Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0126
(518 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 152 2e-37
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 5e-15
SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15) 54 7e-08
SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6) 29 1.7
SB_7387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_28265| Best HMM Match : Ank (HMM E-Value=6.3e-20) 28 4.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 28 5.3
SB_48289| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17) 27 7.0
SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17) 27 7.0
SB_25454| Best HMM Match : zf-A20 (HMM E-Value=7.5) 27 7.0
SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2) 27 7.0
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_48209| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.1e-05) 27 9.3
SB_38648| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_34005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20) 27 9.3
SB_39837| Best HMM Match : Ion_trans (HMM E-Value=8.5e-12) 27 9.3
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 9.3
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 152 bits (368), Expect = 2e-37
Identities = 69/81 (85%), Positives = 76/81 (93%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
KLVEGL RLAKSDPMVQ EESGEHIVAGAGELHLEICLKDLEEDHACIP+KKS+PVVS
Sbjct: 493 KLVEGLNRLAKSDPMVQSFTEESGEHIVAGAGELHLEICLKDLEEDHACIPLKKSEPVVS 552
Query: 192 YRETVAEESDQLCLSKSPNKH 254
YRE V+++S+Q+CLSKSPNKH
Sbjct: 553 YRECVSDKSNQMCLSKSPNKH 573
Score = 139 bits (336), Expect = 1e-33
Identities = 65/92 (70%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 KVAQQAHRLFMKAQPMPDGLPEDIDEG-RVNPRDDFKTRARYLTEKYEYDVTEARKIWCF 412
K + +RLFM A P+ + LPEDID+G +NPR DFK RARYL + Y +DV EARKIW F
Sbjct: 568 KSPNKHNRLFMTAGPLEEKLPEDIDDGCEINPRQDFKIRARYLADTYGWDVNEARKIWSF 627
Query: 413 GPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQ 508
GPEGTGPN+LVD SKGVQYLNEIKDSVVAGFQ
Sbjct: 628 GPEGTGPNLLVDVSKGVQYLNEIKDSVVAGFQ 659
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 77.8 bits (183), Expect = 5e-15
Identities = 34/80 (42%), Positives = 56/80 (70%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 191
K+++GL+++ KS P++ EESGEH++ G GEL+L+ + DL ++ I IK +DPV++
Sbjct: 470 KMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCIMHDLRRMYSEIDIKVADPVIA 529
Query: 192 YRETVAEESDQLCLSKSPNK 251
+ ETV E S C +++PNK
Sbjct: 530 FCETVVETSSLKCFAETPNK 549
Score = 73.7 bits (173), Expect = 8e-14
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 HRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGP 433
+++ M A+P+ GL EDI+ +V + K + KY++D+ AR IW FGPE TGP
Sbjct: 551 NKVTMIAEPLEKGLAEDIENEKVLISWNKKKLGEFFQTKYDWDLLAARSIWAFGPENTGP 610
Query: 434 NILVD----CSKGVQYLNEIKDSVVAGFQ 508
NILVD LN +KDS++ GFQ
Sbjct: 611 NILVDDTLPSEVDKSLLNTVKDSIIQGFQ 639
>SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15)
Length = 549
Score = 54.0 bits (124), Expect = 7e-08
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 84 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 206
EH++ AGE+HL+ C+ DL+ +AC+ + SDP++ +RETV
Sbjct: 2 EHVIIAAGEVHLQRCVDDLKRRYACVELNVSDPIIPFRETV 42
Score = 34.3 bits (75), Expect = 0.061
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 392 ARKIWCFGPEGTGPNILVD 448
A IW FGP GTGPNIL++
Sbjct: 179 ADHIWAFGPRGTGPNILLN 197
>SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 31.5 bits (68), Expect = 0.43
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 21 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEI 125
+ + R + DP + ++ES E I++G GELHL++
Sbjct: 42 KAINRFTREDPTFRVRFDDESKETIISGMGELHLDV 77
>SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6)
Length = 160
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 51 PMVQCINEESGEHIVAGAGELHLEICLKDLEE 146
P Q + E EH+VA +G+L E C K L +
Sbjct: 26 PTWQRVKEFQNEHLVAQSGKLRFEACKKTLSK 57
>SB_7387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +3
Query: 39 AKSDPMVQ---CINEESGEHIVAGAGELHLEICLKDLEEDH 152
AK DP + C NE+SGEH + GE +L I ++ +++D+
Sbjct: 7 AKIDPNLGTRICFNEDSGEH-YSCHGEENLAISMEGMDKDY 46
>SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = -2
