Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0110
(795 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 168 2e-40
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 164 3e-39
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 162 1e-38
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 162 1e-38
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 157 4e-37
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 154 3e-36
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 152 9e-36
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 144 3e-33
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 143 4e-33
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 141 2e-32
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 136 8e-31
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 135 1e-30
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 135 1e-30
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 134 3e-30
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 132 1e-29
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 132 1e-29
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 131 2e-29
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 129 9e-29
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 128 1e-28
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 128 2e-28
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 127 4e-28
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 122 8e-27
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 122 1e-26
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 122 1e-26
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 120 3e-26
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 120 4e-26
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 119 1e-25
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 118 1e-25
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 118 2e-25
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 117 3e-25
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 117 4e-25
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 116 5e-25
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 116 5e-25
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 116 7e-25
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 116 9e-25
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 116 9e-25
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 115 2e-24
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 114 2e-24
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 114 2e-24
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 113 4e-24
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 113 5e-24
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 113 5e-24
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 112 8e-24
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 112 8e-24
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 112 1e-23
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 112 1e-23
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 111 1e-23
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 111 2e-23
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 111 3e-23
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 111 3e-23
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 110 3e-23
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 110 4e-23
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 110 4e-23
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 109 6e-23
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 109 8e-23
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 109 1e-22
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 108 1e-22
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 108 2e-22
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 107 2e-22
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 107 3e-22
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 107 3e-22
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 106 6e-22
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 106 6e-22
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 106 7e-22
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 105 1e-21
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 105 1e-21
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 105 1e-21
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 105 1e-21
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 105 1e-21
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 105 2e-21
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 104 2e-21
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 104 2e-21
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 104 3e-21
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 103 4e-21
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 103 4e-21
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 103 4e-21
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 103 5e-21
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 103 7e-21
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 102 9e-21
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 102 1e-20
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 102 1e-20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 102 1e-20
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 102 1e-20
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 101 3e-20
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 100 4e-20
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 100 5e-20
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 100 5e-20
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 100 5e-20
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 99 6e-20
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 100 8e-20
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 99 1e-19
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 99 1e-19
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 98 2e-19
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 97 3e-19
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 97 3e-19
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 97 3e-19
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 97 3e-19
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 97 4e-19
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 97 4e-19
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 97 6e-19
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 96 8e-19
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 96 1e-18
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 96 1e-18
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 96 1e-18
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 96 1e-18
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 95 1e-18
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 95 2e-18
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 94 3e-18
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 93 6e-18
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 93 7e-18
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 7e-18
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 93 1e-17
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 93 1e-17
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 92 1e-17
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 92 2e-17
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 91 2e-17
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 91 2e-17
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 91 3e-17
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 91 3e-17
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 91 3e-17
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 91 3e-17
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 91 3e-17
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 91 4e-17
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 91 4e-17
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 91 4e-17
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 91 4e-17
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 90 5e-17
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 90 5e-17
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 90 5e-17
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 90 7e-17
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 90 7e-17
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 90 7e-17
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 90 7e-17
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 89 9e-17
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 89 9e-17
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 89 9e-17
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 89 9e-17
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 89 9e-17
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 89 1e-16
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 89 1e-16
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 89 1e-16
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 89 1e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 89 1e-16
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 89 1e-16
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 89 1e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 89 2e-16
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 89 2e-16
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 89 2e-16
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 89 2e-16
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 89 2e-16
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 89 2e-16
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 89 2e-16
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 89 2e-16
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 89 2e-16
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 89 2e-16
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 89 2e-16
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 88 2e-16
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 88 2e-16
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 88 2e-16
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 88 2e-16
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 88 2e-16
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 88 3e-16
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 88 3e-16
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 88 3e-16
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 87 4e-16
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 87 4e-16
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 87 4e-16
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 87 4e-16
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 87 5e-16
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 87 5e-16
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 5e-16
