Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0114
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 36 0.021
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 33 0.15
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 33 0.15
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.60
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.79
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 31 0.79
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 31 0.79
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 30 1.8
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58742-5|AAB36859.3| 711|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical pr... 29 3.2
U13646-5|ABA00178.1| 353|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.2
Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF067947-8|AAC19225.1| 343|Caenorhabditis elegans Kinetochore n... 28 5.6
Z82260-8|CAB05136.1| 361|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z82260-7|CAB05135.1| 369|Caenorhabditis elegans Hypothetical pr... 28 7.4
U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting... 27 9.8
U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting... 27 9.8
U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting... 27 9.8
U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting... 27 9.8
U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting... 27 9.8
U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting... 27 9.8
U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical pr... 27 9.8
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 27 9.8
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 27 9.8
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRSAMITGE 232
G G HGGH G H G +GG H G+ RS + + Y G S+ T
Sbjct: 47 GGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRGLSSGST-- 104
Query: 231 TAGFSSTFDCSGSTLSTG 178
+S + + S STG
Sbjct: 105 NTSYSKSTPRTNSGYSTG 122
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -2
Query: 408 HNGRVSH--DHGGHQGHVTNVHWARGHNG--GVSHDHRGYTRSLGNNYRARYYDGRSAMI 241
H G SH +GGH GH + + G +G G+S G T + + R G S
Sbjct: 67 HGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRGLS---SGSTNTSYSKSTPRTNSGYSTGK 123
Query: 240 TGETAGFSSTFDCSGSTLST 181
T +TA S + + ST ST
Sbjct: 124 TTKTASSSRNYSNTSSTRST 143
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 411 GHN-GRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDG 256
GH+ G H H H H N H GH+ G ++D+ G++ S G +N+ +DG
Sbjct: 371 GHSHGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAGSDNHHGHSHDG 424
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 411 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNN 280
GH H DHG GH + H + GH+ + HDH G++ GNN
Sbjct: 360 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHG-GNN 403
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 411 GHN-GRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDG 256
GH+ G H H H H N H GH+ G ++D+ G++ S G +N+ +DG
Sbjct: 389 GHSHGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAGSDNHHGHSHDG 442
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 411 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNN 280
GH H DHG GH + H + GH+ + HDH G++ GNN
Sbjct: 378 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHG-GNN 421
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 408 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDG 256
H+ H H G H H GH+G SH H G+ S G+ + A + G
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHG--SHGVHHGHHESHGHGHHAPAHHG 604
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 304
GH+G HG H+ H H GH+G GV H H G
Sbjct: 578 GHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRG 304
GH+G +HG H GH H A H+G G H H G
Sbjct: 517 GHHG----EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 553
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 408 HNGRVSH-DHGGHQGHVTNVHWARGHNG-GVSHDH 310
H+ H +HG H GH H A H+G SH H
Sbjct: 413 HHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGH 447
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARG---HNGGVSHDHRGYTRSLG 286
GH+G HG H H + H H+ H H G+ S G
Sbjct: 540 GHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHG 584
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 417 ARGHNGRVSH--DHGGHQGHVTNVHWARGHNGGVSHDHRG 304
A H+G H HG H GH + H GH+ H H G
Sbjct: 570 APAHHGHHGHHGSHGVHHGHHES-H-GHGHHAPAHHGHHG 607
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRS 250
GH+G HG H + H H G H H G+ N++ ++ S
Sbjct: 668 GHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHS 722
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 396 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 304
V H GGH GHV H H+G H G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -2
Query: 411 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYRARYYDGRSAM 244
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+ + RS+M
Sbjct: 76 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQQQ---RRSSM 132
Query: 243 ITGETAG 223
G +G
Sbjct: 133 SAGSESG 139
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -2
Query: 411 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYRARYYDGRSAM 244
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+ + RS+M
Sbjct: 580 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQQQ---RRSSM 636
Query: 243 ITGETAG 223
G +G
Sbjct: 637 SAGSESG 643
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -2
Query: 411 GHNGRVSHDHGG------HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 256
G G SH HGG H H H+ G G H H Y+ S + YY G
Sbjct: 179 GGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGFHHHHHSSYSGSSSDYSSNNYYGG 236
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 310
GH+ HDHGG GH + H G GG HDH
Sbjct: 41 GHD-HGGHDHGGWGGHDHHDH-HHGGWGGHDHDH 72
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 387 DHGG--HQGHVTNVHWARGHNGGVSHDHRGY 301
DHGG H GH H GH+ G HDH G+
Sbjct: 23 DHGGGDHGGHDHGGHDHGGHDHG-GHDHGGW 52
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -2
Query: 390 HDHGGHQ--GHVTNVHWARGHNGGVSHDH 310
HDHGGH GH H G G HDH
Sbjct: 32 HDHGGHDHGGHDHGGHDHGGWGGHDHHDH 60
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQ--GHVTNVHWARGHNGGVSHDH 310
GH+ HDHGGH G + H H G HDH
Sbjct: 36 GHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDH 70
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 301
GH+ HDHGGH H H G HDH +
Sbjct: 31 GHD-HGGHDHGGHD------HGGHDHGGWGGHDHHDH 60
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1273 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1310
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1295 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1332
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1086 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1123
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1393 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1430
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1273 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1310
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1295 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1332
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1086 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1123
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1393 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1430
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1104 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1141
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 408 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 301
H+ SH HGGH G H+ + H H G+
Sbjct: 50 HHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHGH 85
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 390 HDHGGHQGHV-TNVHWARGHNGGVSHDHRG 304
H GGH GH+ T+ H H+GG H G
Sbjct: 38 HTDGGHHGHMDTHHHHDSHHHGGHHGGHHG 67
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1064 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1101
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -2
Query: 393 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY---RARYYDGRSAMITGETAG 223
+HDHG H + H+ G +HDH G++ ++ A + G S G + G
Sbjct: 75 AHDHG----HAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHSHG 130
Query: 222 FSSTFDCSGSTLSTGVALAASLMLIRMWTRGVS 124
S TG + R+W +S
Sbjct: 131 AESAKQVGDEYQYTGFLSFLNDAKTRLWVYAIS 163
>U58742-5|AAB36859.3| 711|Caenorhabditis elegans Hypothetical
protein F31A3.5 protein.
