Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0115
(391 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 43 1e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 1e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 41 3e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 41 4e-04
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 41 4e-04
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 40 5e-04
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 40 5e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 40 0.001
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 39 0.001
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 39 0.001
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.001
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.002
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 38 0.003
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 36 0.009
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.012
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.021
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.036
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.047
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.047
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.047
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.047
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.063
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.063
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.063
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.063
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.083
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.083
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.11
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.14
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.19
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.33
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.44
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 30 0.77
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.77
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.77
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_22793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 27 5.4
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_44966| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07) 27 7.2
SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 27 7.2
SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 26 9.5
SB_48395| Best HMM Match : MAM (HMM E-Value=0) 26 9.5
SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47) 26 9.5
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGS--NGRSTC 184
W G+GR D+ SG +Q + + ++ C R +G+ + + LC + N C
Sbjct: 69 WLTGWGRQVDS-SGPLPDILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGAC 127
Query: 185 SGDSGGPL 208
GDSGGPL
Sbjct: 128 QGDSGGPL 135
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 8 SWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCS 187
++ G+GR S + + +Q + ++ C T G V S +C G+ G S C+
Sbjct: 412 NFGEGWGRISSSDQHTLADKLQQSKVPLVNYTTCRSTNGATVDENSMICAGGA-GSSACN 470
Query: 188 GDSGGPL 208
GDSGGPL
Sbjct: 471 GDSGGPL 477
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSG 190
+ G+GR S + + +Q V+ + CA +T+ G +G S CSG
Sbjct: 437 YTTGWGRVSGSMMFFMATKLQQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSG 496
Query: 191 DSGGPL 208
DSGGPL
Sbjct: 497 DSGGPL 502
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 40.7 bits (91), Expect = 4e-04
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS-TLCVDGSNGRSTCS 187
+ G+GRT S A Q Q L V ++ C RT G V + S ++ G G+ C
Sbjct: 156 YITGWGRTVGGGSAAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQ 213
Query: 188 GDSGGP 205
GDSGGP
Sbjct: 214 GDSGGP 219
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 40.7 bits (91), Expect = 4e-04
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCS 187
W G+GR A+ G +Q S+ V++ A C + + I S LC G TC
