Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0117
(372 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0460 + 5954548-5954816,5954940-5954997 29 1.5
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 28 2.0
01_01_1192 + 9511961-9512977,9513860-9514078 28 2.0
08_01_1044 + 10580425-10580502,10585515-10586585 28 2.7
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 27 3.6
12_01_0046 - 373974-374188,374298-374580,374698-374764,375705-37... 27 3.6
11_04_0107 + 13517573-13517710,13517827-13517994 27 3.6
10_02_0015 + 4243218-4243420,4243553-4243745,4243818-4243898,424... 27 3.6
05_05_0020 - 21560896-21561352,21563399-21563480,21564143-215642... 27 3.6
12_02_1222 + 27145264-27148287 27 4.7
08_01_0796 - 7696339-7696457,7696749-7696795,7696813-7697084 27 4.7
05_05_0142 - 22673607-22674134 27 4.7
06_03_1506 + 30641428-30642168 27 6.2
04_01_0229 - 2897484-2900402 27 6.2
03_06_0692 + 35585445-35586008,35586222-35586560 27 6.2
02_05_0692 + 30973171-30973908 27 6.2
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 26 8.2
10_05_0006 + 7752426-7752497,7752663-7753223 26 8.2
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 26 8.2
03_06_0078 + 31505126-31507933 26 8.2
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 26 8.2
>04_01_0460 + 5954548-5954816,5954940-5954997
Length = 108
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 210 GCGNDGSRDDHWLGSNGSNVSNLDRLGDG-AIDNNHGLSNDFGFVNDNHGFRDNGIDTGS 34
G G +D+ GS + + +G G ++DN+H + D NHG D G TG+
Sbjct: 29 GTGTTAEQDNTG-GSTSAKHTLPQAVGSGTSVDNHHAIPRD---QYSNHGGDDGGGSTGT 84
Query: 33 G 31
G
Sbjct: 85 G 85
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 210 GCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVND-NHGFRDNGIDTGS 34
G GN G + G NG+N + G NN+G VN N G+R G
Sbjct: 425 GRGNGGYQQR---GYNGNNNGGYQQRGYNG--NNNGRFQQERAVNSGNGGYRQGGYRGDG 479
Query: 33 GYNRGR 16
GY +GR
Sbjct: 480 GYQQGR 485
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -1
Query: 246 RYSVKGLRKSDSGC-GNDG----SRDDHWLGSNGSNVSNLDRLG 130
R + K KSD G G+DG S DHW G NG + + R G
Sbjct: 331 RSTTKQWLKSDDGLIGDDGMAGRSYPDHWKGENGLYCAGMVRRG 374
>08_01_1044 + 10580425-10580502,10585515-10586585
Length = 382
Score = 27.9 bits (59), Expect = 2.7
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Frame = -1
Query: 285 SARERSWWTCHI-DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGA--ID 115
+ + R WW + S KG G G WL S N N + GDG I+
Sbjct: 125 ATKMREWWKEEFFEEMSKKGGSFDKRRGGGGGGGGKPWLRSISMNTGNGNANGDGGNNIE 184
Query: 114 NNHGLSNDFGFVNDNHGFRDNGIDTGSG 31
GL F + R G GSG
Sbjct: 185 ATSGLDIS-SFRRNRKRSRRRGRSVGSG 211
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 234 KGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVND 73
K +K + + DD + N N N D LG GA G++ DF +N+
Sbjct: 180 KKKKKKKATRKSSSDEDDVEVEENKENTDNEDGLGIGAGVAQDGVAQDFASLNE 233
>12_01_0046 -
373974-374188,374298-374580,374698-374764,375705-375889
Length = 249
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 207 CGNDGSRDDHWL---GSNGSNVSNLDRLGDGAIDNNHGLSND 91
CGND R + L GS G + RLG +++++HG D
Sbjct: 208 CGNDKDRFEQQLLPCGSIGLEMPFTCRLGPASVNSSHGEKED 249
>11_04_0107 + 13517573-13517710,13517827-13517994
Length = 101
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 216 DSGCGNDGSRDDHWLGSNGSNVSNLDRLG 130
DSG ND R WLG +GS +NL R G
Sbjct: 38 DSGWDNDEERLGLWLG-DGSGDNNLARFG 65
>10_02_0015 +
4243218-4243420,4243553-4243745,4243818-4243898,
4244267-4244377,4244921-4245211,4245301-4245363,
4245571-4245636,4245761-4245979
Length = 408
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 195 GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSG 31
GS DH + S++D+ G I + G D N+ + DN D G G
Sbjct: 322 GSAPDHHEAEYQHDQSDVDQEGGNDIGEDEGNDFDLEEGNEIPEYEDNDFDLGEG 376
>05_05_0020 -
21560896-21561352,21563399-21563480,21564143-21564263,
21564424-21565074,21565206-21565338,21565677-21565728,
21566115-21566244,21567241-21567300,21567444-21567536,
21567795-21567919,21568263-21568353,21568828-21569127,
21569415-21570038
Length = 972
Score = 27.5 bits (58), Expect = 3.6
Identities = 27/92 (29%), Positives = 35/92 (38%)
Frame = -1
Query: 285 SARERSWWTCHIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNH 106