Length = 711
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 29 NVDTTRAQMSVLP*SKLPSSHPQSTSPLVPGQLTPLVHILININDAASATP 181
++DT RA ++ + S + + P TSP +PG+ P+ +I N + A P
Sbjct: 412 SIDTQRAPLANISTSSIHDAPPPPTSP-IPGRSRPVSYIETNGSGVAIPPP 461
>Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.5 protein.
Length = 233
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Frame = -2
Query: 414 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN-----YRARYYDGRS 250
+GHNG G G+ T+ RG G HR T + + Y Y DG S
Sbjct: 159 KGHNGNTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDGSS 218
Query: 249 AMITGETAGFSSTF 208
TA ++ F
Sbjct: 219 TFTCRATASYTVQF 232
>U13646-5|ABA00178.1| 353|Caenorhabditis elegans Hypothetical
protein ZK783.6 protein.
Length = 353
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 95 QSTSPLVPGQLTPLVHILININDAASATPVESVEPE 202
Q+T+P+V ++TP+ H N N+ + PV + E
Sbjct: 300 QATAPIVVERITPVAHNTYNSNNYGAFLPVNQMSME 335
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +2
Query: 80 PSSHPQSTSPLVPGQLTPLVHILININDAASATPVESVEPEQSNVEEKPAV 232
P++ P + PL P Q+ + + ++ + ++ P V EKP V
Sbjct: 30 PATTPIAEDPLTPAQIQDAIRLYRSVLSSTASAPSSPVRQAAPIAPEKPIV 80
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 399 RVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRG 304
R H HGGH GH + G +G G S HRG
Sbjct: 299 RGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 331
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 390 HDHGGHQGHVTNVHWARGHNG-GVSHDHRG 304
H HGGH GH + G +G G S HRG
Sbjct: 253 HGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 282
>Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.3 protein.
Length = 233
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Frame = -2
Query: 414 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN-----YRARYYDGRS 250
+GHNG+ G G+ T+ RG G HR T + + Y Y DG S
Sbjct: 159 KGHNGKTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDGSS 218
Query: 249 AMITGETAGFSSTF 208
+A ++ F
Sbjct: 219 TFTCQPSASYTVQF 232
>AF067947-8|AAC19225.1| 343|Caenorhabditis elegans Kinetochore null
protein 3 protein.
Length = 343
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 37 HYESPDVGPALVEAPIVPSPVHVTPRSWTT 126
H + DV P V+ IVPSP TP T
Sbjct: 92 HEDDDDVEPMEVDGTIVPSPQRATPTRGVT 121
>Z82260-8|CAB05136.1| 361|Caenorhabditis elegans Hypothetical
protein C32H11.10 protein.
Length = 361
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 58 GPALVEAPIVPSPVHVTPRSWTTYPSRPHSY*HQRC 165
G +EAP PS PR WT P + +Q C
Sbjct: 23 GTTTIEAPSAPSNTTFYPRGWTGKGLTPRALPNQVC 58
>Z82260-7|CAB05135.1| 369|Caenorhabditis elegans Hypothetical
protein C32H11.9 protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 58 GPALVEAPIVPSPVHVTPRSWTTYPSRPHSY*HQRC 165
G +EAP PS PR WT P + +Q C
Sbjct: 31 GTTTIEAPSAPSNTTFYPRGWTGKGLTPRALPNQVC 66
>U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting
protein protein16, isoform g protein.
Length = 375
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 417 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 256
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 109 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 164
>U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting
protein protein16, isoform k protein.
Length = 657
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 417 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 256
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 391 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 446
>U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting
protein protein16, isoform c protein.
Length = 706
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 417 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 256
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 440 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 495
>U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting
protein protein16, isoform a protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 417 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 256
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 397 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 452
>U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting
protein protein16, isoform b protein.
Length = 603
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 417 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 256
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 337 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 392
>U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting
protein protein16, isoform j protein.
Length = 716
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 417 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 256
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 450 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 505
>U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical
protein F08B1.3 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 196 FDAFNGGSAGSIVDVNKNVDERGKLSRNEG*RGLGMGRWELRLGQDRHLGSRS 38
F F GGS D+N D+ + R G MG+ R + R+ GSR+
Sbjct: 368 FRRFRGGSVNEYADLNHYCDDEDESGRANGYEMQEMGKMTGRQREQRN-GSRT 419
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -2
Query: 387 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRSAMITGETAGFSST 211
+H Q H ++R N G ++H G R NN R R Y+ R + +S
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGN 105
Query: 210 FDC 202
C
Sbjct: 106 QGC 108
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -2
Query: 387 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRSAMITGETAGFSST 211
+H Q H ++R N G ++H G R NN R R Y+ R + +S
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGN 105
Query: 210 FDC 202
C
Sbjct: 106 QGC 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,599,741
Number of Sequences: 27780
Number of extensions: 202844
Number of successful extensions: 884
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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