Sbjct: 826 WITGWGRL--ASGGTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGGIDTCQ 882
Query: 188 GDSGGPL 208
GDSGGP+
Sbjct: 883 GDSGGPM 889
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 40.7 bits (91), Expect = 4e-04
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 17 AGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSG 190
AG+GR + + A Q+ + L V +NA C + G + + AS +C G GR C G
Sbjct: 532 AGWGRVFEGSDEAEFLQEAE--LVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQG 588
Query: 191 DSGGPL 208
DSGGPL
Sbjct: 589 DSGGPL 594
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCS 187
W G+GR S + G+ +QVS+ + + A C ++ N I S +C G C
Sbjct: 27 WVTGWGRLS--SGGSTPDYLQQVSVPIRSRARCDSSYPNK-IHDSMICAGIDKGGIDACQ 83
Query: 188 GDSGGPL 208
GDSGGP+
Sbjct: 84 GDSGGPM 90
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTC 184
+ AG+GR A Q Q + +++ C R +G + S +CV + N S+C
Sbjct: 447 YIAGWGRLQSLGDVALTLQ--QAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSC 504
Query: 185 SGDSGGPL 208
GDSGGPL
Sbjct: 505 QGDSGGPL 512
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRST-C 184
+ G+G T +G + + +Q L + ++ C + V + LC + +G S C
Sbjct: 206 YITGWGST--IGTGNSPRILQQAMLPIASHNDCKNKY-YGVSSTAHLCAGEARSGASGGC 262
Query: 185 SGDSGGPL 208
+GDSGGPL
Sbjct: 263 NGDSGGPL 270
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNG--RSTC 184
+ +G+GR +++ G+N Q + S+ ++ C + N I + + G G + TC
Sbjct: 1913 YVSGWGRIGESSPGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTC 1970
Query: 185 SGDSGGPL 208
GDSGGPL
Sbjct: 1971 KGDSGGPL 1978
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTC 184
W G+G ASG N K Q S+ +++ + C + N I S LC + G C
Sbjct: 77 WITGWGTL---ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDAC 132
Query: 185 SGDSGGPL 208
GDSGGPL
Sbjct: 133 QGDSGGPL 140
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGD 193
G+GR + + A Q+ + L V +NA C + G + + AS +C G GR C GD
Sbjct: 73 GWGRVFEGSDEAEFLQEAE--LVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGD 129
Query: 194 SGGPL 208
SGGPL
Sbjct: 130 SGGPL 134
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTC 184
W G+G ASG N K Q S+ +++ + C + N I S LC + G C
Sbjct: 421 WITGWGTL---ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDAC 476
Query: 185 SGDSGGPL 208
GDSGGPL
Sbjct: 477 QGDSGGPL 484
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVI-IASTLCVDGSNGRSTCS 187
W G+GR + GA+ + +Q ++++ A C + ++ST+ G TC
Sbjct: 343 WITGWGRLH--SGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQ 400
Query: 188 GDSGGPL 208
GDSGGPL
Sbjct: 401 GDSGGPL 407
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 202
R + ++ N VC R+ +N T C DG G TC GDSGG
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGG 293
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 37.9 bits (84), Expect = 0.003
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 GTSWAAGFGR--TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR 175
G + +G+GR +SD AN Q+ +VS+ V+ S +C G+ G
Sbjct: 83 GNCFISGWGRINSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAGGA-GS 141
Query: 176 STCSGDSGGPL 208
S C GDSGGPL
Sbjct: 142 SICHGDSGGPL 152
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 36.3 bits (80), Expect = 0.009
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 23 FGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSG 199
+GRT++ G++ QV + +++ + C+R + + S +C S G +C GDSG
Sbjct: 2 WGRTAEG--GSSPTVLMQVEVPIVSASTCSRAYSR--LHESMVCAGRASGGIDSCQGDSG 57
Query: 200 GPL 208
GP+
Sbjct: 58 GPM 60
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.9 bits (79), Expect = 0.012
Identities = 20/85 (23%), Positives = 34/85 (40%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSG 190
+ G+GR + + RQ + ++ + C R + T+ G G S C+G
Sbjct: 64 YITGWGRYHSTITNPA-KSLRQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNG 122
Query: 191 DSGGPLTIXXXXXXXXXXXHRWISS 265
DSGGPL W+++
Sbjct: 123 DSGGPLVCEEGGKWVLRGVASWVAT 147
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.1 bits (77), Expect = 0.021
