Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0126
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    28   0.066
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.62 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   1.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 0.066
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 413 GPEGTGPNILVDCSKGVQYLNEIKDSVVA 499
           GP   GP+ ++D + GV Y  +I  + +A
Sbjct: 294 GPNSQGPSSVIDTNTGVDYFTQINRNGIA 322


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 481 NFIEVLNSFGAIHQDVGAGTLGAKAPNLTGFGNIIFV 371
           +F   +   G  H  V AG +GA+ P+   +GN + V
Sbjct: 888 SFNHFVLKMGINHGPVTAGVIGARKPHYDIWGNTVNV 924


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 441 RMLGPVPSGPKHQILRASVTSYSYFSVRY 355
           R   P+P  P H +L A+V   S +  RY
Sbjct: 76  RFRKPLPIEPWHGVLNATVLPNSCYQERY 104


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 441 RMLGPVPSGPKHQILRASVTSYSYFSVRY 355
           R   P+P  P H +L A+V   S +  RY
Sbjct: 76  RFRKPLPIEPWHGVLNATVLPNSCYQERY 104


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 275 QPMPDGLPEDIDEGRVNPR 331
           +P+P+ L ED+   +V PR
Sbjct: 20  KPLPENLKEDLIVYQVYPR 38


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 31  NVWLNLTPWCSV 66
           N WL  T WC V
Sbjct: 110 NRWLFTTDWCDV 121


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 275 QPMPDGLPEDIDEGRVNPR 331
           +P+P+ L ED+   +V PR
Sbjct: 20  KPLPENLKEDLIVYQVYPR 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,225
Number of Sequences: 438
Number of extensions: 3199
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)