Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0119
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   6.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.9  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   9.1  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   9.1  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 697 NENGTLKCTKYTSIKFSLRQNDRT 626
           +EN T  C KY     SLR   R+
Sbjct: 200 SENETKTCKKYAISSNSLRSRSRS 223


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 400 DTKPLFIFFISFTCLH 447
           +TK  FI+ ++  CLH
Sbjct: 4   NTKQAFIYSLALLCLH 19


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 400 DTKPLFIFFISFTCLH 447
           +TK  FI+ ++  CLH
Sbjct: 4   NTKQAFIYSLALLCLH 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,159
Number of Sequences: 438
Number of extensions: 4274
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)