Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0127
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 55 5e-08
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 51 1e-06
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 50 1e-06
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 50 2e-06
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 35 0.072
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 32 0.51
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 32 0.51
SB_40482| Best HMM Match : S-antigen (HMM E-Value=1.4e-05) 32 0.51
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 32 0.51
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 31 1.2
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 30 1.6
SB_49668| Best HMM Match : S-antigen (HMM E-Value=1.6e-08) 30 1.6
SB_44525| Best HMM Match : S-antigen (HMM E-Value=8e-06) 30 2.1
SB_27898| Best HMM Match : S-antigen (HMM E-Value=0.035) 30 2.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.1
SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7) 29 2.7
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 29 3.6
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.6
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.6
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 4.8
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 6.3
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 28 6.3
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 25 7.2
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 28 8.3
SB_47665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_40597| Best HMM Match : Dynein_heavy (HMM E-Value=0.55) 28 8.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 8.3
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 8.3
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 8.3
SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = +2
Query: 257 NRVTGLDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQ 430
NR+TGLDPA + + L+ + +V+ +HTD L G H DFYPNGG+ Q
Sbjct: 716 NRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTDMDLAGTPTVSGHIDFYPNGGKK-Q 774
Query: 431 PGCR--------VSTCSHSRAYELYASTV 493
PGCR C H RA E YA +V
Sbjct: 775 PGCRDLLDGPINYVICDHMRAPEYYAESV 803
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/76 (38%), Positives = 37/76 (48%)
Frame = +3
Query: 15 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHL 194
IR AL+ D NVI DW A Y A VG + + +L N G +L
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691
Query: 195 IGFSLGAHVVGNAGRQ 242
+GFSLGAH+ G GR+
Sbjct: 692 VGFSLGAHISGYVGRR 707
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 MIRPALLAVSDCNVIVVDWRGLANGL--YNTAVNGVPSVGQFLGNFLVWLINNGGGNWGR 185
++R LL NVI VDW+ A+GL Y+ A VG L + + + R
Sbjct: 43 VMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRR 102
Query: 186 VHLIGFSLGAHVVGNAGRQAGGR 254
VHLIG SLGAHV G AG + G+
Sbjct: 103 VHLIGHSLGAHVAGYAGERLSGK 125
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 272 LDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCRV 445
LDPAG + + L+ + +V+ +HTD G + H DFYPNGG+N QPGCR
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKN-QPGCRD 60
Query: 446 STCSHSRAYELYASTVRHNRFLADYVTTSIRLR 544
S A L VR + + + +T+ +R
Sbjct: 61 IADGPSNA--LKCDHVRAHDYFTESITSQCAMR 91
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 15 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLIN-NGGGNWGRVH 191
++ LL SD NVI+VDW A Y AV VG + F+ +++ +G G H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174
Query: 192 LIGFSLGAHVVGNAGRQ 242
IGFSLGAH+ G G++
Sbjct: 175 SIGFSLGAHISGYVGQR 191
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 257 NRVTGLDPAGPRWGGN--NQALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQ 430
+R+TGLDPA + G + L+R +V+ IHT + GI H DFYPNGG + Q
Sbjct: 200 DRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTSY-VFGITAPHGHMDFYPNGGTS-Q 257
Query: 431 PGC 439
GC
Sbjct: 258 RGC 260
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = +2
Query: 257 NRVTGLDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQ 430
+R+T LDPA + +++ L+ + +V+ IHT GI I H DFYPNGG+ Q
Sbjct: 218 DRITALDPAAMWFHKHHEDVRLDTSDALFVDVIHTSADY-GITSTIGHADFYPNGGKK-Q 275
Query: 431 PGC--------RVSTCSHSRAYELYASTV 493
PGC C H RA L+ +++
Sbjct: 276 PGCDNFFRGFSSYLFCGHKRAPALFTTSL 304
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/72 (41%), Positives = 34/72 (47%)
Frame = +3
Query: 27 LLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFS 206
LL D NVI+VDW A + AV VG L L G VH+IGFS
Sbjct: 138 LLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFS 197
Query: 207 LGAHVVGNAGRQ 242
GAHV G GR+
Sbjct: 198 FGAHVAGYVGRR 209
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