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 87 5e-16
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 87 5e-16
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 87 5e-16
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 87 6e-16
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 87 6e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 87 6e-16
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 87 6e-16
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 86 8e-16
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 86 8e-16
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 86 1e-15
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 86 1e-15
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 86 1e-15
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 85 1e-15
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 85 1e-15
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 85 1e-15
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 85 1e-15
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 85 1e-15
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 85 1e-15
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 85 1e-15
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 85 2e-15
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 2e-15
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 85 2e-15
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 85 2e-15
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 85 2e-15
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 85 2e-15
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 85 3e-15
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 84 3e-15
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 84 3e-15
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 84 3e-15
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 84 3e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 84 3e-15
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 84 3e-15
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 84 4e-15
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 84 4e-15
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 84 4e-15
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 84 4e-15
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 84 4e-15
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 84 4e-15
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 84 4e-15
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 84 4e-15
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 83 6e-15
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 83 6e-15
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 83 6e-15
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 83 6e-15
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 83 6e-15
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 83 6e-15
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 83 8e-15
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 83 8e-15
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 83 8e-15
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 8e-15
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 83 8e-15
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 83 1e-14
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 83 1e-14
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 83 1e-14
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 82 1e-14
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 82 1e-14
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 82 2e-14
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 82 2e-14
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 2e-14
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 82 2e-14
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 82 2e-14
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 82 2e-14
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 81 2e-14
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 81 2e-14
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 81 2e-14
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 81 2e-14
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 81 2e-14
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 81 2e-14
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 81 2e-14
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 81 2e-14
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 81 3e-14
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 3e-14
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 81 3e-14
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 81 3e-14
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 81 4e-14
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 81 4e-14
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 81 4e-14
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 81 4e-14
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 81 4e-14
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 81 4e-14
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 81 4e-14
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 81 4e-14
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 80 5e-14
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 80 5e-14
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 80 5e-14
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 80 7e-14
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 80 7e-14
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 80 7e-14
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 80 7e-14
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 80 7e-14
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 80 7e-14
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 80 7e-14
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 80 7e-14
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 80 7e-14
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 80 7e-14
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 80 7e-14
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 79 1e-13
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 79 1e-13
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 79 1e-13
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 79 1e-13
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 79 1e-13
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 79 1e-13
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 79 1e-13
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 79 1e-13
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 79 2e-13
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 79 2e-13
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 79 2e-13
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 79 2e-13
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 2e-13
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 78 2e-13
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 78 2e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 78 2e-13
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 78 2e-13
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 78 2e-13
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 78 3e-13
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 78 3e-13
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 78 3e-13
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 78 3e-13
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 78 3e-13
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 78 3e-13
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 77 4e-13
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 77 4e-13
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 77 4e-13
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 77 4e-13
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 77 4e-13
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 77 4e-13
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 77 4e-13
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 77 4e-13
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 77 4e-13
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 77 4e-13
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 77 5e-13
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 77 5e-13
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 77 5e-13
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 77 5e-13
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 77 7e-13
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 76 9e-13
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 76 9e-13
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 76 9e-13
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 76 9e-13
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 76 9e-13
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 76 9e-13
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 76 9e-13
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 76 9e-13
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 76 9e-13
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 76 1e-12
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 76 1e-12
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 1e-12
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 76 1e-12
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 76 1e-12
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 76 1e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 76 1e-12
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 76 1e-12
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 76 1e-12
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 75 2e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 2e-12
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 75 2e-12
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 2e-12
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 75 2e-12
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 75 2e-12
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 75 2e-12
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 75 2e-12
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 75 2e-12
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 75 2e-12
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 75 2e-12
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 75 2e-12
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 75 2e-12
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 2e-12
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 2e-12
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 75 3e-12
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 75 3e-12
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 75 3e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 75 3e-12
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 75 3e-12
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 75 3e-12
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 75 3e-12
