Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0126
(518 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 132 2e-32
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 132 2e-32
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 79 4e-16
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 67 2e-12
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 42 4e-05
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.059
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.42
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 1.3
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 2.2
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 2.2
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 2.9
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 3.9
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 26 3.9
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 5.1
SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr ... 25 6.8
SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 25 9.0
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 25 9.0
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 9.0
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 25 9.0
SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subuni... 25 9.0
SPAC23H4.08 |||RNA polymerase II associated protein |Schizosacch... 25 9.0
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 132 bits (320), Expect = 2e-32
Identities = 63/81 (77%), Positives = 68/81 (83%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
KLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVS
Sbjct: 503 KLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVS 562
Query: 192 YRETVAEESDQLCLSKSPNKH 254
YRE+V+E S LSKSPNKH
Sbjct: 563 YRESVSEPSSMTALSKSPNKH 583
Score = 117 bits (282), Expect = 9e-28
Identities = 55/94 (58%), Positives = 71/94 (75%)
Frame = +2
Query: 224 ALSLKVAQQAHRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKI 403
ALS K + +R+FM A+PM + L I+ G VNPRDDFK RAR + +++ +DVT+ARKI
Sbjct: 575 ALS-KSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKI 633
Query: 404 WCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGF 505
WCFGP+ TG N++VD +K V YLNEIKDSVVA F
Sbjct: 634 WCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAF 667
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 132 bits (320), Expect = 2e-32
Identities = 63/81 (77%), Positives = 68/81 (83%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
KLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVS
Sbjct: 503 KLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVS 562
Query: 192 YRETVAEESDQLCLSKSPNKH 254
YRE+V+E S LSKSPNKH
Sbjct: 563 YRESVSEPSSMTALSKSPNKH 583
Score = 117 bits (282), Expect = 9e-28
Identities = 55/94 (58%), Positives = 71/94 (75%)
Frame = +2
Query: 224 ALSLKVAQQAHRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKI 403
ALS K + +R+FM A+PM + L I+ G VNPRDDFK RAR + +++ +DVT+ARKI
Sbjct: 575 ALS-KSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKI 633
Query: 404 WCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGF 505
WCFGP+ TG N++VD +K V YLNEIKDSVVA F
Sbjct: 634 WCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAF 667
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 79.0 bits (186), Expect = 4e-16
Identities = 40/76 (52%), Positives = 49/76 (64%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
KLV GL L ++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V
Sbjct: 578 KLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVP 637
Query: 192 YRETVAEESDQLCLSK 239
YRET D L +K
Sbjct: 638 YRETTIATPDLLAKNK 653
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +2
Query: 332 DDFKTRARYLTEKYEYDVTEARK----IWCFGPEGTGPNILVDCSK 457
+ F R L E+ D+ E + I FGP+ GPNIL D +K
Sbjct: 724 EKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTK 769
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 66.9 bits (156), Expect = 2e-12
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
KL++GL++ KS P+ EESGEH + G GE++++ L DL ++ I I+ SDPV
Sbjct: 615 KLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVAR 674
Query: 192 YRETVAEESDQLCLSKSPNK 251
+ ET + S C S +PNK
Sbjct: 675 FCETAVDTSSIKCFSDTPNK 694
Score = 60.5 bits (140), Expect = 1e-10
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 HRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGP 433
+R+ M +P+ G+ DI+ G+VN K + + + Y++D+ +R IW FGP+ G
Sbjct: 696 NRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGT 755
Query: 434 NILVDCSKGV----QYLNEIKDSVVAGFQ 508
NIL D + LN +K+ + GFQ
Sbjct: 756 NILRDDTLSTDVDKNVLNSVKEYIKQGFQ 784
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 42.3 bits (95), Expect = 4e-05
Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 21 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 197
+ L R + DP + ++ ES E I++G GELHLE+ ++ + ++ + + P V++R
Sbjct: 492 KALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFR 550
Query: 198 ETVAEE 215
ET++++
Sbjct: 551 ETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.9 bits (69), Expect = 0.059
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 15 LVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
L+E L + + DP + + E+G+ ++ G G +HL++ + L + V
Sbjct: 460 LLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVG 518
Query: 192 YRETVAEESDQLCLSKSPNKHTV 260
YRET+ + S + NK +
Sbjct: 519 YRETLIDVSFNSVTLSTENKENL 541
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.42
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 214 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 47
S T YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 120 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 251
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 305 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 442
++E + R+ + Y + + VT ++ + FGP GTG +L
Sbjct: 502 LEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 421 LGAKAPNLTGFGNIIFVLFCKIPSAS 344
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 293 LPEDIDEGRVNPRDDFKT 346
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 389 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 478
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 159 IPIKKSDPVVSYRETVAEESDQLCLSKSPNKHTVCS*RLSPCLMVCQRTLMRVA*IPAMT 338
+P+ +D VV + E + L K PN + S ++ + + L A +PAM
Sbjct: 417 LPLSYTDEVVKFIEKNTQ-GHSLESKKEPNLESQSSNKIKTTIFPVSQLLFSNANVPAMC 475
Query: 339 SRL 347
RL
Sbjct: 476 QRL 478
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -2
Query: 112 SSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 20
S+ +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = -2
Query: 286 RHGLSLHEQTVCLLGDFE----RQSWSDSSATVSRYDTTGSD-FLIGMQAWSSSRSLRQI 122
+H LH Q +C+ G FE R + S + Y S G+Q + S + +
Sbjct: 15 KHTTLLHNQFLCIKGPFEKFVGRYIYKYISILIYLYSFFSSGVHTRGIQFYRVSAVMELL 74
Query: 121 SRWSSPAPATM 89
+W+ A A +
Sbjct: 75 QQWTQQAKAAL 85
>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 174 SDPVVSYRETVAEESDQLCLSKSPNKHTVCS 266
+D + S + EE+D L + P K+T S
Sbjct: 43 NDRLTSLKNNFVEENDNAVLKEEPGKYTYMS 73
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 505 ESSHNRVLNFIEVLNSFG 452
ESS N++LN E N FG
Sbjct: 421 ESSENKMLNLFEDYNEFG 438
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 54 MVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIK 170
M + IN +S + +E CL L+E H +P++
Sbjct: 1 MKEMINLDSSSEPSIVTKQFSVEECLSKLKEQHCYVPMR 39
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 417 GPKHQILRASVTSYSYFS 364
G KH +LRA+ +Y YFS
Sbjct: 318 GHKHLLLRAANIAYHYFS 335
>SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subunit
Mmm1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 435 LGPVPSGPKHQILRASVTSYSYFS 364
L P P G KHQ+L YFS
Sbjct: 230 LHPSPGGLKHQVLNRITVIMIYFS 253
>SPAC23H4.08 |||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 24.6 bits (51), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 27 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIP-IKKSDPVV---SY 194
L + K D IN+ES E +H + L++++ IP ++ S+ VV ++
Sbjct: 47 LSQTLKQDDRYIQINDESSEPTHEDVRNIHSHTKISSLKKNNYGIPVVQTSEDVVKAPTH 106
Query: 195 RETVAEESDQLCLSKSPNKHTV 260
+ + E+ + LS S ++T+
Sbjct: 107 MDLGSRENTKGILSFSSPRYTI 128
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 30 KRLAKSDPMVQCINEESGEHIVAGAGEL 113
KR A + +V C+NE E +A A EL
Sbjct: 83 KRAAIAQQLVNCVNELFYEEALARAAEL 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,280,939
Number of Sequences: 5004
Number of extensions: 47934
Number of successful extensions: 173
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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