+TP PS G P+ P+ P+T + + P + P P L M T +P
Sbjct: 169 STPSTPSA--PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPS 226
Query: 121 TLGTPLT-AVLYRPLARPRQSTTIT 50
T TP T + L P+ ST T
Sbjct: 227 TPSTPSTPSTLSTPITPSTPSTPST 251
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
+TP PS G P+ P+ P+T + + P + P P L M T +P
Sbjct: 719 STPSTPSA--PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPS 776
Query: 121 TLGTPLT-AVLYRPLARPRQSTTIT 50
T TP T + L P+ ST T
Sbjct: 777 TPSTPSTPSTLSTPITPSTPSTPST 801
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 35.1 bits (77), Expect = 0.055
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = -1
Query: 295 PPGPSRIQTG--NPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
P GP+R +P+G PP+ P P P P P PPP+ + P P
Sbjct: 2153 PMGPARHSPSGPSPLGAPPSVPP--PMGAPPSGPPPMGAPPSGPPPMGTPPSGHPPMGAP 2210
Query: 121 TLGTPLTAVLYRPLARPRQSTTITLQSETASKAGR 17
+G P + + P R S T ++S K R
Sbjct: 2211 PMGPPPSG-SHSPAPRGTISQTCFMKSRIIDKRYR 2244
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 34.7 bits (76), Expect = 0.072
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKW-TRPQLPPP-LLMSQTKKLPRNCP 122
PP P+R +P P A +P P + AP IK+ +P +P P +M P P
Sbjct: 337 PPSPNRSPAASPAPSPSAVKPFHPVSSAP--SAIKFPAKPNVPAPGTIMPAPVSHPVASP 394
Query: 121 TLG-TPLTAVLYRPLARPRQSTTITLQSE 38
+ +P+ V P +TT+ QS+
Sbjct: 395 KVAQSPVRTVQVPGKPTPSVTTTLANQSK 423
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = -1
Query: 286 PSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTP 107
P ++ T P G PP RP P T P P + RP +PP S P P P
Sbjct: 574 PMQLPTSQPGGFPPQQRPGAPPTSQPGGFPPQ--RPGMPPMSQPSSMHMQPSGQPQSTAP 631
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -1
Query: 322 TVQGLVVTTPPG--PSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQ 149
TV VVT P P + T P +PP PTT P ++P + + PPP+ S+
Sbjct: 89 TVPPPVVTDAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVQPTEPPSTR-PPPIGESK 147
Query: 148 TKKL 137
K+L
Sbjct: 148 EKRL 151
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Frame = -1
Query: 322 TVQGLVVTTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRP-QLPPPLLMSQT 146
+V + T P P + T P +PP PTT P P+ P +PPP++
Sbjct: 55 SVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPP---PVVTDAPTTVPPPVVTDAP 111
Query: 145 KKLP----RNCPTLGTPLTAVLYRPLARP 71
+P + PT P P RP
Sbjct: 112 TTVPPPVVTDAPTTVPPPVQPTEPPSTRP 140
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
TTPPG + P P PTT P PP + TK P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Query: 121 TLGTPLTAVL 92
TP T L
Sbjct: 183 ATTTPTTRPL 192
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
TTPP + P P PTT P T PP + TK P
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPP 112
Query: 121 TLGTPLTAVLYRP--LARPRQSTTITLQSET 35
TP P P + TT T + T
Sbjct: 113 ATTTPTKPTTTTPPGTTTPTKPTTTTPPATT 143
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
TTPP + T P P PTT P PP + TK P
Sbjct: 81 TTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPP 140
Query: 121 TLGTPLTAVLYRPLA--RPRQSTTITLQSET 35
TP P A P + TT T + T
Sbjct: 141 ATTTPTKPTTTTPPATTTPTKPTTTTPPATT 171
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/81 (24%), Positives = 24/81 (29%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
TTPP + P P PTT P PP + TK P
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPP 168
Query: 121 TLGTPLTAVLYRPLARPRQST 59
TP + P A +T
Sbjct: 169 ATTTPTKSTTTTPPATTTPTT 189
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -1
Query: 235 PALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLA--RPRQS 62
P PTT P PP + TK P TP T P A P +
Sbjct: 47 PTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKP 106
Query: 61 TTITLQSET 35
TT T + T
Sbjct: 107 TTTTPPATT 115
>SB_40482| Best HMM Match : S-antigen (HMM E-Value=1.4e-05)
Length = 269
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T TT+
Sbjct: 222 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTTL 267
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 30 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 75
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 54 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 99
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 78 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 123
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 102 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 147
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 126 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 171
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 150 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 195