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 75 3e-12
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 74 4e-12
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 74 4e-12
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 74 4e-12
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 74 4e-12
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 74 4e-12
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 74 5e-12
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 74 5e-12
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 74 5e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 74 5e-12
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 74 5e-12
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 74 5e-12
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 73 6e-12
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 73 6e-12
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 73 6e-12
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 73 6e-12
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 73 6e-12
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 73 6e-12
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 73 8e-12
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 73 8e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 8e-12
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 73 8e-12
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 73 8e-12
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 73 8e-12
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 73 8e-12
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 73 8e-12
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 8e-12
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 73 8e-12
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 73 8e-12
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 73 1e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 73 1e-11
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 73 1e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 73 1e-11
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 73 1e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 1e-11
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 73 1e-11
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 1e-11
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 72 1e-11
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 72 1e-11
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 72 1e-11
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 2e-11
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 72 2e-11
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 72 2e-11
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 72 2e-11
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 72 2e-11
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 72 2e-11
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 72 2e-11
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 72 2e-11
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 72 2e-11
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 2e-11
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 72 2e-11
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 71 3e-11
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 71 3e-11
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 71 3e-11
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 71 3e-11
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 71 3e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 71 3e-11
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 71 3e-11
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 3e-11
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 71 3e-11
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 71 3e-11
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 71 3e-11
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 71 3e-11
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 71 3e-11
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 71 4e-11
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 71 4e-11
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 71 4e-11
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 71 4e-11
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 71 4e-11
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 71 4e-11
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 70 6e-11
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 70 6e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 70 6e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 70 6e-11
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 70 6e-11
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 70 6e-11
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 70 6e-11
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 70 6e-11
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 70 6e-11
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 70 8e-11
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 70 8e-11
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 70 8e-11
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 70 8e-11
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 70 8e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 8e-11
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 70 8e-11
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 70 8e-11
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 70 8e-11
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 70 8e-11
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 70 8e-11
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 70 8e-11
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 70 8e-11
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 69 1e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 69 1e-10
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 69 1e-10
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 69 1e-10
UniRef50_Q5KAW6 Cluster: RNA helicase, putative; n=2; Filobasidi... 69 1e-10
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 69 1e-10
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 69 1e-10
UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whol... 69 1e-10
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 69 1e-10
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 69 1e-10
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 2e-10
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 2e-10
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 2e-10
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 69 2e-10
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 69 2e-10
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 69 2e-10
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 69 2e-10
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 69 2e-10
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 69 2e-10
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 68 2e-10
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 68 2e-10
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 68 2e-10
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 168 bits (408), Expect = 2e-40
Identities = 77/92 (83%), Positives = 87/92 (94%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ C++G APK +QARDLERGVEIVIATPGRLIDFLE+GTT+L+RCTYLVLDEADRMLDMG
Sbjct: 261 NTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG 320
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRKI++QIRPDRQ LMWSATWPKEV+ L
Sbjct: 321 FEPQIRKIMQQIRPDRQVLMWSATWPKEVRQL 352
Score = 117 bits (282), Expect = 3e-25
Identities = 52/64 (81%), Positives = 59/64 (92%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG ++VRNT
Sbjct: 203 TGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNT 262
Query: 244 CVFG 255
C+FG
Sbjct: 263 CIFG 266
Score = 105 bits (252), Expect = 1e-21
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +2
Query: 506 ELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTI 685
+LAE++L +YIQ+NIGSL LSANHNILQIVD+C E+EK KL LL +I S E KTI
Sbjct: 351 QLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDI--SAENETKTI 408
Query: 686 IFVETKRKAENISRNIRRYGWPAVCI 763
IFVETK++ + I+RNI R GW A I
Sbjct: 409 IFVETKKRVDEITRNISRQGWRACAI 434
Score = 40.3 bits (90), Expect = 0.054
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGVPQ 64
IQAQGWPIAMSG++LVGV Q
Sbjct: 183 IQAQGWPIAMSGRDLVGVAQ 202
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 164 bits (398), Expect = 3e-39
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ CV+G APK Q RDLERG EIVIATPGRLIDFLE+G TNL+RCTYLVLDEADRMLDMG
Sbjct: 226 NTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG 285
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRKI+ QIRPDRQ LMWSATWPKEV+NL
Sbjct: 286 FEPQIRKIMGQIRPDRQVLMWSATWPKEVRNL 317
Score = 114 bits (275), Expect = 2e-24
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LAE++L DYIQINIGSL LSANHNILQIVD+C+++EK+ KL LL EI S E KTII
Sbjct: 317 LAEEFLNDYIQINIGSLNLSANHNILQIVDVCEDYEKDQKLMKLLTEI--SAENETKTII 374
Query: 689 FVETKRKAENISRNIRRYGWPAVCI 763
FVETKR+ ++I+RNI R GW AV I
Sbjct: 375 FVETKRRVDDITRNINRNGWRAVSI 399
Score = 106 bits (254), Expect = 7e-22
Identities = 50/64 (78%), Positives = 53/64 (82%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELAQQIQQVA DFG NT
Sbjct: 168 TGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNT 227
Query: 244 CVFG 255
CVFG
Sbjct: 228 CVFG 231
Score = 33.1 bits (72), Expect = 8.3
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGVPQ 64
IQAQG PIA+SG+++VG+ Q
Sbjct: 148 IQAQGMPIALSGRDMVGIAQ 167
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 162 bits (393), Expect = 1e-38
Identities = 76/92 (82%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ C++G A K Q RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLVLDEADRMLDMG
Sbjct: 335 YTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG 394
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRKIIEQIRPDRQ LMWSATWPKEV+ L
Sbjct: 395 FEPQIRKIIEQIRPDRQVLMWSATWPKEVQAL 426
Score = 103 bits (247), Expect = 5e-21
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LAED+L DYIQINIGSL LSANHNI QIVD+C+E EKE KL LL+EI S + +K
Sbjct: 424 QALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLSLLKEI--SSDVNSKI 481
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
IIFVETK+K E++ +NI R G+ A I
Sbjct: 482 IIFVETKKKVEDLLKNIVRDGYGATSI 508
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS--YVR 237
TGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG S +R
Sbjct: 275 TGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIR 334
Query: 238 NTCVFGVLLK 267
TC+FG LK
Sbjct: 335 YTCIFGGALK 344
Score = 38.7 bits (86), Expect = 0.17
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGVPQ 64
IQAQGWPIA+SG++LVG+ Q
Sbjct: 255 IQAQGWPIALSGRDLVGIAQ 274
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 162 bits (393), Expect = 1e-38
