Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0128
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    28   0.37 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   3.4  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 68  TDLSSPSTCTQNKRPEHTPLPSPV 139
           +D+SSP   T +  P+ TP P+PV
Sbjct: 168 SDMSSPGAPTGSSSPQITPRPTPV 191


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 229 PKPYARWTRYRRRPSLCAS 173
           P P +RW R+RRR  L  S
Sbjct: 3   PLPQSRWWRWRRRHLLTGS 21


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 476 LLSPKIKHMCNKLIKYWGVIAR*HSCSIKP 387
           LLS  IK   + +I  WG+I+    C  KP
Sbjct: 531 LLSKVIKPRLDCIIGKWGIISTAQKCCNKP 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,627
Number of Sequences: 2352
Number of extensions: 16618
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)