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 174 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 219
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 198 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 243
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 348 STPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
++PT+ F T LLMVT +P + T +A P L V + PP
Sbjct: 37 TSPTIPFLATTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSTLPPP 83
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 351 TPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
+PT+ F T LLMVT +P + T +A P L V + PP
Sbjct: 104 SPTIPFLATTTPLLMVTTSPLPSPTIPFLATTAPLLMVTTSPLPPP 149
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 354 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
PT+ F T LLMVT +P T +A P L V + PP
Sbjct: 149 PTIPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPP 193
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 354 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
PT+ F T LLMVT +P T +A P L V + PP
Sbjct: 171 PTIPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPP 215
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 354 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
PT+ F LLMVT +P T +A P L V + PP
Sbjct: 237 PTIPFLATTAPLLMVTTSPLPTPTIPFLATTTPLLIVTTSTLPPP 281
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 354 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
PT+ F T LLMVT +P + T +A P L V + P
Sbjct: 17 PTIPFLAATTPLLMVTTSPLTSPTIPFLATTTPLLMVTTSPLPSP 61
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 351 TPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPP 488
+PT+ F LLMVT +P T +A P L V + PP
Sbjct: 126 SPTIPFLATTAPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPP 171
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 31.5 bits (68), Expect = 0.67
Identities = 27/94 (28%), Positives = 42/94 (44%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 122
T G S + T PV PA RP P P + T+P +PPP L K + +C
Sbjct: 178 TETRGNSHLNTLPPV---PAHRPPQPVDVLPPPPKLAKTKP-VPPPRL-QVPKSILNDCE 232
Query: 121 TLGTPLTAVLYRPLARPRQSTTITLQSETASKAG 20
++ P L L+R + +T+ +S + +G
Sbjct: 233 SV-IPSKPDLTGTLSRQNKHSTVKEESHAQNSSG 265
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = -1
Query: 298 TPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPP 167
T P R+ P PP RP P P KP K T+P LPP
Sbjct: 784 TKPATPRVPPNIP-SRPPGARPTPPPP--PPGKPTKPTKPSLPP 824
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 15 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVG 125
+R ALL D NV++ DW A+G+Y A VG
Sbjct: 123 MRQALLQKDDVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRP---ALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLP 134
PPG + P GLPP P +LP P L P P+LP P L LP
Sbjct: 347 PPGNMSMPNHRPQGLPPGMPPMALSLPGMPPPGLLPPPGMPPRLPIPGLGLPGMPLP 403
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -1
Query: 301 TTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQT--KKLPRN 128
TTP PS T P+ P+ P P+ +KP T P P P S T K P
Sbjct: 1294 TTPIKPSPSTT--PIKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIKPSPST 1351
Query: 127 CPTLGTPLT 101
P +P T
Sbjct: 1352 TPIKPSPST 1360
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = -1
Query: 286 PSRIQTGNPVGLPPACRPALP---TTCAPKLKPIKWTRPQLPPPLLMSQT--KKLPRNCP 122
PS + + P+ P+ P P TT +KP T P P P S T K P P
Sbjct: 1246 PSSLISYKPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTP 1305
Query: 121 TLGTPLTAVLYRPLARPRQSTT 56
+P T + +P STT
Sbjct: 1306 IKPSPSTTPI-----KPSPSTT 1322
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 30.3 bits (65), Expect = 1.6
Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Frame = -1
Query: 301 TTPPGPSRIQT---GNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLL---MSQTKK 140
T PP P I P L +P PTT P L P R PPPLL +
Sbjct: 603 TPPPLPLSIPLLLQATPPHLQSTAQPR-PTT-VPPLPPTPPPRQSTPPPLLLIPLLPLLT 660
Query: 139 LPRNCPTL----GTPLTAVLYRP----LARPRQSTTITL 47
LP PT+ TPL + P +PRQST + L
Sbjct: 661 LPLPPPTVRHPQATPLPRLATHPPPLSTPQPRQSTALPL 699
>SB_49668| Best HMM Match : S-antigen (HMM E-Value=1.6e-08)
Length = 531
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV-GVD--CLHISSC 326
TNS +Q ST GTNS G ++T ++ T S A++ T T + G + L ++
Sbjct: 360 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTALQGTNSTALQGTNS 418
Query: 325 VTVQG 311
T+QG
Sbjct: 419 TTLQG 423
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 168 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 213
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 192 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 237
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 216 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 261