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCS 187
+ G+G S + G+ + Q + + T + C R++ I A +C G TC
Sbjct: 757 YITGWGTLS--SGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQ 813
Query: 188 GDSGGPL 208
GDSGGPL
Sbjct: 814 GDSGGPL 820
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 34.3 bits (75), Expect = 0.036
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 20 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDS 196
G+GR + + Q R ++ V++ + C + + I +C G+ +C GDS
Sbjct: 572 GYGRVGENEDLST--QLRHATIPVLSVSECRANYSGHTINDKVICAGYEGGKIDSCKGDS 629
Query: 197 GGP 205
GGP
Sbjct: 630 GGP 632
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 33.9 bits (74), Expect = 0.047
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RS 178
+ G+G T+ S + N + +V L ++ ++ C T+ + I C G+ G ++
Sbjct: 421 YVTGWGSTNYRGSPSPNYLQ-EVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKA 478
Query: 179 TCSGDSGGPL 208
CSGDSGGPL
Sbjct: 479 VCSGDSGGPL 488
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 33.9 bits (74), Expect = 0.047
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCS 187
W G+G A+ G +Q S+ +++ + C + + I +S LC G C
Sbjct: 240 WITGWGHL--ASGGDTPDLLQQASVPIVSRSRCDKAYPGK-IDSSMLCAGLDKGGIDACQ 296
Query: 188 GDSGGPL 208
DSGGPL
Sbjct: 297 RDSGGPL 303
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 33.9 bits (74), Expect = 0.047
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RS 178
+ G+G T+ S + N + +V L ++ ++ C T+ + I C G+ G ++
Sbjct: 670 YVTGWGSTNYRGSPSPNYLQ-EVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKA 727
Query: 179 TCSGDSGGPL 208
CSGDSGGPL
Sbjct: 728 VCSGDSGGPL 737
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 33.9 bits (74), Expect = 0.047
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 GTSWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRS 178
G + G+G S + GA + Q S+ +++ + C I S LC G
Sbjct: 154 GKCYITGWGSLS--SGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVD 211
Query: 179 TCSGDSGGPL 208
+C GDSGGPL
Sbjct: 212 SCQGDSGGPL 221
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 33.5 bits (73), Expect = 0.063
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCS 187
+ G+G+ S S + Q Q ++ V+ A C + + I S LC + G C
Sbjct: 451 YITGWGKLSSHGSAPDILQ--QATVPVVGRARCMKAYRGQ-IHESMLCAGLDAGGVDACQ 507
Query: 188 GDSGGPL 208
GDSGGP+
Sbjct: 508 GDSGGPM 514
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 33.5 bits (73), Expect = 0.063
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +2
Query: 17 AGFGRTS--DAA--SGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTC 184
AG+G T DA+ SG +QV L +++ VC N + D R C
Sbjct: 854 AGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQVNHTNAITKRMRCAGDVMGERDAC 913
Query: 185 SGDSGGPLTI 214
GDSG P+ +
Sbjct: 914 KGDSGSPIVV 923
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 33.5 bits (73), Expect = 0.063
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +2
Query: 20 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSG 199
G+GRT GA Q+ + + + + V S +C G C GDSG
Sbjct: 94 GWGRTVGGGQGAEILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAGGCQGDSG 153
Query: 200 GP 205
GP
Sbjct: 154 GP 155
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 33.5 bits (73), Expect = 0.063
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSN--GRSTC 184
+ G+G T SG + +Q+ + ++ +VC + II G N G+ C
Sbjct: 115 YLTGWGETV-LDSGVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGGQDGC 173
Query: 185 SGDSGGPLT 211
GDSGGPL+
Sbjct: 174 LGDSGGPLS 182
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 33.1 bits (72), Expect = 0.083
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVC-ARTFGNNVIIASTLCVD-GSNGRSTC 184
+ G+G+T++ + + ++ + +++ VC A N I C GR +C
Sbjct: 119 FVTGWGKTAEGSP--YSPVLNELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSC 176
Query: 185 SGDSGGPL 208
GDSGGPL
Sbjct: 177 GGDSGGPL 184
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 33.1 bits (72), Expect = 0.083
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRST--- 181
