Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0128
(769 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 54 1e-07
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 54 1e-07
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 54 1e-07
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 54 1e-07
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 54 1e-07
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 33 0.28
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 33 0.28
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.85
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 31 1.1
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 6.0
At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family pr... 28 7.9
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 124 AQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 7 QPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 124 AQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 7 QPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 124 AQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 7 QPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 126 AQQPKLFVGMILILIFAEALALYGLIVGIIL 156
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 7 QPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVII 77
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 125 AQQPKLFVGMILILIFAEALALYGLIVGIIL 155
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 7 QPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVII 76
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 141 AQNSTLFVKILVIEIFGSALGLFGVIVGIIM 171
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 4 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+ PR+ ++ +IF E + +YG+IVAI L
Sbjct: 58 EAPRITSKNLISVIFCEAVAIYGVIVAIIL 87
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 1 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 139 AQNSTLFVKILVIEIFGSALGLFGVIVGIIM 169
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 4 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 93
+ PR+ ++ +IF E + +YG+IVAI L
Sbjct: 56 EAPRITSKNLISVIFCEAVAIYGVIVAIIL 85
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -2
Query: 225 NPMQGGPATGDDHPCARLQTQIMS---IEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQY 55
NP++ D HP + QI+ IE RST S S R VQVD +D +
Sbjct: 289 NPVESSDVETDKHPIESKEIQIVDKSVIEERSTSTAS---SSRFINVQVDDEDDDDADDW 345
Query: 54 FSENKNKNHS 25
++ + + S
Sbjct: 346 LNDEETSSVS 355
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 270 RAGNKLIYKSGRVLRNPMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGV 118
++ N + K +LR P G P P + +Q ++E +STG + V
Sbjct: 1455 QSNNSYVRKGNSLLRKPSHGSPGAALGIPPSAIQLNHFTVEDKSTGSSNMV 1505
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 62 VFTDLSSPSTCTQNKRPEHTPLPSP 136
+F L++ + C N P+H P+PSP
Sbjct: 18 IFFTLTAATDCGCNPSPKHKPVPSP 42
>At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 707
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 49 AEVL-GLYGLIVAIYLYXXXXXXXXXXXVARAPSLYAHYLSLKTRTGMVVAGSGSTLHRV 225
AE L GL L ++ Y R PS + LSL+ T V+ SG T RV
Sbjct: 209 AEYLDGLISLTTQMHEYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERV 268
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,097,930
Number of Sequences: 28952
Number of extensions: 339118
Number of successful extensions: 814
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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