Identities = 76/92 (82%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ CV+G APK Q RDL+RG EIVIATPGRLIDFL G+TNL+RCTYLVLDEADRMLDMG
Sbjct: 385 NTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMG 444
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRKI+ QIRPDRQTLMWSATWPKEVK L
Sbjct: 445 FEPQIRKIVSQIRPDRQTLMWSATWPKEVKQL 476
Score = 122 bits (293), Expect = 1e-26
Identities = 56/64 (87%), Positives = 60/64 (93%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +SYVRNT
Sbjct: 327 TGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNT 386
Query: 244 CVFG 255
CVFG
Sbjct: 387 CVFG 390
Score = 106 bits (254), Expect = 7e-22
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
++LAED+LG+YIQINIGSL+LSANHNI Q+VD+C E KE KL LL +I + E K
Sbjct: 474 KQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKI 533
Query: 683 IIFVETKRKAENISRNIRRYG 745
IIFVETKR+ +N+ R IR +G
Sbjct: 534 IIFVETKRRVDNLVRFIRSFG 554
Score = 37.9 bits (84), Expect = 0.29
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGV 58
IQAQGWPIAMSG N VG+
Sbjct: 307 IQAQGWPIAMSGSNFVGI 324
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 157 bits (380), Expect = 4e-37
Identities = 74/92 (80%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ C++G A K QA DL RGVEIVIATPGRLIDFLE GTTNL+R TYLVLDEADRMLDMG
Sbjct: 205 NTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMG 264
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRKII QIRPDRQ LMWSATWPKE++ L
Sbjct: 265 FEPQIRKIISQIRPDRQVLMWSATWPKEIRKL 296
Score = 108 bits (260), Expect = 1e-22
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG + NT
Sbjct: 147 TGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIMNT 206
Query: 244 CVFG 255
C+FG
Sbjct: 207 CIFG 210
Score = 96.7 bits (230), Expect = 6e-19
Identities = 46/81 (56%), Positives = 64/81 (79%)
Frame = +2
Query: 506 ELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTI 685
+LAE++L +YIQINIGSL L+AN NI+QI++ C+E+EKE +L LL E+ SQ+ +K+I
Sbjct: 295 KLAEEFLREYIQINIGSLNLAANENIMQIIECCEEYEKETRLFKLLTEL--SQQGDSKSI 352
Query: 686 IFVETKRKAENISRNIRRYGW 748
IFVETKRK + I+ I+R GW
Sbjct: 353 IFVETKRKVDQITNVIKRNGW 373
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 154 bits (373), Expect = 3e-36
Identities = 74/102 (72%), Positives = 84/102 (82%), Gaps = 1/102 (0%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G APK Q RDL RGVEIVIATPGRLID LE G TNL+R TYLVLDEADRMLDMGFE
Sbjct: 357 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFE 416
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWETTFRSI 548
PQIRKI+ QIRPDRQTL WSATWP+EV++L R + ++ I
Sbjct: 417 PQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVI 458
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG S R+T
Sbjct: 297 TGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRST 356
Query: 244 CVFG 255
C++G
Sbjct: 357 CIYG 360
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/87 (37%), Positives = 55/87 (63%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
E LA +L + ++ IGS L ANH+I QI+++ EHEK +L+ LL ++ G++
Sbjct: 444 ESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDL----MDGSRI 499
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
+IF +TK+ + ++R +R GWPA+ I
Sbjct: 500 LIFFQTKKDCDKVTRQLRMDGWPALSI 526
Score = 36.3 bits (80), Expect = 0.89
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQ+QGWP+A+ G++++G+ Q
Sbjct: 276 PIQSQGWPMALKGRDMIGIAQ 296
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 152 bits (369), Expect = 9e-36
Identities = 73/92 (79%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ CV+G PK Q RDL RGVE+ IATPGRLID LE G TNL+R TYLVLDEADRMLDMG
Sbjct: 238 NTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMG 297
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRKII QIRPDRQTLMWSATWPKEV+ L
Sbjct: 298 FEPQIRKIIGQIRPDRQTLMWSATWPKEVRAL 329
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/64 (68%), Positives = 50/64 (78%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG +S +RNT
Sbjct: 180 TGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNT 239
Query: 244 CVFG 255
CV+G
Sbjct: 240 CVYG 243
Score = 83.0 bits (196), Expect = 8e-15
Identities = 39/85 (45%), Positives = 63/85 (74%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA D+L D+IQ+NIGS++L+ANH I QIV++ E EK +++ ++++ +++E K +I
Sbjct: 329 LASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKE--NKILI 386
Query: 689 FVETKRKAENISRNIRRYGWPAVCI 763
FV TKR A+ I+R +R+ GWPA+ I
Sbjct: 387 FVGTKRVADEITRFLRQDGWPALSI 411
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGVPQRVPAKRWPTSCQP 103
IQ+QGWP+A+SG+++VG+ + K T C P
Sbjct: 160 IQSQGWPMALSGRDVVGIAETGSGKTL-TYCLP 191
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 144 bits (348), Expect = 3e-33
Identities = 66/88 (75%), Positives = 72/88 (81%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G PKR Q + GVEI IA PGRLID LE+G TNL R TYLVLDEADRMLDMGFEPQIR
Sbjct: 98 GVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIR 157
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
K++ QIRPDRQTL+WSATWPKEV+ L R
Sbjct: 158 KLVSQIRPDRQTLLWSATWPKEVQKLAR 185
Score = 86.6 bits (205), Expect = 6e-16
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG +RNT
Sbjct: 34 TGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGSIFKLRNT 93
Query: 244 CVFGVLLKESKPGTWR 291
++G + K + + R
Sbjct: 94 AIYGGVPKRPQQASIR 109
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +2
Query: 503 EELAEDYLGDY-IQINIGSLQ-LSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGA 676
++LA D + I IN+GS+ L A+HNI Q V++ +E EK+ +L + L ++ P
Sbjct: 181 QKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKARLKMFLGQVMVESAP-- 238
Query: 677 KTIIFVETKRKAENISRNIRRYGWPAVCI 763
K +IF ETKR A+ +++ +R GWPA+CI
Sbjct: 239 KVLIFCETKRGADILTKELRLDGWPALCI 267
Score = 33.1 bits (72), Expect = 8.3
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGVPQ 64
IQ QGWP+A+SG +++G+ +
Sbjct: 14 IQVQGWPVALSGHDMIGIAE 33
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 143 bits (347), Expect = 4e-33
Identities = 68/94 (72%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 HVCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ C++G KR+Q DL+ GVEIVIATPGRLIDFL TNL+RC+YLVLDEADRMLDMG
Sbjct: 191 NTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLDMG 250
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
FEPQIR IIEQIRPD QTLMWSATWP V L++
Sbjct: 251 FEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVK 284
Score = 123 bits (297), Expect = 5e-27
Identities = 57/95 (60%), Positives = 75/95 (78%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
L +DYL DYIQIN+GSL+L+ANHNILQI+D+CQEHEKE KL++LL+EI +E KTII
Sbjct: 282 LVKDYLKDYIQINVGSLKLAANHNILQIIDVCQEHEKEAKLSILLREIMAEKE--CKTII 339
Query: 689 FVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
F+ETK++ ++I+R + R GWPA+CI K R E
Sbjct: 340 FIETKKRVDDITRKVLRDGWPAMCIHGDKSQRERE 374
Score = 101 bits (243), Expect = 2e-20
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++NT
Sbjct: 133 TGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIKNT 192
Query: 244 CVFG 255
C+FG
Sbjct: 193 CLFG 196
Score = 39.1 bits (87), Expect = 0.13
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGV 58
PIQ+QGWPIAMSG+++VG+
Sbjct: 112 PIQSQGWPIAMSGRDMVGI 130
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 141 bits (341), Expect = 2e-32
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V G PKR Q L RGVEI+IA PGRLIDFLE TNL+R TYLVLDEADRMLDMGFE
Sbjct: 316 VAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEADRMLDMGFE 375
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
PQIRKI+ QIRPDRQTLM+SATWPKEV L R
Sbjct: 376 PQIRKIVGQIRPDRQTLMFSATWPKEVIALSR 407
Score = 86.6 bits (205), Expect = 6e-16
Identities = 40/64 (62%), Positives = 51/64 (79%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG +S ++ +
Sbjct: 256 TGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTS 315
Query: 244 CVFG 255
+G
Sbjct: 316 VAYG 319
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +2
Query: 530 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 709
+ + +NIGSL L+ HNI Q V I +E EK KL LL+++ G K +IF ETK+
Sbjct: 413 EVVHVNIGSLDLTTCHNIEQNVFILEEREKRVKLKELLKKLMD----GGKILIFSETKKG 468
Query: 710 AENISRNIRRYGWPAVCI 763
A+ ++R +R GWPA+CI
Sbjct: 469 ADTLTRELRLDGWPALCI 486
Score = 35.1 bits (77), Expect = 2.0
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQ Q WPIA+SG++++G+ +
Sbjct: 235 PIQVQSWPIALSGRDMIGIAE 255
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 136 bits (328), Expect = 8e-31
Identities = 68/104 (65%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +3
Query: 204 CCRFWTHILCS*HVCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 380
C +F + S VCV+G APK Q ++L G +IVIATPGRLIDFLE +L+R TYL
Sbjct: 306 CFKFGSKCKIS-SVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYL 364
Query: 381 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
VLDEADRMLDMGFEP IRKI+ QIRPDRQTLM+SATWP+ V+ L
Sbjct: 365 VLDEADRMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRL 408
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG + +
Sbjct: 259 TGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKISSV 318
Query: 244 CVFG 255
CV+G
Sbjct: 319 CVYG 322
Score = 47.6 bits (108), Expect = 4e-04
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +2
Query: 494 QRSEELAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP 670
Q LA D+ GD I I IG ++ + N++I Q V+I + +K +++ +L + +S
Sbjct: 403 QTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQQVEIIDKSQKYDRVKEILSTMTRSD-- 460
Query: 671 GAKTIIFVETKRKAENISRNIRRYGWPAVCIMAIKLTR-RDE 793
KTIIF +TK+ +++S+ ++ +CI K R RD+
Sbjct: 461 --KTIIFTQTKKDCDDLSKALQTDNIRNICIHGDKSQRDRDK 500
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 135 bits (327), Expect = 1e-30
Identities = 66/90 (73%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G A K Q L++GV++VIATPGRLIDFLE TT L+R TYLVLDEADRMLDMGFE
Sbjct: 207 CIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFE 266
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
QIRKI+ QIRPDRQTLM+SATWPK V+NL
Sbjct: 267 IQIRKILGQIRPDRQTLMFSATWPKNVQNL 296
Score = 89.8 bits (213), Expect = 7e-17
Identities = 38/64 (59%), Positives = 53/64 (82%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG +S ++
Sbjct: 147 TGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCA 206
Query: 244 CVFG 255
C++G
Sbjct: 207 CIYG 210
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 503 EELAEDYLGDY-IQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAK 679
+ LA+DY + + + IG +L+ N I QIV + + +K N+L L + Q K
Sbjct: 294 QNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIKQLDCLTQKD----K 349
Query: 680 TIIFVETKRKAENISRNIRRYGWPAVCI 763
+IF +TK+ E++SR + + G+ + I
Sbjct: 350 VLIFAQTKKGCESMSRILNKEGFKCLAI 377
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 135 bits (326), Expect = 1e-30
Identities = 66/105 (62%), Positives = 76/105 (72%)
Frame = +3
Query: 204 CCRFWTHILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 383
C +F T G PK Q L++GV I+IA PGRLID LE+ TNL R TYLV
Sbjct: 206 CIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLV 265
