Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0119
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.84 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.84 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 462 LFIL*TEYFNSLFASRPFRW*RTNKNLDVTTINKNLRPVPILQK 593
           L +  T +FN LF  +     +    +D T  +K L+PV I  K
Sbjct: 80  LLVFLTYFFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIRTK 123


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 462 LFIL*TEYFNSLFASRPFRW*RTNKNLDVTTINKNLRPVPILQK 593
           L +  T +FN LF  +     +    +D T  +K L+PV I  K
Sbjct: 76  LLVFLTYFFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIRTK 119


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 565 FLFIVVTSRFLLVRYHRNGRDAKRLLKYSVYNI 467
           FLF+++   +L + +    R   R+LKY +  I
Sbjct: 16  FLFLLICDSYLKIYHKEKYRKFCRILKYFIIAI 48


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 197 FIMICVP*ETSSNNKI 150
           F  ICVP  TS+NN++
Sbjct: 22  FCAICVPKITSTNNEV 37


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 414 IYFLHLVYLFALIRLGLFIL 473
           +YFL +++LF +I L + ++
Sbjct: 236 LYFLTIIFLFFIIPLIILLI 255


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 299 VEKYYLLYLQFVKPNLSNTNLILT 228
           V  Y ++++QF + + S  N +LT
Sbjct: 374 VTTYLVIFIQFDQSSNSRNNYVLT 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,844
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)