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 240 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 285
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 264 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 309
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 288 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 333
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 312 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 357
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 336 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 381
>SB_44525| Best HMM Match : S-antigen (HMM E-Value=8e-06)
Length = 264
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 2 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 47
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 26 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 71
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 50 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 95
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 74 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 119
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 98 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 143
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 122 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 167
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 146 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 191
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 170 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 215
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 194 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 239
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKT 362
TNS +Q ST GTNS G ++T ++ T S A++ T T
Sbjct: 218 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNST 261
>SB_27898| Best HMM Match : S-antigen (HMM E-Value=0.035)
Length = 185
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 2 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 47
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 26 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 71
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 50 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 95
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 74 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 119
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 98 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 143
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 496 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 356
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 122 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 167
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 298 TPPGPSRIQTGNPVGLPPACRPALPTTCAPKLK---PIKWTRPQLPPPLL-MSQTKKLPR 131
+PP P + +P PP P+ P A KL PI P LPPP L T +L R
Sbjct: 214 SPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPPTLGYLPTARLTR 273
Query: 130 NCPT 119
T
Sbjct: 274 ESVT 277
>SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7)
Length = 488
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 250 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGT 110
PPA +P L + PK+ I+ PPP L+ + +PRN T T
Sbjct: 437 PPAYKPQLKES--PKVNRIRDAHLLRPPPPLVRVAEDVPRNTDTSPT 481
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -1
Query: 250 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNC-PTLGTPLTAV-LYRPLA 77
PP PT C + P RP +PPP LPR C P T L Y P+
Sbjct: 44 PPPATALCPTPCYGPV-PHPLLRPCVPPPATALVPHPLPRPCAPPPATALCPTPCYGPVP 102
Query: 76 RP 71
P
Sbjct: 103 HP 104
>SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 265 NPVGLPPACRPALPTTCAPKLKP 197
NP G P ACR L TC+P P
Sbjct: 461 NPPGHPQACRLTLAATCSPSQGP 483
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 428 GGFCHRWGKSHHEQCGQ----KYREDHRRCG 348
GG C R+G H QC + K+ E+H CG
Sbjct: 256 GGLCSRFGTQHSCQCARGYSGKHCEEHSPCG 286
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/85 (31%), Positives = 35/85 (41%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTL 116
PP P+ I + P+ LPP P PT P K P PPP +S + P+
Sbjct: 687 PPLPTPIASSEPLPLPP---PPPPTGIDIPHSPSKDDLPLPPPPEEVSLPPP-DESPPSS 742
Query: 115 GTPLTAVLYRPLARPRQSTTITLQS 41
P T A PR ST ++ S
Sbjct: 743 KHPPTVSPSSSSAPPRPSTPPSVSS 767
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 292 PGPSRIQTGNPVGLP-PACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQ 149
PGP P G+P P P +PT ++ + T P +PPP + +Q
Sbjct: 47 PGPPPAMYAVP-GMPMPPAYPGMPTYPPQPMQFLPGTLPGMPPPPMFAQ 94
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -1
Query: 250 PPACRPALPTTCAPKLKPIKWTR---PQLPPPLLMSQTKKLPRNCPTLGTPL--TAVLYR 86