Query: 384 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
LDEAD+MLDMGFE QIRKI++QIRPDRQTLMWSATWPKEV+ L +
Sbjct: 266 LDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAK 310
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/79 (55%), Positives = 55/79 (69%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ + TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFS 210
Query: 220 HTSYVRNTCVFGVLLKESK 276
S +RNTC +G + K +
Sbjct: 211 TESKIRNTCAYGGVPKSGQ 229
Score = 36.7 bits (81), Expect = 0.67
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVG 55
PIQ QGWPIA+SGK+++G
Sbjct: 138 PIQIQGWPIALSGKDMIG 155
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 134 bits (323), Expect = 3e-30
Identities = 66/92 (71%), Positives = 74/92 (80%), Gaps = 5/92 (5%)
Frame = +3
Query: 258 APKREQARDLER-----GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
AP RE A +++ GVEIVIATPGRLID +E TNL+R TYLVLDEADRMLDMGFE
Sbjct: 173 APTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFE 232
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
PQI+KI+ QIRPDRQTL WSATWPKEV+ L R
Sbjct: 233 PQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 264
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/52 (76%), Positives = 43/52 (82%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 139 TGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
Score = 69.7 bits (163), Expect = 8e-11
Identities = 37/87 (42%), Positives = 57/87 (65%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
E+LA ++L D ++ IGS +L ANH I Q V+I E +K NKL LL++I G++
Sbjct: 260 EQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDI----MDGSRI 315
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
+IF++TK+ + I+R +R GWPA+ I
Sbjct: 316 LIFMDTKKGCDQITRQLRMDGWPALSI 342
Score = 35.5 bits (78), Expect = 1.5
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQ+QGWP+A+ G++L+G+ +
Sbjct: 118 PIQSQGWPMALRGRDLIGIAE 138
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 132 bits (319), Expect = 1e-29
Identities = 61/91 (67%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VC++G APK Q RDLERG +IV+ATPGRL D LE +L + +YLVLDEADRMLDMGF
Sbjct: 335 VCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGF 394
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
EPQIRKI++Q++P RQTLM++ATWPKEV+ +
Sbjct: 395 EPQIRKIVKQVQPKRQTLMFTATWPKEVRKI 425
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 506 ELAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
++A D L + +Q+NIG+ QL AN +I Q VD+ EK +L+ +L+ SQEPG+K
Sbjct: 424 KIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILR----SQEPGSKI 479
Query: 683 IIFVETKRKAENISRNI-RRYGWPAV 757
IIF TKR + ++RN+ R+YG A+
Sbjct: 480 IIFCSTKRMCDQLARNLARQYGASAI 505
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG +S + +
Sbjct: 277 TGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSV 335
Query: 244 CVFG 255
C++G
Sbjct: 336 CLYG 339
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 132 bits (318), Expect = 1e-29
Identities = 59/86 (68%), Positives = 70/86 (81%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA K Q R+L+ G EI++ATPGRL++FL GT L R +Y V+DEADRMLDMGFEPQIR
Sbjct: 428 GASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIR 487
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI+ QIRPDRQTLM+SATWP E+K L
Sbjct: 488 KIVGQIRPDRQTLMFSATWPSEIKRL 513
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A + +R
Sbjct: 365 TGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPYSRLLNLRLV 423
Query: 244 CVFG 255
++G
Sbjct: 424 PIYG 427
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 131 bits (316), Expect = 2e-29
Identities = 63/90 (70%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
CV+G APK Q L RGV I++ATPGRLIDFL+ NL R TYLVLDEADRMLDMGFE
Sbjct: 207 CVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFE 266
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQ+RKI QIRPDRQT+M+SATWP+E++ L
Sbjct: 267 PQVRKICGQIRPDRQTVMFSATWPREIQRL 296
Score = 70.1 bits (164), Expect = 6e-11
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++
Sbjct: 148 TGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEE 193
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/97 (30%), Positives = 57/97 (58%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA ++ +I+I++GS +L AN ++ Q + QE K+++L L+QE + +
Sbjct: 294 QRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQEFAKQDELRKLMQEHREE-----RV 348
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
++F + KR A+ + R +RR+G+ A+ I K R+ E
Sbjct: 349 LVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQRE 385
Score = 35.1 bits (77), Expect = 2.0
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGV 58
P+QAQ WP+ +SG++LVGV
Sbjct: 127 PVQAQSWPVLLSGRDLVGV 145
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 129 bits (311), Expect = 9e-29
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
CV+G PK Q R L GV + IATPGRLID LE TNL R TYL LDEADRMLDMGFE
Sbjct: 252 CVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFE 311
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
QIRKI QIR DRQTLM+SATWP+E++NL
Sbjct: 312 DQIRKICSQIRTDRQTLMFSATWPREIRNL 341
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVRN 240
TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ + +
Sbjct: 191 TGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIMT 250
Query: 241 TCVFG 255
TCV+G
Sbjct: 251 TCVYG 255
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/77 (27%), Positives = 46/77 (59%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA + D+++++IGS +L AN ++ Q V + + + KE K+ +L+++G + ++
Sbjct: 341 LAASFQKDFVRVHIGSEELVANADVHQHVFVVEGYHKEEKMEEILRQVGPQ-----RVLV 395
Query: 689 FVETKRKAENISRNIRR 739
FV+TK+ + + + R
Sbjct: 396 FVKTKKSCDILQDRLGR 412
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 128 bits (310), Expect = 1e-28
Identities = 59/90 (65%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G APK Q RDL+RGV++V+ATPGRL D LE +L++ +YLVLDEADRMLDMGFE
Sbjct: 255 CLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFE 314
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQIRKI+++I P RQTLM++ATWPKEV+ +
Sbjct: 315 PQIRKIVKEIPPRRQTLMYTATWPKEVRRI 344
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG +S + +T
Sbjct: 196 TGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFGRSSRISST 254
Query: 244 CVFG 255
C++G
Sbjct: 255 CLYG 258
Score = 50.8 bits (116), Expect = 4e-05
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 455 PRQTDFDVVSYLAQRSEELAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKL 631
PR+ + + +AED L +Q+ IGS+ +L AN I Q V++ EK +L
Sbjct: 326 PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRL 385
Query: 632 NVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI-RRYGWPAV 757
+L+ SQ+ G+K +IF TKR + ++R + R++G A+
Sbjct: 386 EQILR----SQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAI 424
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 128 bits (308), Expect = 2e-28
Identities = 52/87 (59%), Positives = 71/87 (81%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
C G P+ Q +D + G +I +ATPGRLIDF+++G T+L RCT+L+LDEADRML+MGFE
Sbjct: 260 CFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDEADRMLEMGFEV 319
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVK 506
Q++ II QIRPDRQT+MW+ATWP+ ++
Sbjct: 320 QVQDIIGQIRPDRQTVMWTATWPQAIQ 346
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/95 (32%), Positives = 59/95 (62%)
Frame = +2
Query: 494 QRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 673
Q ++ A ++ +QINIG+ L AN ++ QI+++CQE ++++K+N +++ IG +
Sbjct: 343 QAIQQFALGFMFHPLQINIGNPDLHANESVKQIIEVCQERDRDSKMNEIVKRIGSEK--- 399
Query: 674 AKTIIFVETKRKAENISRNIRRYGWPAVCIMAIKL 778
K +IFV+TKR A+N+ +R + C+ K+
Sbjct: 400 -KVLIFVKTKRSADNLCYKLRDQRYRVACMHGDKV 433
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F + ++
Sbjct: 199 TGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFTKGTAIKTV 258
Query: 244 CVFGVLLKESK 276
FG + + S+
Sbjct: 259 RCFGGVPQSSQ 269
Score = 33.9 bits (74), Expect = 4.7
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQA GWPI + GK++VG+ +
Sbjct: 178 PIQAIGWPIVLQGKDVVGIAE 198
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 127 bits (306), Expect = 4e-28
Identities = 63/92 (68%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+ C++G PK Q RDL++GVEIVIATPGRLID LE TNL+R T +VLDEADRMLDMG
Sbjct: 200 NTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVT-IVLDEADRMLDMG 258
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIRK I PDRQTL WSATWPK V ++
Sbjct: 259 FEPQIRKCISD-TPDRQTLYWSATWPKNVNHV 289
Score = 99.1 bits (236), Expect = 1e-19
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG +S ++NT
Sbjct: 142 TGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNT 201
Query: 244 CVFG 255
C++G
Sbjct: 202 CIYG 205
Score = 37.1 bits (82), Expect = 0.51
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQAQGWP+A+ G++L+G+ +
Sbjct: 121 PIQAQGWPMALKGRDLIGIAE 141
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 122 bits (295), Expect = 8e-27
Identities = 56/90 (62%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G APK Q +++ERGV+IV+ATPGRL D LE +L + +YLVLDEADRMLDMGFE
Sbjct: 266 CLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFE 325
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQIRKI+ ++ RQTLM++ATWPKEV+ +
Sbjct: 326 PQIRKIVNEVPTKRQTLMYTATWPKEVRKI 355
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG +S +
Sbjct: 207 TGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFGKSSKISCA 265
Query: 244 CVFG 255
C++G
Sbjct: 266 CLYG 269
Score = 59.3 bits (137), Expect = 1e-07
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +2
Query: 452 TPRQTDFDVVSYLAQRSEELAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENK 628
T RQT ++ + ++A D L + Q+NIG++ +L AN +I Q +++ EK ++
Sbjct: 337 TKRQTLMYTATW-PKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSR 395
Query: 629 LNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI-RRYGWPAV 757
L +L+ SQEPG+K IIF TKR + ++RN+ R +G A+
Sbjct: 396 LEQILR----SQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAI 435
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 122 bits (294), Expect = 1e-26
Identities = 56/90 (62%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G R Q L +G +I+IA PGRLID L++G T L++ ++LVLDEADRMLDMGFE
Sbjct: 237 CLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEADRMLDMGFE 296
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQIRKI++QIRP RQT+++SATWPKEV+ L
Sbjct: 297 PQIRKIVDQIRPQRQTMLFSATWPKEVQKL 326
Score = 56.8 bits (131), Expect = 6e-07
Identities = 32/64 (50%), Positives = 38/64 (59%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA++LPAIVHI Q R P L+LAPTREL QI F S +
Sbjct: 180 TGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQKFSVGSQLYAA 236
Query: 244 CVFG 255
C++G
Sbjct: 237 CLYG 240
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 122 bits (294), Expect = 1e-26
Identities = 57/90 (63%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G APK Q ++LERG +IV+ATPGRL D LE + Q+ + LVLDEADRMLDMGFE
Sbjct: 540 CLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFE 599
