Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0114
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    33   0.007
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.25 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.3  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   5.3  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 33.5 bits (73), Expect = 0.007
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 29  NVDTTRAQMSVLP*SKLPSSHPQSTSPLVPGQLTPL 136
           N+ T    + VLP SK+P+S+P   +P+VP    P+
Sbjct: 31  NIRTGANNIGVLPASKMPTSYPSLPAPIVPSPGAPI 66


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query: 19  VPAKRGHYESPDVGPALVEAPIV--PSPVHVTPRSWTTYPSRPH 144
           +P ++ H    D GPAL  API   P P+      +   P+RP+
Sbjct: 139 LPQQQQHPHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPN 182


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 390 HDHGGHQGHVTNVHWARGHNGGVSHDH 310
           H H  H G+    +   G +GG +HDH
Sbjct: 124 HHHHHHHGNNGGGNGGGGGSGGNAHDH 150


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 213  TFDCSGSTLSTGVALAASLMLIRMWTRGV 127
            T  CS     TGV +  S++L RM   GV
Sbjct: 1160 TVHCSAGVGRTGVFITLSIVLERMQYEGV 1188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,737
Number of Sequences: 2352
Number of extensions: 8957
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)