Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0117
         (372 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   2.8  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   3.7  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   3.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   6.4  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    22   8.5  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 18/73 (24%), Positives = 34/73 (46%)
 Frame = -1

Query: 228 LRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNG 49
           L++ D   GN G+      G+N +N     +     ++   G +N     N+N+   +NG
Sbjct: 59  LKQFDLPLGNTGNS-----GNNNNNGVGNHQQQPSPVNEGTGKTN-----NNNNNNNNNG 108

Query: 48  IDTGSGYNRGRAS 10
            +TG+  N G ++
Sbjct: 109 SNTGATVNSGSSN 121


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 281 PESGHGGHVTLIDIQLRVSGRVTAGA 204
           P  GHG  V +ID +L     V +GA
Sbjct: 119 PYIGHGESVRIIDAELGTLEHVHSGA 144


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 281 PESGHGGHVTLIDIQLRVSGRVTAGA 204
           P  GHG  V +ID +L     V +GA
Sbjct: 5   PYIGHGESVRIIDAELGTLEHVHSGA 30


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 252  IDRYSVKGLRKSDSGCGNDGSRDD 181
            +DR+    L+ +DS  G DG+ DD
Sbjct: 1807 VDRFD---LQHADSNGGEDGNEDD 1827


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 123 AIDNNHGLSNDFGFVNDNHGFRDNGIDTG 37
           A  NNHG+   +G       FR+   D G
Sbjct: 23  ACSNNHGMIRKYGLNICRQCFREYAKDIG 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,381
Number of Sequences: 2352
Number of extensions: 4865
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)