PP+ +P++P K P +R P LPPP + P P +G P+ A++ R
Sbjct: 246 PPSVKPSVPIPPPTKPPPRVASRRPPPPLPPPDSSEAQAQQPPLSPPVGKPVVPAALMNR 305
Query: 85 PLARPRQ 65
P R+
Sbjct: 306 PTRGERR 312
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 HEP*SAPPCWPSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTT-EAAIG 180
HE +AP +P T++ T VV T+ TT+ + +++LA + ++T E I
Sbjct: 328 HEATAAPATTTAPETTVITETSVVPETLKTTMAAETTSAPETTLAPESTENATAPETTIA 387
Query: 181 VEST 192
E+T
Sbjct: 388 PETT 391
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRPALPTTCA-PKLKPIKWTRPQLPPP 164
PP P G G PP P LP A P PI P PPP
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 286 PSRIQTGNP-VGLPPACRPALPTTCAPKLKPIKWTRPQLPPP---LLMSQTKKLPRNCPT 119
PSR Q+ NP PP+C+ P P + T+P PP + QT L + P
Sbjct: 83 PSR-QSNNPRPHTPPSCQSNTPRPLTPPPRQSNTTQPPAYPPRQSYALQQTTPLHTSQPL 141
Query: 118 LGTP 107
TP
Sbjct: 142 RPTP 145
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 144 LVWLINNGGGNW-GRVHLIGFSLGAHVVGNAG 236
LV +N GN +IGFSLG HV G AG
Sbjct: 4 LVKFLNKQTGNTPSSFTVIGFSLGGHVAGYAG 35
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 113 NSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADHGSC 3
N+ S+ TV T +N A +GG+DHG+C
Sbjct: 444 NASPSSLGRTVESLTARESNTDATAQAARGGSDHGTC 480
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 304 VTTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKP 197
VT PP T PV PP +P P T +P+ +P
Sbjct: 51 VTQPPVTQPPVTQPPVTQPPVTQPPPPVTQSPEQEP 86
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 24.6 bits (51), Expect(2) = 7.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 238 RPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPR 131
RPAL AP KP TRP PP + K+ +
Sbjct: 106 RPALSANPAPTEKPEPTTRPS-PPTQKQADKPKISK 140
Score = 21.8 bits (44), Expect(2) = 7.2
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -1
Query: 274 QTGNPVGLPPACRPALPTTC 215
Q NP G P C P C
Sbjct: 76 QYSNPAGCAPECAPTNTPEC 95
>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 869
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -1
Query: 313 GLVVTTPPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPPL 161
G+VV PP I + +P P L P P++++ P PL
Sbjct: 318 GMVVLPPPPMEAIDFTSSADVPSPIPPPLDFATPPMAPPVEFSDESSPKPL 368
>SB_47665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 408 PT-VAETPNRVAELVPALTVEPTNCTPPLFV 497
PT V +TP + +VP LT E +CTPPL V
Sbjct: 47 PTRVRQTPMTSSSMVP-LTWEKHHCTPPLSV 76
>SB_40597| Best HMM Match : Dynein_heavy (HMM E-Value=0.55)
Length = 403
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -1
Query: 502 IVTNSGGVQFV--GSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISS 329
+ TN+ G + +TV A T AT VSA V A TVG + L ++
Sbjct: 154 VATNTVGANSLVATNTVNAHTLLATNT-VSANSLVATNTVGANSLVATNTVGANSLVATN 212
Query: 328 CVTVQGLVVTTPPGPSRIQTGNPVG 254
V LV T G + + N VG
Sbjct: 213 TVGANSLVATNTVGANSLVATNTVG 237
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPP 164
PP PSR Q P PP R + P KP TR PPP
Sbjct: 320 PPPPSRDQVPLP---PPPLRGQIAPPPPPISKPPTSTRSAPPPP 360
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = -1
Query: 388 NAVKNTEK-TTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGLPPACRPALPTTCA 212
NA N++ TTV T T P + + TG P+G P + T A
Sbjct: 43 NATTNSQNITTVAPITTMAPDTTTAAPFTTTIAPATTALPTGTPIGTPTGIPTGILTGTA 102
Query: 211 PKLKP 197
+ P
Sbjct: 103 SQATP 107
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 295 PPGPSRIQTGNPVGLPPACRPALPTTCAPKLKPIKWTRPQLPPP 164
PP PSR Q P PP R + P KP TR PPP
Sbjct: 232 PPPPSRDQVPLP---PPPLRGQIAPPPPPISKPPTSTRSAPPPP 272
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 265 NPVGLPPACRPALPTTCAPKLKPI--KWTRPQLPPPLLMSQTKKLPRNCPTLGT 110
+P G PPA PA P P + + T P PPP+ M+ +P C T+ T
Sbjct: 167 SPPGPPPAPMPAPPPMVVPSHRHVFHHVTHP-APPPMQMAPAPCMP-PCHTVQT 218
>SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 288
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 190 WTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQS 62
WT PQ PP+ ++ + P P P+ + R RQS
Sbjct: 65 WTAPQQDPPVDSARARSPPWTAPEPNPPVDSARARSFRGQRQS 107
>SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -1
Query: 187 TRPQLPPPLLMSQTKKL---PRNCPTLGTPLTAVLYRPLAR 74
T+ PPL + KL PR CPT G PL VL RP R
Sbjct: 15 TKAGTGPPLEVDGIDKLDAMPRKCPTPGDPL--VLERPPPR 53
>SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 423 TPNRVAELVPALTVEPTNCTPPLFVTI 503
TPN +A L P +T CTP + +I
Sbjct: 2 TPNHIATLYPCMTKRLPTCTPVILPSI 28
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,619,398
Number of Sequences: 59808
Number of extensions: 645384
Number of successful extensions: 2451
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2342
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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