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQIRKI+ +I P RQTLM++ATWPKEV+ +
Sbjct: 600 PQIRKIVNEIPPRRQTLMYTATWPKEVRKI 629
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG +S + T
Sbjct: 481 TGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFGRSSRISCT 539
Query: 244 CVFG 255
C++G
Sbjct: 540 CLYG 543
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +2
Query: 455 PRQTDFDVVSYLAQRSEELAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKL 631
PR+ + + ++A D L + +Q+NIG + +L+AN I Q V++ + EKE +L
Sbjct: 611 PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRL 670
Query: 632 NVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 742
+L+ SQE G+K IIF TKR ++++R++ R+
Sbjct: 671 EQILR----SQERGSKVIIFCSTKRLCDHLARSVGRH 703
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 120 bits (290), Expect = 3e-26
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA + Q R L G E+VIATPGRLID ++G L R T+LVLDEADRMLDMGFEPQ+R
Sbjct: 197 GASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLR 256
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KII + +RQTLMWSATWP+EV+ L
Sbjct: 257 KIIPKTNANRQTLMWSATWPREVRGL 282
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F +R+T
Sbjct: 133 TGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRST 192
Query: 244 CVFG 255
V+G
Sbjct: 193 AVYG 196
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LAE Y+ +YIQ+ +G+ +L N I QIV++C EKE+KL +L G K I+
Sbjct: 282 LAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSGREKEDKLIGVLDNF-----KGDKVIV 336
Query: 689 FVETKRKAENISRNIRRYGWPAVCI 763
F KR +++ + R G+ A +
Sbjct: 337 FCNMKRTCDDLEYVLNRSGYGAAAL 361
Score = 35.1 bits (77), Expect = 2.0
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 5 IQAQGWPIAMSGKNLVGVPQ 64
IQ QGWP+A+SG+++VG+ Q
Sbjct: 113 IQGQGWPMALSGRDMVGIAQ 132
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 120 bits (289), Expect = 4e-26
Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G A KR Q L R +IV+ATPGRLIDFL+ TNL TYLVLDEADRMLDMGFE
Sbjct: 174 CIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDEADRMLDMGFE 233
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
Q+RKI IR DRQT+ +SATWPK V+NL
Sbjct: 234 QQVRKIDSYIREDRQTVFFSATWPKTVQNL 263
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+ + F + +
Sbjct: 117 TGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHISYFSEAYNMNSA 173
Query: 244 CVFG 255
C++G
Sbjct: 174 CIYG 177
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +2
Query: 536 IQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 715
I + IGS +++ N NI Q ++EK+ +L +L+E+ K +IFVETK+ E
Sbjct: 273 INLYIGSQEVTINKNITQETICLYQNEKQEELLYILEELSNKD----KVLIFVETKKDCE 328
Query: 716 NISRNIRRYGW 748
+++ + +G+
Sbjct: 329 DLASYLSEHGF 339
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 119 bits (286), Expect = 1e-25
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 117 QPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWGAPKR-EQARDLER 293
QP+ +R L + ++ CC++ L S VCV+G R EQ +L++
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRS--VCVYGGGNRDEQIEELKK 364
Query: 294 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 473
GV+I+IATPGRL D NL+ TYLVLDEAD+MLDMGFEPQI KI+ +RPDRQT+
Sbjct: 365 GVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTV 424
Query: 474 MWSATWPKEVKNL 512
M SATWP V L
Sbjct: 425 MTSATWPHSVHRL 437
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++ + + +R+
Sbjct: 288 TGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRS 346
Query: 241 TCVFG 255
CV+G
Sbjct: 347 VCVYG 351
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 118 bits (285), Expect = 1e-25
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEP 425
GAP ++Q DL+RG EIV+ TPGR+ID L TNL RCTYLVLDEADRM D+GFEP
Sbjct: 528 GAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEP 587
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
Q+ +II IRPDRQT+++SAT+P+ ++ L R
Sbjct: 588 QVMRIINNIRPDRQTVLFSATFPRAMEALAR 618
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F +R
Sbjct: 464 TGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRAC 523
Query: 244 CVFG 255
C +G
Sbjct: 524 CAYG 527
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 118 bits (284), Expect = 2e-25
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VCV+G R Q DLERG EI+I TPGRL D + ++ TYLVLDEADRMLDMGF
Sbjct: 388 VCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGF 447
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
EPQIRK++ IRPDRQT+M SATWP V+ L
Sbjct: 448 EPQIRKVMLDIRPDRQTIMTSATWPPGVRRL 478
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 237
TG+GKTLA++LP ++H Q P RG G LVLAPTRELA QI+ + ++
Sbjct: 329 TGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG-MK 386
Query: 238 NTCVFG 255
CV+G
Sbjct: 387 AVCVYG 392
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH-EKENKLNVLLQEIGQSQEPGAKTI 685
LA+ Y+ + IQ+ +GSL L+A H++ QI+ + ++ +K N + ++ + + K I
Sbjct: 478 LAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD----KII 533
Query: 686 IFVETKRKAENISRNIRRYGWPAVCI 763
IF K +A+++S + G+ CI
Sbjct: 534 IFCGRKVRADDLSSELTLDGFMTQCI 559
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 117 bits (282), Expect = 3e-25
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G K EQ++ L+ G EIV+ATPGRLID ++ TNL R TYLV DEADRM DMGFEPQ+R
Sbjct: 216 GGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFEPQVR 275
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I +RPDRQTL++SAT+ K+V++L R
Sbjct: 276 SIANNVRPDRQTLLFSATFKKKVEHLCR 303
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/64 (54%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 152 TGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVV 211
Query: 244 CVFG 255
VFG
Sbjct: 212 AVFG 215
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 117 bits (281), Expect = 4e-25
Identities = 62/108 (57%), Positives = 77/108 (71%), Gaps = 4/108 (3%)
Frame = +3
Query: 207 CRFWTHILCS*HVC-VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 374
CR++T IL VC V GA Q DL+RG EIV+ TPGR+ID L TNL+R T
Sbjct: 597 CRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVT 656
Query: 375 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
Y+V+DEADRM D+GFEPQI KII+ IRPDRQ +M+SAT+PK V+ L +
Sbjct: 657 YVVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAK 704
Score = 70.1 bits (164), Expect = 6e-11
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
++F TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQI 593
Score = 35.9 bits (79), Expect = 1.2
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
E+LA+ L I+ +G + A NI QI++ E +K KL +L QE
Sbjct: 700 EQLAKRVLRKPIECIVGG-RGQAGGNIEQIIEFMDESDKLYKLLLLFQEWYTK----GSI 754
Query: 683 IIFVETKRKAENISRNIRRYGW 748
+IFVE + +A+++ + + +YG+
Sbjct: 755 LIFVEKQTEADDLFKELLKYGY 776
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 116 bits (280), Expect = 5e-25
Identities = 56/92 (60%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
HVC++G R Q L EIV ATPGRLIDFL+ G N R +LVLDEADRMLDMG
Sbjct: 189 HVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDMG 248
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQIR II + DR+T M+SATWPKE++ L
Sbjct: 249 FEPQIRAIIASLTKDRETFMFSATWPKEIRQL 280
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F ++
Sbjct: 131 TGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHV 190
Query: 244 CVFG 255
C++G
Sbjct: 191 CIYG 194
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +2
Query: 506 ELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTI 685
+LA D+L + I +++G +L+ N I Q V + QEHEK K +L+E QS+ K I
Sbjct: 279 QLASDFLSNPIHMHVGGEELATNERIQQNVLLLQEHEKGEKCVEILKE-NQSK----KII 333
Query: 686 IFVETKRKAENIS 724
IF +TKR + +S
Sbjct: 334 IFAKTKRTVQQLS 346
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 116 bits (280), Expect = 5e-25
Identities = 49/92 (53%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 VCVWGAP--KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
VC++G K++Q +++G+ +++ATPGRLI+ +++G NL + T L+LDEADRMLDMG
Sbjct: 180 VCIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMG 239
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FEPQ+R I+ IR DRQT++ SATWP EV+ L
Sbjct: 240 FEPQVRDIVSTIREDRQTILLSATWPNEVQQL 271
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TGSGKTLAY+LPA+VH+ I P L+L PTREL QI
Sbjct: 105 TGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQI 148
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 116 bits (279), Expect = 7e-25
Identities = 52/87 (59%), Positives = 72/87 (82%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G K EQ + L+ GVEI+IATPGRL++ ++K TNL+RCTY+V+DEAD+M MGFE QIR
Sbjct: 172 GENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIR 231
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLL 515
I++QIRPDRQTL+++AT K+++NL+
Sbjct: 232 SIMQQIRPDRQTLLFTATLKKKIQNLV 258
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + + + + N
Sbjct: 108 TGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRY---AKIYNI 164
Query: 244 CVFGVLLKESKPGTWR 291
V +L E+K W+
Sbjct: 165 SVGALLGGENKHEQWK 180
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 116 bits (278), Expect = 9e-25
Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VC++G +R Q + GVEI+IATPGRL D +++G ++ TYL+LDEADRMLDMGF
Sbjct: 211 VCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMGF 270
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
EPQIRK++ +RPDRQT+M SATWP V+ L
Sbjct: 271 EPQIRKVLLDVRPDRQTVMTSATWPDGVRRL 301
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSYVR 237
TG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A + ++
Sbjct: 152 TGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG-IK 209
Query: 238 NTCVFG 255
C++G
Sbjct: 210 AVCLYG 215
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/72 (34%), Positives = 44/72 (61%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA+ Y+ D IQ+ IG+L L+A H + Q++++ E +K ++N E + +P K II
Sbjct: 301 LAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDEEDKFQRIN----EFVRDMQPTDKVII 356
Query: 689 FVETKRKAENIS 724
F K +A+++S
Sbjct: 357 FCGKKTRADDLS 368
Score = 34.3 bits (75), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQAQ WPI + G++L+G+ Q
Sbjct: 131 PIQAQAWPILLRGEDLIGIAQ 151
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 116 bits (278), Expect = 9e-25
Identities = 56/95 (58%), Positives = 74/95 (77%), Gaps = 4/95 (4%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 413
CV+G AP EQ ++++ +IV+ATPGRLID L + TNL R TYLVLDEADRM DM
Sbjct: 582 CVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDM 641
Query: 414 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
GFEPQ+ KI+ IRPDRQT+++SAT+PK++++L R
Sbjct: 642 GFEPQVMKILNNIRPDRQTVLFSATFPKQMESLAR 676
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F +R
Sbjct: 522 TGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAA 581
Query: 244 CVFG 255
CV+G
Sbjct: 582 CVYG 585
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 115 bits (276), Expect = 2e-24
Identities = 54/96 (56%), Positives = 74/96 (77%), Gaps = 4/96 (4%)
Frame = +3
Query: 243 VCVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLD 410