+ G+GRT GA+ Q + + +++ CA ++ S + G ST
Sbjct: 1457 YITGWGRTGYNRPGASVLQ--EAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISG 1514
Query: 182 CSGDSGGP 205
C GDSGGP
Sbjct: 1515 CFGDSGGP 1522
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 32.7 bits (71), Expect = 0.11
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Frame = +2
Query: 20 GFGRTSDAASGANNQQKRQVSLQVITNAVCA-RTFGN-NV--------IIASTLCVD--G 163
G+GR+ AN Q Q L+V++N C+ R G+ N+ + + LC G
Sbjct: 160 GWGRSYYPGPTANKLQ--QADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAG 217
Query: 164 SNGRSTCSGDSGGP 205
G++ C+GDSGGP
Sbjct: 218 KTGKNGCNGDSGGP 231
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 32.3 bits (70), Expect = 0.14
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVC--ARTFGNNVIIASTLCVDGSNGR-ST 181
+ AG+GR S G + R+V + ++ +C A ++G VI LC G
Sbjct: 167 YVAGWGRRS--FGGEQSLALREVQVHMVPRELCNSANSYGG-VIHERALCAGPREGGCGP 223
Query: 182 CSGDSGGPL 208
C DSGGPL
Sbjct: 224 CQFDSGGPL 232
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 74 QVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTIXXXXXXXXXXX 247
+ ++ ++ C + + ++ A+ C + S+ C GDSGGP ++
Sbjct: 268 EATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQ 327
Query: 248 HRWI 259
HR +
Sbjct: 328 HRHV 331
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNN--VIIASTLCV-DGSNGRST 181
W GR D + ++ + ++ + VC + F + + + C S G+
Sbjct: 244 WGKTVGRQGDVSVKNLADALKETCMPIVNSHVCNQAFQDEGYSVTPNMFCAGQASGGKDI 303
Query: 182 CSGDSGG 202
C GDSGG
Sbjct: 304 CQGDSGG 310
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNN--VIIASTLCVD--GSNGRS 178
+ G+G T +GA Q Q + V+++ C R + V + LC G++ S
Sbjct: 413 YVTGWGMTEYGNAGARLLQ--QARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGNSSIS 470
Query: 179 TCSGDSGGP 205
C GDSGGP
Sbjct: 471 GCHGDSGGP 479
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 53 ANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPL 208
A ++ +Q L + ++ C R +G+ V + LC S+ C+GDSGGPL
Sbjct: 903 AISRHPQQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPL 955
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 31.1 bits (67), Expect = 0.33
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGN-NVIIASTL-CVD-GSNGRST 181
+ +G+G +A G Q ++ +++ C + + + + ++S + C G+ G
Sbjct: 235 YISGWGHLQEAGHGP--WVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDA 292
Query: 182 CSGDSGGPL 208
C GDSGGPL
Sbjct: 293 CQGDSGGPL 301
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 71 RQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPL 208
+Q L + ++ C R +G+ V + LC S+ C+GDSGGPL
Sbjct: 579 QQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPL 625
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 30.7 bits (66), Expect = 0.44
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIA--STLCVDGSNGRSTCSGD 193
G+GR G ++ +Q L V +++ C R V + S +C G G C GD
Sbjct: 201 GWGRL--VGGGQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGM-GMGGCQGD 257
Query: 194 SGGP 205
SGGP
Sbjct: 258 SGGP 261
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 29.9 bits (64), Expect = 0.77
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 17 AGFGRTSDAASGANNQQKRQVSLQVITNAVCA--RTFGNNVIIASTLCVD-GSNGRSTCS 187
+G+G + A G+ ++ Q + +++ C+ +++G+ I + LC G +C
Sbjct: 350 SGWGALQEGA-GSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGMRQGGVDSCQ 407
Query: 188 GDSGGP 205
GDSGGP
Sbjct: 408 GDSGGP 413
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 29.9 bits (64), Expect = 0.77
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 11 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFG-NNVIIASTLCVD-GSNGRSTC 184
+ G+G+T G Q R+ +++++ +C + N I LC G C
Sbjct: 175 YITGWGKTE--FEGTKPQVIREATVKLVPPEICNQVESYNGSIHVRALCAGFDQGGVDAC 232
Query: 185 SGDSGGPLT 211
DSGGPL+
Sbjct: 233 QFDSGGPLS 241
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.9 bits (64), Expect = 0.77
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 17 AGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAST-LCVDGSNG-RSTCSG 190
