Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0119
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 485 ILCLQYKKP*PNQCKQVNEMKKINKGFVSQSNKNRGK 375
           I C +Y+ P PN  +  N  + +N+G VS +N+N  K
Sbjct: 746 ICCQKYQPPSPNNNRPAN--RGVNQGSVSNNNQNNNK 780


>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
           protein F46H5.4 protein.
          Length = 2018

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 694 ENGTLKCTKYTSIKFSLRQNDRTEYLLTYLLMFYFCNMGTGRKFLFIV 551
           ENG+ + +  TS K S+  ++RT +    + +   C++  G   LF V
Sbjct: 631 ENGSTRMSFLTSAKTSVIYHNRTPHFTDEIKLSLPCDLNDGHHLLFTV 678


>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 710 LKSIKRKRDTEMYKIYIHKI*PATE 636
           +++I+R  D E Y +Y+HKI P  E
Sbjct: 115 VRNIERHSDGEPYDVYLHKIKPDEE 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,403,515
Number of Sequences: 27780
Number of extensions: 305373
Number of successful extensions: 711
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)