VCV+G EQ +L+RG EI++ TPGR+ID L + TNL+R TY+VLDEADRM D
Sbjct: 615 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD 674
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
MGFEPQ+ +II+ +RPDRQT+M+SAT+P++++ L R
Sbjct: 675 MGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 710
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F + +R
Sbjct: 556 TGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPV 615
Query: 244 CVFG 255
CV+G
Sbjct: 616 CVYG 619
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 114 bits (275), Expect = 2e-24
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA + QA DL +V+ATPGRLIDF+E G + R +LVLDEAD+MLDMGFEPQIR
Sbjct: 235 GAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIR 294
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KII I DRQT+M+SATWPKE++ L
Sbjct: 295 KIIGHISKDRQTMMFSATWPKEIQQL 320
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA F +R T
Sbjct: 171 TGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQT 230
Query: 244 CVFG 255
C+FG
Sbjct: 231 CLFG 234
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
++LA D+L D + + IG+ L+ N NI Q++ C+E EK +K +L E K
Sbjct: 318 QQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKCLEVLNE-----HKDDKI 372
Query: 683 IIFVETKRKAENISRNIRRYGWPA 754
IIF +TKR +++ N+ G+ A
Sbjct: 373 IIFTKTKRTTDDLQENLNMKGFQA 396
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 114 bits (275), Expect = 2e-24
Identities = 53/88 (60%), Positives = 67/88 (76%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G K EQ ++L+ G EIV+ATPGRLID L+ + R +YLVLDEADRM D+GFEPQ+R
Sbjct: 338 GMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVR 397
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I+ QIRPDRQTL++SAT P +V+ L R
Sbjct: 398 SIVGQIRPDRQTLLFSATMPWKVEKLAR 425
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F +R +
Sbjct: 274 TGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVS 333
Query: 244 CVFGVLLKESK 276
V+G + K +
Sbjct: 334 AVYGGMSKHEQ 344
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 113 bits (273), Expect = 4e-24
Identities = 54/96 (56%), Positives = 71/96 (73%), Gaps = 4/96 (4%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLD 410
VC +G AP REQ +L+RG EI++ TPGR+ID L TNL+R TY+VLDEADRM D
Sbjct: 702 VCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFD 761
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
MGFEPQ+ KI +RPDRQT+++SAT P+ + +L +
Sbjct: 762 MGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTK 797
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F +R
Sbjct: 643 TGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAV 702
Query: 244 CVFG 255
C +G
Sbjct: 703 CAYG 706
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/87 (29%), Positives = 49/87 (56%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ L + L + I++ +G + A I QIV++ E K +++ LL E+ E A+T
Sbjct: 793 DSLTKKVLKNPIEVTVGGRSVVAKE-IEQIVEVRDEPSKFHRVLELLGELYDRDED-ART 850
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
+IFVE + KA+++ + + G+P + I
Sbjct: 851 LIFVERQEKADDLLKELMMKGYPCMSI 877
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 113 bits (272), Expect = 5e-24
Identities = 65/142 (45%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Frame = +3
Query: 96 ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HV----CVWGAP 263
A +CAH+ W+ FG G ++ + SA R + H+ C G
Sbjct: 173 ACYCAHQPSALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTS 232
Query: 264 KR---EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
E+ DL R PG D L+RCTYLVLDEADRMLDMGFEPQIR
Sbjct: 233 NPGSGERCGDLHRHARASHRLPGGRED-------QLRRCTYLVLDEADRMLDMGFEPQIR 285
Query: 435 KIIEQIRPDRQTLMWSATWPKE 500
KI++QIRPDRQTLMWSATWPKE
Sbjct: 286 KIVDQIRPDRQTLMWSATWPKE 307
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQAQG+P+A+SG+++VG+ Q
Sbjct: 111 PIQAQGFPLALSGRDMVGIAQ 131
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 113 bits (272), Expect = 5e-24
Identities = 47/86 (54%), Positives = 67/86 (77%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G PK Q +L++G +I++ATPGRL+DFLE G NL +C Y+V+DEADR+LDMGFE Q+R
Sbjct: 238 GVPKYYQINNLKKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLR 297
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI+ Q+ ++Q L +ATWP++V+ L
Sbjct: 298 KIMTQVNKNKQLLFLTATWPEQVRKL 323
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +2
Query: 494 QRSEELAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP 670
++ +LA D+ D ++I IG +L+AN NI Q V I + + KL L+E ++
Sbjct: 318 EQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYENN-- 375
Query: 671 GAKTIIFVETKRKAENISRNIRRYGWPAVCIMAIKLTR 784
K +IF +TKR +N+ + +R + + A+ I K R
Sbjct: 376 --KILIFCDTKRNCDNLGKELRYHQYNALSIHGDKQQR 411
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 112 bits (270), Expect = 8e-24
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+C++G +R Q ++ GVEI+IATPGRL D + ++ TYLVLDEADRMLDMGF
Sbjct: 429 ICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLDMGF 488
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
EPQIRK++ IRPDRQT+M SATWP V+ L
Sbjct: 489 EPQIRKLLLDIRPDRQTIMTSATWPPGVRRL 519
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSYV 234
TG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++ + +
Sbjct: 369 TGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEKEVFKYQFRD-I 426
Query: 235 RNTCVFG 255
+ C++G
Sbjct: 427 KAICLYG 433
Score = 34.3 bits (75), Expect = 3.6
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQAQ WP+ + G++L+G+ Q
Sbjct: 348 PIQAQAWPVLLKGEDLIGIAQ 368
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 112 bits (270), Expect = 8e-24
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 VCVWGAPKR-EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V V+G EQA+ L+ G EIV+ TPGRLID ++K TNLQR +YLV DEADRM DMGF
Sbjct: 358 VAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGF 417
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
E Q+R I +RPDRQTL++SAT+ K+++ L R
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLAR 450
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG +R+
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSV 358
Query: 244 CVFG 255
V+G
Sbjct: 359 AVYG 362
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 112 bits (269), Expect = 1e-23
Identities = 62/135 (45%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 117 QPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWGAPKR-EQARDLER 293
QP + ER L + ++ A C ++ L S VCV+G R EQ + + +
Sbjct: 370 QPISREERNGPGMLVLTPTRELALQVEAECSKYSYKGLKS--VCVYGGGNRKEQIQHITK 427
Query: 294 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 473
GV+I+IATPGRL D NL+ TYLVLDEAD+MLD+GFE QI KI+ +RPDRQT+
Sbjct: 428 GVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILLDVRPDRQTV 487
Query: 474 MWSATWPKEVKNLLR 518
M SATWP ++ L R
Sbjct: 488 MTSATWPHTIRQLAR 502
Score = 60.5 bits (140), Expect = 5e-08
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKTL+Y++P +H+++QP R +GP LVL PTRELA Q++ + + + +++
Sbjct: 351 TGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LKS 409
Query: 241 TCVFG 255
CV+G
Sbjct: 410 VCVYG 414
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +2
Query: 506 ELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTI 685
+LA YL + + + +G+L L A H + Q + + E EK L+QE ++ P K I
Sbjct: 499 QLARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEEEKRT----LIQEFLRNLAPEDKAI 554
Query: 686 IFVETKRKAENISRNIRRYGWP 751
IFV K A+++S ++ G P
Sbjct: 555 IFVSRKLVADDLSSDLSIQGVP 576
Score = 33.5 bits (73), Expect = 6.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGVPQ 64
PIQ+Q WPI + G +L+GV Q
Sbjct: 330 PIQSQAWPIVLQGMDLIGVAQ 350
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 112 bits (269), Expect = 1e-23
Identities = 56/108 (51%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
Frame = +3
Query: 207 CRFWTHILCS*HVCVWG-APKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 374
C+ ++ +L CV+G A EQ +L+RG +IV+ TPGR+ID L + TNL+R T
Sbjct: 602 CKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVT 661
Query: 375 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+LVLDEADRM DMGF PQI I++ IRPDRQT+M+SAT+P +V+N+ +
Sbjct: 662 FLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAK 709
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/64 (50%), Positives = 40/64 (62%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI F +R
Sbjct: 555 TGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTA 614
Query: 244 CVFG 255
CV+G
Sbjct: 615 CVYG 618
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 111 bits (268), Expect = 1e-23
Identities = 55/92 (59%), Positives = 70/92 (76%), Gaps = 4/92 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA +Q RDLERG +++ATPGRL+D +E+G L C YLVLDEADRMLDMGFEPQIR
Sbjct: 303 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362
Query: 435 KIIEQ--IRPD--RQTLMWSATWPKEVKNLLR 518
+I+EQ + P R T+M+SAT+PKE++ L R
Sbjct: 363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLAR 394
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRELAQQIQQV 204
TGSGKT A++LP + I + P RR PI+LVLAPTRELA QI +
Sbjct: 226 TGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 285
Query: 205 AADFGHTSYVRNTCVFG 255
A F + S VR V+G
Sbjct: 286 ARKFSYRSRVRPCVVYG 302
Score = 40.3 bits (90), Expect = 0.054
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA D+L +YI + +G + S + NI Q V +E +K + L LL G+ + T++
Sbjct: 392 LARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSFLLDLLNATGKD----SLTLV 446
Query: 689 FVETKRKAENISRNIRRYGWPAVCI 763
FVETK+ A+++ + G+ I
Sbjct: 447 FVETKKGADSLEDFLYHEGYACTSI 471
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 111 bits (267), Expect = 2e-23
Identities = 52/91 (57%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEP 425
G+ +Q +L+RG EIV+ TPGR+ID L + TNL+R TYLV+DEADRM DMGFEP
Sbjct: 506 GSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEP 565
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
QI +I++ IRPDRQT+++SAT+P++V+ L R
Sbjct: 566 QITRIVQNIRPDRQTVLFSATFPRQVETLAR 596
Score = 71.3 bits (167), Expect = 3e-11
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI
Sbjct: 442 TGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQI 485
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 111 bits (266), Expect = 3e-23
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 413
VCV+G APK EQ ++ G +++ATPGRL DF+E+G L R T LVLDEADRMLD+
Sbjct: 131 VCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEADRMLDL 190
Query: 414 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
GFEP+IR I R DRQT+M+SATWP+ V++L
Sbjct: 191 GFEPEIRAIAGATRADRQTVMFSATWPQSVQSL 223
Score = 75.4 bits (177), Expect = 2e-12
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G S VR
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAGEASGVRCV 131
Query: 244 CVFG 255
CV+G
Sbjct: 132 CVYG 135
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 494 QRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL-NVLLQEIGQSQEP 670
Q + LA +++ + I++ IG+ L A+ +I QIV++ + +K+ L V+ Q +G+ +E
Sbjct: 218 QSVQSLASEFMCNPIKVRIGAEGLKASQSITQIVEVVEPQDKDRHLARVMKQYLGKGKEV 277
Query: 671 GAKTIIFVETKRKAENISRNIRRYGWPAVCI 763
