.5  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    24   1.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   6.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 458 LFSVTGENISFAISIDIQFYLRVTSSATSEDINLDYF 568
           L S T  +I      D   Y    + A  EDIN+DYF
Sbjct: 102 LSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYF 138


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 458 LFSVTGENISFAISIDIQFYLRVTSSATSEDINLDYF 568
           L S T  +I      D   Y    + A  EDIN+DYF
Sbjct: 102 LSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYF 138


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 660 GYSVPVSCGVKVNWLES 710
           GY  P S  +K++W++S
Sbjct: 344 GYEDPESVQIKMDWIKS 360


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 232 APKPYARWTRYRRRPSLCASSDSDNEHRGS 143
           AP+  +R T+     S  +S+D D+E R S
Sbjct: 122 APRTASRETKSSESDSGASSADPDDELRSS 151


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +2

Query: 113 EHTPLPSPVLRASMLII*V*RRAQGWSSPVAGPPCIGFRSTLPLLYINLFPARFHISPDR 292
           E +P P+P   A+ +       + G +SP A PP     S  P    +   A  HI   R
Sbjct: 8   EESPPPAPQSAATPI------SSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIPAKR 61

Query: 293 CS 298
            +
Sbjct: 62  AA 63


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 196  RRPSLCASSDSDNEHRGS 143
            RR S+ ASS  D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 196  RRPSLCASSDSDNEHRGS 143
            RR S+ ASS  D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 196  RRPSLCASSDSDNEHRGS 143
            RR S+ ASS  D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 196  RRPSLCASSDSDNEHRGS 143
            RR S+ ASS  D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,646
Number of Sequences: 336
Number of extensions: 4280
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)