Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0113
(581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 134 5e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 134 5e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 134 5e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 134 5e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 134 5e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 134 5e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 134 5e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 134 5e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 134 5e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 134 5e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 134 5e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 134 5e-32
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 134 5e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 134 5e-32
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 134 5e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 134 5e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 134 5e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 134 5e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 134 5e-32
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 134 5e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 132 1e-31
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 132 2e-31
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 126 1e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 110 8e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 83 2e-16
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 64 5e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 64 9e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 60 1e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 54 5e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 3e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 49 2e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 49 2e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 3e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 48 5e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 48 5e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 48 5e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 48 5e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 8e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 47 1e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 1e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 45 4e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 6e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 6e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 1e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 1e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 43 2e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 42 3e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 41 5e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 41 7e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 40 0.001
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 37 0.009
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.011
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.011
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.011
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.034
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.045
At1g11970.1 68414.m01383 hypothetical protein 34 0.060
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.18
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.42
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.42
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.3
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.3
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.3
At5g12280.1 68418.m01444 hypothetical protein 29 1.7
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.3
At1g47680.1 68414.m05297 hypothetical protein 29 2.3
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 5.2
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 6.9
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 9.1
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 124
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 102 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 248
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 124
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 102 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 248
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 124
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 102 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 248
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 124
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 102 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 248
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 124
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 102 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 248
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/75 (52%), Positives = 48/75 (64%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 435
KRKKK Y+ P LAVL+FYK+D +GK+ RLR+EC CGAG FMA DR
Sbjct: 79 KRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDR 138
Query: 436 HYCGKCHSTMVFKDD 480
HYCGKC T V++ +
Sbjct: 139 HYCGKCGLTYVYQKE 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 435
KRKKK Y+ P LAVL+FYKVD +GK+ RLR+EC CGAG FMA DR
Sbjct: 79 KRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDR 138
Query: 436 HYCGKCHSTMVFKDD 480
HYCGKC T V++ +
Sbjct: 139 HYCGKCGLTYVYQKE 153
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 209 KESTLHLV 232
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 130 bits (315), Expect = 5e-31
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 153 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNI 212
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 213 QKESTLHLV 221
Score = 126 bits (305), Expect = 8e-30
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NI 136
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 137 QKESTLHLV 145
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 181
+IFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 229 QIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 209 KESTLHLV 232
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 134 bits (323), Expect = 5e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/77 (53%), Positives = 49/77 (63%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 435
KRKKK Y+ P LAVL+FYKVD +GK+ RL++EC CG G FMA DR
Sbjct: 79 KRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDR 138
Query: 436 HYCGKCHSTMVFKDDDK 486
HYCGKC +T VFK D+
Sbjct: 139 HYCGKCGTTYVFKKADE 155
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 132 bits (320), Expect = 1e-31
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 128 bits (308), Expect = 4e-30
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNI 213
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 118 bits (284), Expect = 3e-27
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+
Sbjct: 2 QIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNV 61
Query: 206 QKESTLHLV 232
Q++STLHL+
Sbjct: 62 QEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 132 bits (319), Expect = 2e-31
Identities = 62/69 (89%), Positives = 68/69 (98%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNI
Sbjct: 80 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNI 139
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 125 bits (302), Expect = 2e-29
Identities = 60/69 (86%), Positives = 65/69 (94%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 156 QIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 215
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 216 QKESTLHLV 224
Score = 116 bits (280), Expect = 9e-27
Identities = 59/70 (84%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYN 202
+IFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYN
Sbjct: 232 QIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYN 291
Query: 203 IQKESTLHLV 232
IQKESTLHLV
Sbjct: 292 IQKESTLHLV 301
Score = 101 bits (241), Expect = 5e-22
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+I KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+I
Sbjct: 4 QIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSI 63
Query: 206 QKESTLHL 229
QK+S LHL
Sbjct: 64 QKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 126 bits (304), Expect = 1e-29
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 80 QIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNI 139
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 115 bits (277), Expect = 2e-26
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+I+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNI
Sbjct: 4 QIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNI 63
Query: 206 QKESTLHLV 232
QKESTLHLV
Sbjct: 64 QKESTLHLV 72
Score = 103 bits (246), Expect = 1e-22
Identities = 55/75 (73%), Positives = 61/75 (81%), Gaps = 4/75 (5%)
Frame = +2
Query: 20 RC--KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP--NQQRLIFAGKQLEDGRT 187
RC +IFVKTLT K I LEVE DTIENVKA +QDKEGI P N QRLIF GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 188 LSDYNIQKESTLHLV 232
L+DY+IQKESTLHLV
Sbjct: 376 LADYSIQKESTLHLV 390
Score = 103 bits (246), Expect = 1e-22
Identities = 51/69 (73%), Positives = 58/69 (84%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I
Sbjct: 553 QIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDI 612
Query: 206 QKESTLHLV 232
K+STL+LV
Sbjct: 613 HKKSTLYLV 621
Score = 98.3 bits (234), Expect = 3e-21
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI
Sbjct: 394 QIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNI 453
Query: 206 QKESTLHL 229
+ ESTLHL
Sbjct: 454 RNESTLHL 461
Score = 90.6 bits (215), Expect = 7e-19
Identities = 49/73 (67%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Frame = +2
Query: 29 IFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 193
IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+
Sbjct: 240 IFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLA 299
Query: 194 DYNIQKESTLHLV 232
YNIQK STL+LV
Sbjct: 300 HYNIQKGSTLYLV 312
Score = 85.4 bits (202), Expect = 2e-17
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Frame = +2
Query: 26 KIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGR 184
+IFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED R
Sbjct: 156 QIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNR 215
Query: 185 TLSDYNIQKESTLHL 229
TL+DY I+ STL L
Sbjct: 216 TLADYGIRNRSTLCL 230
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +2
Query: 38 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 217
+T T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L RTL DYNIQK S
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGS 540
Query: 218 TLH 226
T+H
Sbjct: 541 TIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 110 bits (264), Expect = 8e-25
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ
Sbjct: 88 IFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQ 147
Query: 209 KESTLHLV 232
+S LHL+
Sbjct: 148 NDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+
Sbjct: 2 EIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNL 61
Query: 206 QKESTLHLV 232
++ S LHLV
Sbjct: 62 ERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 166
IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 52 IFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI
Sbjct: 142 RIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNI 201
Query: 206 QKESTL 223
+ ++ L
Sbjct: 202 KPDANL 207
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEV-EPSDTIE 94
+I +KT+ GK+I LEV + SDTI+
Sbjct: 97 RISIKTVKGKSINLEVADSSDTID 120
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 63.7 bits (148), Expect = 9e-11
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 214
+KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++
Sbjct: 28 IKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENG 87
Query: 215 STLHLV 232
TLHL+
Sbjct: 88 HTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/72 (40%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +2
Query: 20 RCKIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 196
R +IFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 197 YNIQKESTLHLV 232
Y+I+++++L LV
Sbjct: 154 YSIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDY 199
KIFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 2 KIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEEN 61
Query: 200 NIQKES 217
N+ + S
Sbjct: 62 NVVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 214
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 215 STLHLV 232
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 214
V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 215 STLHLV 232
T+H+V
Sbjct: 82 HTVHMV 87
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 196
KIFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 197 YNIQKES 217
+ + S
Sbjct: 62 NKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 196
KIFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 197 YNIQKES 217
+ + S
Sbjct: 62 NKVAENS 68
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
+++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I
Sbjct: 3 VYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMIL 62
Query: 209 KESTLHL 229
ES L L
Sbjct: 63 FESRLLL 69
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 196
K+ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 197 YNIQKESTL 223
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 196
K+ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 197 YNIQKESTL 223
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 196
K+ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 197 YNIQKESTL 223
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSD 196
K+ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL +
Sbjct: 2 KLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVE 61
Query: 197 YNIQKESTL 223
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 202
+I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY+
Sbjct: 12 RIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYH 71
Query: 203 IQKESTLHLV 232
+++ TL+LV
Sbjct: 72 VEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/69 (30%), Positives = 42/69 (60%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS +
Sbjct: 2 RITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGV 61
Query: 206 QKESTLHLV 232
+ + L ++
Sbjct: 62 KDDDLLMMM 70
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
K+ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I
Sbjct: 2 KMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDI 61
Query: 206 QKESTLHL 229
+ LHL
Sbjct: 62 LQNPLLHL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 214
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 215 STL 223
S L
Sbjct: 65 SLL 67
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 202
KI VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+ N
Sbjct: 662 KIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQN 721
Query: 203 IQKESTLHLV 232
+Q S +HL+
Sbjct: 722 VQPNSLVHLI 731
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 209 KESTLHLV 232
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 209 KESTLHLV 232
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 202
KI + L GK L V +++ ++KAK K + ++ + GK+LED ++L++ N
Sbjct: 501 KIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQN 560
Query: 203 IQKESTLHLV 232
+Q S +HL+
Sbjct: 561 VQPNSLVHLL 570
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
K+ VK GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++
Sbjct: 537 KLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDV 595
Query: 206 QKESTLHLV 232
+ L L+
Sbjct: 596 GSGAKLMLM 604
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
+ FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 10 QFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS--- 66
Query: 203 IQKESTLHLV 232
Q ++T++LV
Sbjct: 67 -QPDATVNLV 75
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
+F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I
Sbjct: 3 VFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVIL 62
Query: 209 KESTLHL 229
S + L
Sbjct: 63 NHSRIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
K+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I
Sbjct: 3 KVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQI 62
Query: 206 QKESTLHL 229
+ S + L
Sbjct: 63 RHNSRILL 70
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 196
KI VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 2 KIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEA 61
Query: 197 YNIQKESTLHLV 232
+ +S + ++
Sbjct: 62 NKVFDKSVIAII 73
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLSD 196
++F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+ D
Sbjct: 2 QVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDD 61
Query: 197 YNIQKESTLHL 229
Y I+ H+
Sbjct: 62 YKIKACDIFHM 72
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 199
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 200 NIQKESTLHLV 232
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 97
Query: 209 KESTLHL 229
S + L
Sbjct: 98 HNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 136
IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 51 IFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVK 103
KI +KT GKTI LE+E S ++K
Sbjct: 2 KILIKTEKGKTINLELEDSSETIDIK 27
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 163
K V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 2 KFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 26 KIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 163
K V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 2 KFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 178
+F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 3 VFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.034
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 20 RCKIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R ++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.045
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 65 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 178
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 20 RCKIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 133
R K+ + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 42 RFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 178
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 65 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 223
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 202
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 203 IQKESTLHLV 232
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 232 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 113
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +2
Query: 80 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 196
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 80 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 53 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 205
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 211 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 113
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 74 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 229
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 208 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 113
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 80 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 232
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 120 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 224
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,994,959
Number of Sequences: 28952
Number of extensions: 238294
Number of successful extensions: 767
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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