Query: 277 LSLHEQTVCLLGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAP 98
LSL + L+G S S + +S + D + G+ W ++RS++ + + P+
Sbjct: 150 LSLFCNVLLLIGKIVASYLSGSLSIISSLVDSAVDLVSGIIFWYTTRSIKTTNFYEYPSG 209
Query: 97 ATMCSPDSSLI 65
T P + +I
Sbjct: 210 KTRLEPVAVII 220
>SB_28265| Best HMM Match : Ank (HMM E-Value=6.3e-20)
Length = 165
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 12 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLK 134
++V+ L A DP + +N S H A G+LH CLK
Sbjct: 119 EVVKWLVEKANCDPGAKTLNRMSAIHFAASGGDLH---CLK 156
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 327 PAMTSRLALGILQKSTNMMLPKPVRFGALAPRVPA 431
PA + GI++ ST ++P P+R + P VPA
Sbjct: 1109 PAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPA 1143
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 4/22 (18%)
Frame = +2
Query: 278 PMPDGLPEDIDEGR----VNPR 331
P+PDG+ E+IDEG+ +NPR
Sbjct: 721 PVPDGIYEEIDEGQIYDIINPR 742
>SB_48289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3
Query: 429 PVPSGPKHQILRASVTSYSYFSVRYRARVLKSS 331
P P GP LR S S++ FS YR+RVL SS
Sbjct: 241 PWPEGPVTG-LRPSGKSWASFSPGYRSRVLGSS 272
>SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17)
Length = 809
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 260 LFMKAQPMPDGLPEDIDEGRVNPRD 334
LF K + +P L ED++EG V D
Sbjct: 255 LFCKTKKLPVALSEDLEEGEVTEED 279
>SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17)
Length = 232
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 260 LFMKAQPMPDGLPEDIDEGRVNPRD 334
LF K + +P L ED++EG V D
Sbjct: 57 LFCKTKKLPVALSEDLEEGEVTEED 81
>SB_25454| Best HMM Match : zf-A20 (HMM E-Value=7.5)
Length = 320
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -2
Query: 265 EQTVCLLGDFERQSWSDSSATVSRYDTTGSDFLIGM--QAWSSSRSLRQISR 116
EQ LL F+R W+ T +YDT G D G+ W R R + R
Sbjct: 165 EQAERLLPAFKR--WATFRRTYPQYDTGGEDPYFGVLCPEWGCQRRFRHLVR 214
>SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2)
Length = 1037
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 242 AQQAHRLFMKAQPMPDGLPEDIDEGRVNPR 331
AQ+ L A+ +P +P D D GR NP+
Sbjct: 636 AQRRRSLAHSARSLPGSMPSDRDLGRKNPQ 665
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 265 EQTVCLLGDFERQSWSDSSATVSRYDTT--GSDFLIGMQAWSSSR-SLRQISRWSSPAPA 95
+ T + D E S+ DSS SR+ +T GS L G R + ++ R SS +
Sbjct: 531 DTTSTMSSDIETTSYMDSSDDQSRFSSTTEGSHLLSGRHRRRRRRPRMPRVQRCSSFSTI 590
Query: 94 TMCSPDSSLIHCTMGSD 44
T + ++I T+ D
Sbjct: 591 TESTMSLNIITITLNMD 607
>SB_48209| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.1e-05)
Length = 974
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +3
Query: 66 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCL 233
+N + GE V G E +C + + DH C D + R + ++ D + L
Sbjct: 199 VNRKEGEEHVCG--EYKCSVCKEVVPPDHLCYVTVGGDALPKKRNSADDDDDSMRL 252
>SB_38648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 48 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 215
D V+ + G H ++G+GE LE + L E + KK + + +RE V E
Sbjct: 293 DDSVEFDQQRGGTHFISGSGETQLERERRVLTERELKLK-KKLEALRKHREHVRHE 347
>SB_34005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 283 HGLSLHEQTVCLLGDFERQSWSDSSATVSRYDT 185
H SL + C L ERQS D V YDT
Sbjct: 231 HTKSLKRKHSCKLSSAERQSMCDDGGQVYYYDT 263
>SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20)
Length = 918
Score = 27.1 bits (57), Expect = 9.3
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 462 TPLEQSTRMLGPVPSGPK 409
TP+E+ T+++GP P P+
Sbjct: 14 TPVEEETKLIGPTPVAPQ 31
>SB_39837| Best HMM Match : Ion_trans (HMM E-Value=8.5e-12)
Length = 622
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 487 VLNFIEVLNSFGAIHQ-DVGAGTLGAKAPNLTGFGNIIFVLFCKIPSASLEVIAGI 323
VL + + G + + V GTL P +T +G I+F+L+ +E+ G+
Sbjct: 287 VLRVLRLAKIIGQVRRFQVIIGTLMQIGPAITTYGAIMFILYYIYAIVGIELFGGL 342
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 148 TMLAFQSRSLTLSCRTVRP*L--RNRTSSVSQSRPTS 252
T+ SR +TLSC+T R + RN +S V+ +R TS
Sbjct: 1282 TLSCNTSRDVTLSCKTSRGVILARNTSSGVTLTRNTS 1318
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,760,938
Number of Sequences: 59808
Number of extensions: 395489
Number of successful extensions: 1140
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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