Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0127
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 36 0.006
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 34 0.017
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.068
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.28
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.28
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 29 0.48
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 5.9
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 26 5.9
SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces ... 26 5.9
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 26 5.9
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 26 5.9
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 26 5.9
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 25 7.8
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 35.9 bits (79), Expect = 0.006
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = -1
Query: 379 KNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLK 200
++TEK + V L SS +Q T+ SR+ P PPA + P + +K
Sbjct: 221 ESTEKPLLSVSALSSSS--HLQPTSATS--SSSRLYPSRPAPTPPASSSSSPLLSSQTVK 276
Query: 199 PIKWTRPQLPPPLLMSQ-TKKLPR-NCPTLGTPLT-AVLYRPLARPRQSTTITLQSETAS 29
+ P PL+ S+ T + R + P L TP T + RP ST ++ET++
Sbjct: 277 TTTSNASRQPSPLVSSKSTDNIIRSHSPVLLTPQTLSTSETKHIRPNNSTPYQRRAETST 336
Query: 28 K 26
K
Sbjct: 337 K 337
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 34.3 bits (75), Expect = 0.017
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 286 PSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPP 164
P + +P L P+ P LP + +L P+ TRPQ+P P
Sbjct: 1035 PPTVSVPSPSALSPSVTPQLPPVSS-RLPPVSATRPQIPQP 1074
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.068
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
+TPP P+ P LPP+ P+LP + P L P LPP ++ LP P
Sbjct: 413 STPPVPT------PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA--PPLPAGMP 464
Query: 121 TL-GTPLTAVLYRPLARPRQSTTITLQSETASKAGR 17
P A P P + + +E + GR
Sbjct: 465 AAPPLPPAAPAPPPAPAPAPAAPVASIAELPQQDGR 500
Score = 31.1 bits (67), Expect = 0.16
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = -1
Query: 286 PSRIQTGNPVGLPPACRPALPTTCAPKLKPI----KWTRPQL--PPPLLMSQTKKLPRNC 125
P + + V PPA PA+P AP L P+ + + P + PP L S LP +
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 124 PTLGTPLTAVLYRPL 80
P P+ A PL
Sbjct: 436 PP-SLPMGAPAAPPL 449
Score = 29.1 bits (62), Expect = 0.64
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTL 116
PP P R + LPP R A P P+ P + + PPPL S+ P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSA-PPPPPPRSAP---STGRQPPPLSSSRAVSNPPAPPPA 394
Query: 115 GTPLTAVLYRPLARPRQSTT 56
+A PL +++T
Sbjct: 395 IPGRSAPALPPLGNASRTST 414
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPP 167
+ PP PS+ P LPP +PA P P + P +PP
Sbjct: 156 SAPPIPSKAPP-IPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 30.3 bits (65), Expect = 0.28
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = -3
Query: 254 SATSLSSSV---TDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*T 84
SA+S SSS + + + ++ STPI++S+ + +S + S GS+
Sbjct: 138 SASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSA 197
Query: 83 VGKTTPVHNNNVAVG 39
KT +N+ G
Sbjct: 198 DAKTVSASSNSTISG 212
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 29.5 bits (63), Expect = 0.48
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = -1
Query: 397 TMSNAVKNTEKTTVGVDCLHISSCV----TVQGLVVTTPPGPSRIQTGNPVGLPPACRPA 230
T S + +TE +T V +I+S V T TT P + + T V PP
Sbjct: 46 TTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTV--PPTTSLN 103
Query: 229 LPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVL 92
TT AP + T +PP ++ T +P PT T V+
Sbjct: 104 TTTTTAPPTTHVNSTTTVVPPTTHVNTTTVVP---PTTHVNTTTVV 146
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 43 TATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST*LASAWARTL 222
+AT WT + T+ + + SS A+ WS SS + + +T +++ T
Sbjct: 922 SATSSSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATA 981
Query: 223 SVT 231
SV+
Sbjct: 982 SVS 984
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 73 VLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST 192
VLPT T S VS SSL++F ST G +T
Sbjct: 244 VLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTT 283
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 5.9
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Frame = -1
Query: 244 ACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQ---TKKLP---RNCPTLGTPLTAVLYRP 83
A P +P T PK P PPP L Q T +LP RN LG+ + + P
Sbjct: 218 AVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVN--IPPP 275
Query: 82 LARPRQSTTITLQSETAS 29
A P Q + T S
Sbjct: 276 PATPSQPPRPPTNASTRS 293
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 313 GLVVTTPPGPSRIQTGNPVGLPPAC 239
G+VV G S ++ G+PV + P C
Sbjct: 71 GVVVEVGKGVSSLKPGDPVAVEPGC 95
>SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 201
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTV 317
TN+ ++ GS + + N +R+G++ + + KNT D SS V
Sbjct: 109 TNAAAIELTGSPIPSFLNRISRIGLAFPTITNALLQHGQKNTSDVD---DSSDSSSDVDE 165
Query: 316 QGLVVT 299
+ L+V+
Sbjct: 166 ETLIVS 171
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = -3
Query: 299 HPTWAQPDPNR*PCWSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSD 120
+P++ PD N S S SSS D R +E N + I D+ + K+LSD
Sbjct: 580 YPSYDLPDRNL----SEHSYSSSSDDEQRI-SELNDRELDEIDWQAADQDVENALKDLSD 634
Query: 119 TGNSIDGSV 93
+ GS+
Sbjct: 635 DNDFDTGSI 643
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -3
Query: 254 SATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 108
S TS+SSS ++N + +VDS P + V D K KE S+ G S
Sbjct: 368 STTSISSSPSENSDTSDDLTKVDS-PNKSLVNDNVSAKHDKE-SENGKS 414
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 286 PSRIQTGNPVGLPPACRPALPTTCAPKL 203
PS T P +P PALP+T AP L
Sbjct: 545 PSNTTTIAPSPVPTIIAPALPSTPAPPL 572
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 7.8
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = -1
Query: 253 LPPACRPALPTTCAPKLKPIKWTRPQLPP----PLLMSQTKKLPRNCPTLGTPLTAVLYR 86
LPP PA P + P +PP PL+ + T P + P + P TA +
Sbjct: 210 LPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNV-LPFTAAQHF 268
Query: 85 P 83
P
Sbjct: 269 P 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,180,890
Number of Sequences: 5004
Number of extensions: 73121
Number of successful extensions: 256
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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