Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0124
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   2.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   2.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   2.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   2.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   2.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   2.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   2.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   2.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   2.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.7  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   5.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 80  RSTPPLSTPSN 90


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   RATPPASAPSN 38
           R+TPP S PSN
Sbjct: 124 RSTPPLSTPSN 134


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 425 TDFCPDLLMRNNTCFIYKHSLQFEN 499
           T +   L+  NN+ F+ ++S +F+N
Sbjct: 357 TTYLVILIQFNNSDFVQRNSTEFDN 381


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 102 LRPQ*TLLKEKSKFSTVN*PQTLLEESPCPT 194
           ++PQ T + +++  ST+N  + LL +  C T
Sbjct: 23  VKPQLTRISDEAIESTLNDRRYLLRQLKCAT 53


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 324 SDLTPEQVQLDFRVDF 277
           +DLTPEQ+Q     DF
Sbjct: 222 TDLTPEQIQAAEVKDF 237


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 180 IPPEASAVSLRSKIWTSPSAASI 112
           IPPE  + SL +    SPS+ ++
Sbjct: 317 IPPEPISASLSTSNSNSPSSTNL 339


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 180 IPPEASAVSLRSKIWTSPSAASI 112
           IPPE  + SL +    SPS+ ++
Sbjct: 106 IPPEPISASLSTSNSNSPSSTNL 128


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 180 IPPEASAVSLRSKIWTSPSAASI 112
           IPPE  + SL +    SPS+ ++
Sbjct: 106 IPPEPISASLSTSNSNSPSSTNL 128


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 150 RSKIWTSPSAASIEAATEFK 91
           R  ++ SP+A +   ATE+K
Sbjct: 103 RKGLFWSPAATAAATATEYK 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,150
Number of Sequences: 336
Number of extensions: 1725
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)