S +ER+ V+G K CG + DH NGS++ LD D +I H
Sbjct: 644 STQERTSCEFRYSGEDVEGAAKPQCSCGENACEGDH----NGSSMRGLD--SDDSIGRKH 697
Query: 105 GLSNDFGFVNDNHGFRDNGIDTGSGYNRGRAS 10
+ H F N T NRGR S
Sbjct: 698 HFRSKLS--RKYHSFMRNLWFT----NRGRES 723
>12_02_1222 + 27145264-27148287
Length = 1007
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 198 DGSRDDHWLGSNGSNVSNLDRLGDGAI 118
DG RD++ +GS GS +LG GA+
Sbjct: 679 DGVRDENLIGSGGSGNVYRVKLGSGAV 705
>08_01_0796 - 7696339-7696457,7696749-7696795,7696813-7697084
Length = 145
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 249 DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNV 151
DR+ V+ K D GC + ++D+H GS+ S V
Sbjct: 10 DRHEVE-TEKGDHGCQQNKAKDEHRHGSDASIV 41
>05_05_0142 - 22673607-22674134
Length = 175
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = -1
Query: 195 GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSG 31
G R W G G ++ G+G G + G D G G D G G
Sbjct: 111 GRRGRRWRGRGGGGEEGVEGSGEG---GGEGGGGEEGVEGDGEGGEGGGFDGGEG 162
>06_03_1506 + 30641428-30642168
Length = 246
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -1
Query: 174 LGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSGYNRG 19
+G G + G+G + +G + +GF N G G G GY G
Sbjct: 32 IGGGGGGYGSGGGEGNGGYGHGYGYGSGYGF--GNGGVGGGGYGGGGGYGSG 81
>04_01_0229 - 2897484-2900402
Length = 972
Score = 26.6 bits (56), Expect = 6.2
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = -1
Query: 243 YSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDF-------G 85
+ VK + S+ N S DH G+ N G+G N LSN+F G
Sbjct: 494 HHVKWIGTSNKDLTNKSS--DHVEGNESDLNDNSSGHGEGIGSGNKHLSNNFLNHVEGIG 551
Query: 84 F-VNDNHGFRDNGIDTG 37
F +NDN + GI +G
Sbjct: 552 FDLNDNSSDHEEGIGSG 568
>03_06_0692 + 35585445-35586008,35586222-35586560
Length = 300
Score = 26.6 bits (56), Expect = 6.2
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -1
Query: 204 GNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVND-----NHGFRDNGID- 43
G D DD W + N+ D N+HG S+D G ++D GF+ N I
Sbjct: 99 GGDDIADDFWGNWHDGNLEMFDD------SNDHGSSDDEGAIHDIVAIPGEGFQFNIIAI 152
Query: 42 TGSGY 28
TG G+
Sbjct: 153 TGGGF 157
>02_05_0692 + 30973171-30973908
Length = 245
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 288 TSARERSWWTCHIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSN 145
+S R R W H R S GCG+ G R LG V+N
Sbjct: 55 SSQRRRQWLLWHGVRRRGGAFGSSGCGCGDHGRRRHGGLGRLVEGVAN 102
>10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = -1
Query: 168 SNGSNVSNLDRLGDGAIDNNHGLSN---DFGFVNDNHG--FRDNGIDTGSGYNR 22
++GS++ N+D++GD + + L G +N + G N + GS +N+
Sbjct: 993 NDGSDIPNMDQMGDILLGKKNALQRPLMQHGIINSSQGENMAANIPNMGSSFNK 1046
>10_05_0006 + 7752426-7752497,7752663-7753223
Length = 210
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 246 RYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRL 133
R G +K GC G +D H + + N SN +RL
Sbjct: 149 RLGAPGPKKCTRGCSWCGLKDGHNVSTCPKNPSNFERL 186
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 26.2 bits (55), Expect = 8.2
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Frame = -1
Query: 225 RKSDSGCGNDGSRDDHWLGS-NGSNVS----NLDRLGDGAIDNN----HGLS---NDFG- 85
R ++ G DGS +D LGS +GSN S N GA NN G S ND
Sbjct: 204 RDGNTSDGGDGSWNDGGLGSGSGSNSSYGHGNSTNGAGGANMNNIIHSSGTSSSANDSSR 263
Query: 84 FVNDNHGFRDNGIDTGSGYN 25
++ N+ + +NG GS +N
Sbjct: 264 RISGNNNWNNNGRSAGSNHN 283
>03_06_0078 + 31505126-31507933
Length = 935
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 141 DRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSGYNRGRA 13
+ L + + D + S D ++D G D G + GSG R R+
Sbjct: 44 EALEEASEDGSLAKSRDAALLDDGGGGGDGGGEEGSGVGRSRS 86
>01_01_0334 -
2698347-2699020,2699321-2699477,2699576-2699647,
2699697-2700641,2701183-2701259,2701908-2702064
Length = 693
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 261 TCHIDRYSVKGLRKSDSGCGNDGSRDDHWL 172
+CH+D + + D+ ND S++DHW+
Sbjct: 633 SCHLDEQPQSSI-EIDTILSNDLSKNDHWV 661
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,410,867
Number of Sequences: 37544
Number of extensions: 127410
Number of successful extensions: 430
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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