Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0114
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05510.1 68415.m00583 glycine-rich protein 35 0.060
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 31 0.73
At3g63100.1 68416.m07087 glycine-rich protein 31 0.97
At2g05440.2 68415.m00575 glycine-rich protein 31 0.97
At2g05440.1 68415.m00574 glycine-rich protein 31 0.97
At1g27090.1 68414.m03302 glycine-rich protein 30 1.7
At2g05530.1 68415.m00585 glycine-rich protein 28 5.2
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 28 5.2
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 6.8
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 27 9.0
At1g32560.1 68414.m04018 late embryogenesis abundant group 1 dom... 27 9.0
>At2g05510.1 68415.m00583 glycine-rich protein
Length = 127
Score = 34.7 bits (76), Expect = 0.060
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = -2
Query: 408 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 277
H G H GGH G + H GHNGG H GY G +Y
Sbjct: 44 HGGHGGHGGGGHYGGGGHGHG--GHNGGGGHGLDGYGGGHGGHY 85
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 277
GH G H HGGH G H G+ GG H G+ G +Y
Sbjct: 54 GHYGGGGHGHGGHNG--GGGHGLDGYGGG----HGGHYGGGGGHY 92
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 31.1 bits (67), Expect = 0.73
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 312 HRGYTRSLGNNYRARYYDGRSAMITG--ETAGFSSTFDCSGSTLSTGVALAASLMLIRMW 139
H T SLG+ ++ YY+ R +T + AGF F L TG L + L + +W
Sbjct: 300 HIHQTLSLGDTFKQYYYNNRDLQLTSDFQIAGF---FIVEDRVLRTGGGLISKLEVETLW 356
Query: 138 TRGVS 124
V+
Sbjct: 357 DTAVT 361
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = -2
Query: 414 RGHNGRVSHDHG---GHQGHVTNVHWARG---HNGGVSHDHRGYTRSLGNNY 277
RGH H HG GH+ H + R H G H HRG+ R G +
Sbjct: 90 RGHGHGRGHGHGHGHGHRRHGRDHRHGRDRGHHRGHGHHHHRGHRRGRGRGH 141
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN 280
G + R D G H+GH H RGH G H G+ R G +
Sbjct: 110 GRDHRHGRDRGHHRGH--GHHHHRGHRRGRGRGH-GHGRGRGGH 150
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSH 316
GH G H HGGH G H G+ GG H
Sbjct: 52 GHGGGGGHGHGGHNG--GGGHGLDGYGGGGGH 81
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 301
GH G H GG GH GHNGG H GY
Sbjct: 46 GHGGHGGHGGGGGHGH-------GGHNGGGGHGLDGY 75
>At2g05440.1 68415.m00574 glycine-rich protein
Length = 127
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSH 316
GH G H HGGH G H G+ GG H
Sbjct: 52 GHGGGGGHGHGGHNG--GGGHGLDGYGGGGGH 81
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 301
GH G H GG GH GHNGG H GY
Sbjct: 46 GHGGHGGHGGGGGHGH-------GGHNGGGGHGLDGY 75
>At1g27090.1 68414.m03302 glycine-rich protein
Length = 420
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 414 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGR 253
+ GR GG G N RG GG + + Y +S GN Y+ YY+ R
Sbjct: 340 QNQRGRRGARRGG--GGYQNGRGGRGGGGGYQNGRYESYDQSGGNGYQRNYYNNR 392
>At2g05530.1 68415.m00585 glycine-rich protein
Length = 115
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 411 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRSAMITGE 232
G+NG H+ GG+ G G+NGG GY R G YR + R GE
Sbjct: 56 GYNGGGGHNGGGYNG-------GGGYNGGGHGGRHGYCR-YGCCYRGYHGCSRCCSYAGE 107
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 131 PLVHILININDAASATPVESVEPEQSNVEEKPAVSP 238
PL + +++N AA +TP S P PA+SP
Sbjct: 406 PLTSVKVDLNQAAPSTPSPSPGPTAGFTFNLPALSP 441
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +2
Query: 17 PCRPNVDTTRAQMSVLP*SKLPSSHPQSTSPLVPGQLTPLVHILI-NINDAASATPV-ES 190
P TT ++ S +P PSS + P + VH N S TP E
Sbjct: 722 PTPVQAPTTSSETSQVP---TPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPTPSSEP 778
Query: 191 VE-PEQSNVEEKPAVSPVIIADLPS 262
V PEQS E P +PV + +PS
Sbjct: 779 VSSPEQSEEVEAPEPTPVNPSSVPS 803
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -2
Query: 408 HNGRVS-HDHGGHQGHVTNVHWARG--HNGGVSHDHRGYTRSLGNNYRARYYDGRSAMIT 238
HNG S +H G N H + G H+ G H GY S G+N+ + S+ T
Sbjct: 101 HNGHSSGSNHSSATGSTHNGHTSTGSNHSSGNGSRHNGY--SSGSNHSSSTGSNHSSS-T 157
Query: 237 GET 229
G T
Sbjct: 158 GST 160
>At1g32560.1 68414.m04018 late embryogenesis abundant group 1
domain-containing protein / LEA group 1
domain-containing protein contains Pfam domain, PF03760:
Late embryogenesis abundant (LEA) group 1
Length = 134
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 4 HEAAAVPAKRGHYESPDVGPALVEAPIVPSPVHVTPRSWTTYPSRPHSY*HQRCCQRYP 180
H + AK+ HY D GP + + VP+P V + P+ S Q YP
Sbjct: 66 HAEDKLMAKQSHYHVTDHGPHVPQQAPVPAPAPVMGHGYGHNPTGVTSVPPQTYHPTYP 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,084,779
Number of Sequences: 28952
Number of extensions: 190403
Number of successful extensions: 696
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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