Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0124
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50016-8|CAA90315.1|  393|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U40421-2|AAA81438.1|  453|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z75955-7|CAB00121.1|  550|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC024882-4|AAF60933.2|  338|Caenorhabditis elegans Seven tm rece...    27   8.0  

>Z50016-8|CAA90315.1|  393|Caenorhabditis elegans Hypothetical
           protein T21C12.2 protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3

Query: 220 DNSTSANAHVGHGDSSRSVCGQFTVENLD 134
           DNS   N  V HGD  + VC  F VE+LD
Sbjct: 77  DNSELGNHLVQHGDGVKDVC--FEVEDLD 103


>U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical
           protein C06A5.3a protein.
          Length = 780

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -1

Query: 450 IRRSGQKSVDDVFGDVLQNPADLXXXXXXXXXXXXXXVADASSD--LTPEQVQ--LDFRV 283
           I  SG   V D+F ++  NP D+               +D S D  L+PE +   L   V
Sbjct: 274 ISLSGFSGVSDMFDELFNNPGDIDSHADQLMLTLNNMPSDGSIDRPLSPEMLNPILQAAV 333

Query: 282 DFSNR 268
           +F +R
Sbjct: 334 EFCDR 338


>U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical
           protein C06A5.3b protein.
          Length = 783

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -1

Query: 450 IRRSGQKSVDDVFGDVLQNPADLXXXXXXXXXXXXXXVADASSD--LTPEQVQ--LDFRV 283
           I  SG   V D+F ++  NP D+               +D S D  L+PE +   L   V
Sbjct: 274 ISLSGFSGVSDMFDELFNNPGDIDSHADQLMLTLNNMPSDGSIDRPLSPEMLNPILQAAV 333

Query: 282 DFSNR 268
           +F +R
Sbjct: 334 EFCDR 338


>U40421-2|AAA81438.1|  453|Caenorhabditis elegans Hypothetical
           protein C02B8.5 protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 398 WSTSPNTSSTDFCPDLLMRN 457
           WST  NT+S D CP  L  N
Sbjct: 76  WSTMYNTASKDVCPTALRSN 95


>Z75955-7|CAB00121.1|  550|Caenorhabditis elegans Hypothetical
           protein R07B7.12 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 226 DSDNSTSANAHVG--HGDSSRSVCGQFTVENLDFSFSSVY*GRNRIQAQGQVKL 71
           DS+ +  A  H+   +G  + SV  +  ++ LDF F +VY  +N I  +  +K+
Sbjct: 416 DSELNKDAPIHLPIIYGTETESVIREMDLKTLDFDFQTVY--QNPIYREAALKM 467


>AC024882-4|AAF60933.2|  338|Caenorhabditis elegans Seven tm
           receptor protein 158 protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = +3

Query: 357 LQLRKIPIPGQPGFGVRLRIHHQQTSVQTF*CAIIPVLFINIAYNSKIKCSLLK 518
           L+++ +   G+  F  RL++   +  +  F   +IP+LF+ +  ++ I C L K
Sbjct: 228 LKIKNLNSQGESEFSKRLQVQLYKALIAQF---LIPMLFLFLPTSTFISCPLFK 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,630,729
Number of Sequences: 27780
Number of extensions: 164375
Number of successful extensions: 543
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)