Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0115
(391 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 35 0.018
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 33 0.071
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 1.5
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 1.5
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 1.5
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 2.7
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 2.7
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 27 3.6
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 27 4.7
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 27 4.7
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 26 8.2
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 26 8.2
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 26 8.2
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 26 8.2
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 26 8.2
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.1 bits (77), Expect = 0.018
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 23 FGRTSDAASGANNQQKRQVSLQVI---TNAVCARTFGNNVIIASTLCVDGSNGRSTCSGD 193
FG SD G +N + + + T A C +G ++ S C ++ CSGD
Sbjct: 215 FGWGSDPGKGFDNAAFPMIQVLTLATETLATCEENWGTSIPFDS-FCTAEEEDKNVCSGD 273
Query: 194 SGGPLT 211
SGG LT
Sbjct: 274 SGGGLT 279
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 33.1 bits (72), Expect = 0.071
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 20 GFGRTSDAASGANNQQKRQVSLQVITNAVCAR--TFGNNVIIASTLCVDGSNGR-STCSG 190
G+G T + +S + R++ + +++ C+ + + + S LC S G+ +C G
Sbjct: 181 GWGSTIEGSS-LSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQG 239
Query: 191 DSGGPL 208
DSGGPL
Sbjct: 240 DSGGPL 245
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 112 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 14
G DG G++L HLA L+ SS G P S
Sbjct: 2373 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2405
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 112 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 14
G DG G++L HLA L+ SS G P S
Sbjct: 2395 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2427
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 112 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 14
G DG G++L HLA L+ SS G P S
Sbjct: 1216 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 1248
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 112 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 14
G DG G++L HLA L+ SS G P S
Sbjct: 1194 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 1226
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 112 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 14
G DG G++L HLA L+ SS G P S
Sbjct: 2373 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2405
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 112 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 14
G DG G++L HLA L+ SS G P S
Sbjct: 2395 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2427
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 29 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGG 202
R + AA+G+N Q +Q Q + C + V+ + + DG G ST G GG
Sbjct: 2071 RNAAAAAGSNVQFIQQQQQQQQSGKNCGQGQSFVVMGSQSSSNDGQGGASTVGGGGGG 2128
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 29 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGG 202
R + AA+G+N Q +Q Q + C + V+ + + DG G ST G GG
Sbjct: 2071 RNAAAAAGSNVQFIQQQQQQQQSGKNCGQGQSFVVMGSQSSSNDGQGGASTVGGGGGG 2128
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 56 NNQQKRQVSLQVITNAVCARTFGN----NVIIASTLCVDGSNGRSTCSGDSGGPLTI 214
N+Q + S+ +I++ C +T+ +V I G+ T GDSGGPL I
Sbjct: 179 NSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAPGDSGGPLLI 235
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 27.1 bits (57), Expect = 4.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 144 EAMITLFPNVRAQTALVMTWRLTW 73
E FP++ QTA ++TW + W
Sbjct: 177 ETFTWAFPSIPLQTAHILTWLIIW 200
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 27.1 bits (57), Expect = 4.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 144 EAMITLFPNVRAQTALVMTWRLTW 73
E FP++ QTA ++TW + W
Sbjct: 177 ETFTWAFPSIPLQTAHILTWLIIW 200
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 258 IQRCDTDQLTLPPLPMVRGPPESPLQVLRPLEPSTQRVEAM 136
IQR +++ PP+ M RGP V P+ P Q V+ M
Sbjct: 1049 IQRLPMQRMSGPPVMMSRGPVYCSQPV--PMHPMQQNVQNM 1087
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 264 ELIQRCDTDQLTLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTW 85
+L++R D LPP P P+S Q L+ ++ R+ + +F ++ L M W
Sbjct: 696 DLLKRFKNDFFELPPNPESNTDPDS--QSTWNLKLNSARLLEIAPMFELIKEIQVLKMRW 753
Query: 84 R 82
R
Sbjct: 754 R 754
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 258 IQRCDTDQLTLPPLPMVRGPPESPLQVLRPLEPSTQRVEAM 136
IQR +++ PP+ M RGP V P+ P Q V+ M
Sbjct: 1049 IQRLPMQRMSGPPVMMSRGPVYCSQPV--PMHPMQQNVQNM 1087
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 201 PPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLT 76
P E P V+ P+T+ E + +F R +T V R T
Sbjct: 101 PTEKPAPVITTETPTTRETEKPVPIFITNRPETTTVRAVRTT 142
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +2
Query: 95 TNAVCARTFGNNVIIASTLCVDGSNGRST---CSGDSG 199
TN C N AS++CV +NG+ CS SG
Sbjct: 38 TNLFCTSVGSNTDCPASSICVTAANGQGVLICCSQPSG 75
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 228 LPPLPMVRGPPESPLQVLRPLEPSTQR 148
+ P P +R P + PL V RP+ ST +
Sbjct: 138 MDPTPSLRLPKKEPLPVQRPMARSTPK 164
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 228 LPPLPMVRGPPESPLQVLRPLEPSTQR 148
+ P P +R P + PL V RP+ ST +
Sbjct: 79 MDPTPSLRLPKKEPLPVQRPMARSTPK 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,866,302
Number of Sequences: 27780
Number of extensions: 166548
Number of successful extensions: 727
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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