+G+G T +G+ V + ++++A C + N I T LC G + +C
Sbjct: 165 SGWGHTR--WNGSQPNVLNFVMVPLVSHATCNKPLSYNGTIHETALCAGYERGLKDSCEF 222
Query: 191 DSGGPL 208
DSGGPL
Sbjct: 223 DSGGPL 228
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 202
R + V + +C + + T C +G G TC GDSGG
Sbjct: 191 RHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGG 235
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 225 PPLPMVRGPPESPLQVLRPLEPSTQRVEAMIT 130
PPLP PP P+Q RP P+T +A T
Sbjct: 920 PPLP----PPPPPIQTTRPTVPTTPTTQASTT 947
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 83 LQVITNAVCARTFGNNVIIASTLCVDGSNGRST--CSGDSGGPL 208
L +++NA C R + + V + LC S+ C+GDSGG L
Sbjct: 2 LPLVSNAECQRKY-SKVNAKAHLCACSGQAASSGGCNGDSGGAL 44
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -2
Query: 189 PLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFCWLLAPEAASEVL 28
P Q LEP VE ++T V A TA V L R L PE+A+E L
Sbjct: 118 PFQSAESLEPLLLMVEQLVTSPRAVDASTASVYLKILVDRCMVPLYPESATEYL 171
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 25 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 141
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 11 WAAGFGRTSDA-ASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCV---DGSNGRS 178
+ G+G+ + A + Q+ + + T + NV S LC D S
Sbjct: 242 YMTGWGKRNHGDADMSKKLQEAVMPVVAFTECDLRNSHKQNVGWKSMLCAGYNDNKTQTS 301
Query: 179 TCSGDSGGPL 208
C GDSGGPL
Sbjct: 302 GCIGDSGGPL 311
>SB_22793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 262 LKVAREATLPASPESHPSTPGSGL 333
L + + +LP PE+HPS P G+
Sbjct: 214 LHLFKNYSLPLQPETHPSNPRQGI 237
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 PASEGPPMLLREPTTNKNAK*ASRSLPTPSAPARLET--M*SLPPP 149
PA PP P K ++ SLP P P T M LPPP
Sbjct: 217 PAPAPPPRPCPAPRVRKTIPSSTDSLPRPGRPPSPSTRGMKPLPPP 262
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 18 PASEGPPMLLREPTTNKNAK*ASRSLPTPSAPARLETM*SLPP 146
P + PP +EPTT+ + S S T +APA + PP
Sbjct: 786 PPTTAPPTTTKEPTTDAS---TSTSAATTTAPATTTPPTTAPP 825
>SB_44966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 195 ESPL-QVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFCWLLAPEAASE 34
E PL ++L P R E I L NVR TA+ L R WL A + E
Sbjct: 328 ERPLCELLGPFVIHGLRPEGQINLHYNVRILTAVSRFCSLYQRKAWLWAKQKCDE 382
>SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07)
Length = 487
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 289 PASPESHPSTPGSGLE 336
P SP +P TPG+GLE
Sbjct: 352 PVSPAYNPHTPGAGLE 367
>SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -2
Query: 231 TLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFC 64
TLP + PP P +V+ P P + P+ + + L+ LT++ C
Sbjct: 82 TLPRRHTTKSPPPKPPRVIPPKPPRLMEKKVFTCENPHCQKKEELLGIVELTFKSC 137
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 47 SGANNQQKRQVSLQVITNAVCARTFG-NNVIIASTLCVDGSNGR-STCSGDSGGPL 208
+G + R+ ++++ VC N I + LC G C DSGGPL
Sbjct: 94 NGTQPEALREAKVRLVPTWVCNLVNSYNGTIHSRALCAGFKEGGVDACQYDSGGPL 149
>SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 287
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 55 QQPT--KTPSEPPGHYQRRLRPHVWKQCDHCLHPL 153
+QPT +PS P G PHV Q H HP+
Sbjct: 175 RQPTLNSSPSPPTGSGPLTGNPHVTTQLSHGSHPV 209
>SB_48395| Best HMM Match : MAM (HMM E-Value=0)
Length = 901
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 107 CARTFGNNVIIASTLCVDGS--NGRSTCSGDS 196
C++T GN + + LC D + NG C G S
Sbjct: 204 CSKTCGNGIHTRTRLCDDPAPKNGGKACEGTS 235
>SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47)
Length = 715
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 270 NLELIQRCDTDQLTLPPLPMVRGPPESPLQVLRPLEPSTQRVE 142
NL IQ + P+ + PP +PL +PL+P +VE
Sbjct: 257 NLSSIQEGGPGVGSASPIQEEKAPPLNPLTSSKPLQPLKVQVE 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,120,144
Number of Sequences: 59808
Number of extensions: 229632
Number of successful extensions: 917
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 681761575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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