+T+IF K++ N+ + + R WPAVCI
Sbjct: 278 -PRTLIFGLYKKECANLHQRLSR-EWPAVCI 306
Score = 34.7 bits (76), Expect = 2.7
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGV 58
PIQAQ WPI MSG ++VG+
Sbjct: 52 PIQAQSWPIIMSGHDMVGI 70
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 111 bits (266), Expect = 3e-23
Identities = 54/94 (57%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V G P +Q R+LERGV+I++ATPGRL D LE+G +LQ +L LDEADRMLDMGFE
Sbjct: 257 VAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFE 316
Query: 423 PQIRKIIEQI-RPD---RQTLMWSATWPKEVKNL 512
PQIRKI++Q+ P RQT+++SAT+P+E++ L
Sbjct: 317 PQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRL 350
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQVAADFGHTS 228
TGSGKT A+ P I I I R G P+A++L+PTRELA QI A F + +
Sbjct: 192 TGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQT 251
Query: 229 YVRNTCVFG 255
V+ +G
Sbjct: 252 GVKVVVAYG 260
Score = 44.8 bits (101), Expect = 0.003
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLL--QEIGQSQEPGA 676
+ LA D+L +YI + +G + S+ I+Q V+ + +K + L LL Q +Q A
Sbjct: 348 QRLASDFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQA 406
Query: 677 KTIIFVETKRKAENISRNIRRYGWPAVCI 763
T++FVETK+ A+++ + G+PA I
Sbjct: 407 LTLVFVETKKGADSLENWLCINGFPATTI 435
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 110 bits (265), Expect = 3e-23
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA Q R+++ G +++ATPGRL+DF+EK +L+ C Y+VLDEADRMLDMGFEPQIR
Sbjct: 298 GADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIR 357
Query: 435 KIIEQIRP----DRQTLMWSATWPKEVKNL 512
KIIE+ +RQTLM+SAT+PKE++ L
Sbjct: 358 KIIEESNMPSGINRQTLMFSATFPKEIQKL 387
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A+++P I H+ NQ + P L+LAPTRELA QI + F +
Sbjct: 230 TGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTP 289
Query: 232 VRNTCVFG 255
+R+ V+G
Sbjct: 290 LRSCVVYG 297
Score = 40.7 bits (91), Expect = 0.041
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
++LA D+L +YI + +G + S + +I Q + + EK N L+ I + P
Sbjct: 385 QKLAADFLYNYIFMTVGRVG-STSDSIKQEIIYMTDVEKLN----YLKNIFNTTAPNTLI 439
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
+IFVETK+ A++++R + G+P I
Sbjct: 440 LIFVETKKGADSLARFLLSKGYPVSSI 466
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 110 bits (264), Expect = 4e-23
Identities = 46/86 (53%), Positives = 67/86 (77%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G PK Q +L++G +IV+ATPGRL+D LE G +L RC Y+V+DEADR+LDMGFE Q++
Sbjct: 438 GVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLLRCIYVVIDEADRLLDMGFEKQLK 497
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI+ Q+ ++Q L ++ATWP++V+ L
Sbjct: 498 KIMTQVNRNKQLLFFTATWPEQVRKL 523
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +2
Query: 530 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 709
D ++I IG +L+AN NI Q V I + + KL L + Q+ E G K +IF +TKR
Sbjct: 531 DPVKIQIGKSELTANKNIQQSVVISSSIDLKKKL---LDWLKQNYE-GNKILIFCDTKRN 586
Query: 710 AENISRNIRRYGWPAVCIMAIKLTR 784
+++ + +R + + A+ I K R
Sbjct: 587 CDSLCKELRYHQYNALAIHGDKEQR 611
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG 147
TGSGKTLA+ LPA++HI Q R G
Sbjct: 323 TGSGKTLAFALPALMHILKQREGERKSG 350
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 110 bits (264), Expect = 4e-23
Identities = 50/86 (58%), Positives = 67/86 (77%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G K Q ++L GV+I+IATPGRLI+ ++K TNLQRCTY+VLDEAD+M +GFE QIR
Sbjct: 298 GENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGFEYQIR 357
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
II QIRPD+Q L+++AT K+++ L
Sbjct: 358 SIIGQIRPDKQILLFTATMKKKIRQL 383
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+ + + +
Sbjct: 234 TGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISVS 293
Query: 244 CVFGVLLKESKPGTWR 291
+ G E+K W+
Sbjct: 294 ALLG---GENKHHQWK 306
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 109 bits (263), Expect = 6e-23
Identities = 48/85 (56%), Positives = 63/85 (74%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP+R Q L R +IV+ TPGR+IDF+E G +L+ ++LV+DEADR+++MGFE QI
Sbjct: 249 GAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQID 308
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKN 509
I IRPDRQ L WSATWPK+V +
Sbjct: 309 GIFNSIRPDRQVLYWSATWPKKVSS 333
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/64 (50%), Positives = 39/64 (60%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A + +
Sbjct: 185 TGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIA 244
Query: 244 CVFG 255
++G
Sbjct: 245 TIYG 248
Score = 42.3 bits (95), Expect = 0.013
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 494 QRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ--SQE 667
++ AE ++ I++ IGS QL+AN NI Q I +K++ L+ +G+ S +
Sbjct: 329 KKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDA--DKVDALMDTLGEIYSAD 386
Query: 668 PGAKTIIFVETKRKAENISRNIRRYG 745
A+T+IF TK+ A+ + I+ G
Sbjct: 387 EKAQTLIFTMTKKGADTLKHYIQSNG 412
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 109 bits (262), Expect = 8e-23
Identities = 54/94 (57%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V GAP +Q R+LERGV+I++ATPGRL+D +E+ +L+ YL LDEADRMLDMGFE
Sbjct: 229 VAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFE 288
Query: 423 PQIRKIIEQI-RPD---RQTLMWSATWPKEVKNL 512
PQIRKI+EQ+ P RQT+++SAT+P E++ L
Sbjct: 289 PQIRKIVEQMDMPPPGARQTMLFSATFPNEIQIL 322
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 234
TGSGKT A+ P I I R G P AL+L+PTREL+ QI + A F + + +
Sbjct: 166 TGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGL 225
Query: 235 RNTCVFG 255
+ +G
Sbjct: 226 KVVVAYG 232
Score = 34.3 bits (75), Expect = 3.6
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 521 YLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG--AKTIIFV 694
+ +YI +++G + S+ I+Q V+ ++ +K L LLQ ++ P A T++FV
Sbjct: 481 FYANYIFLSVGRVG-SSTDLIVQRVEFVEDTDKRYHLMDLLQSQMTNRTPKKYALTLVFV 539
Query: 695 ETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
ETKR + + + + G A I K+ E
Sbjct: 540 ETKRGVDALEQWLCMNGLAATAIHGDKVQMERE 572
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 109 bits (261), Expect = 1e-22
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 4/95 (4%)
Frame = +3
Query: 246 CVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 413
C +G EQ DL+RG EIV+ TPGR+ID L + TNL+R TYLVLDEADRM D
Sbjct: 410 CTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDK 469
Query: 414 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
GFEPQI K++ IRPD+QT+++SAT+P+ ++ L R
Sbjct: 470 GFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALAR 504
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 350 TGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVA 409
Query: 244 CVFG 255
C +G
Sbjct: 410 CTYG 413
Score = 39.9 bits (89), Expect = 0.072
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
E LA L ++I +G + + +I Q IC EH+K K LL+ +G E G+ +
Sbjct: 500 EALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEHQKFLK---LLELLGMYYEEGS-S 554
Query: 683 IIFVETKRKAENISRNIRRYGWPAV 757
I+FV+ + KA++I + R G+ +V
Sbjct: 555 IVFVDKQEKADDIVDQLMRTGYNSV 579
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 108 bits (260), Expect = 1e-22
Identities = 51/91 (56%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEP 425
G+ +Q +L+RG EIV+ TPGR+ID L + TNL+R T+LV+DEADRM DMGFEP
Sbjct: 639 GSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEP 698
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
QI +II+ IRP+RQT+++SAT+P++V+ L R
Sbjct: 699 QITRIIQNIRPERQTVLFSATFPRQVETLAR 729
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +R
Sbjct: 575 TGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCV 634
Query: 244 CVFG 255
V+G
Sbjct: 635 PVYG 638
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 108 bits (259), Expect = 2e-22
Identities = 48/94 (51%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 416
C G+ Q +L++G +I++ TPGR+ID L + TNLQR TYLVLDEADRM DMG
Sbjct: 424 CFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMG 483
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
FEPQ+ K+ ++RPDRQT+++SAT+P++++ L +
Sbjct: 484 FEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAK 517
Score = 78.6 bits (185), Expect = 2e-13
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F + +
Sbjct: 363 TGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSC 422
Query: 244 CVFG 255
C FG
Sbjct: 423 CCFG 426
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 107 bits (258), Expect = 2e-22
Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLD 410
VC +G A ++Q DL+RG EI++ TPGR+I+ L + TNLQR TY+VLDEADRM D
Sbjct: 659 VCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFD 718
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWET 533
MGFEPQ+ K+ IRP+RQT+++SAT P+ + L + T ++
Sbjct: 719 MGFEPQVMKVFNNIRPNRQTILFSATMPRIMDALAKKTLQS 759
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F +R
Sbjct: 600 TGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAV 659
Query: 244 CVF-GVLLKESKPGTWRG 294
C + G ++K+ RG
Sbjct: 660 CAYGGAIIKDQIADLKRG 677
Score = 49.6 bits (113), Expect = 9e-05
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA+ L ++I +G + A I QIV++ +E EK ++L LL E+ + E A+T
Sbjct: 750 DALAKKTLQSPVEIVVGGRSVVAPE-ITQIVEVREEKEKFHRLLELLGELYNTDED-ART 807
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
+IFV+ + KA+++ +++ R G+P + I
Sbjct: 808 LIFVDRQEKADDLLKDLMRKGYPCMSI 834
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 107 bits (258), Expect = 2e-22
Identities = 50/94 (53%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMG 416
C G+ Q +L+RGV +++ATPGRLID L T L+R T++VLDEADRM DMG
Sbjct: 495 CYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMG 554
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
FEPQI+KI QIRPD+QT+++SAT+P++++ L +
Sbjct: 555 FEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAK 588
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F T ++
Sbjct: 434 TGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVC 493
Query: 244 CVFG 255
C +G
Sbjct: 494 CCYG 497
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 107 bits (257), Expect = 3e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKII 443
Q DL+RG EIV TPGR+ID L G+ TNL+R TY+VLDEADRM DMGFEPQI +I+
Sbjct: 233 QIGDLKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTYMVLDEADRMFDMGFEPQITRIL 292
Query: 444 EQIRPDRQTLMWSATWPKEVKNLLR 518
+RPDRQT+M+SAT+P ++ L R
Sbjct: 293 ANLRPDRQTVMFSATFPHTMEALAR 317
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/64 (50%), Positives = 40/64 (62%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G
Sbjct: 163 TGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGFSAV 222
Query: 244 CVFG 255
V+G
Sbjct: 223 SVYG 226
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 107 bits (257), Expect = 3e-22
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQI 431
G KR+Q + L G EIV+ATPGRL+D L K +TNL+R TYL LDEADRMLDMGFE +
Sbjct: 167 GVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLALDEADRMLDMGFEKIV 226
Query: 432 RKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
R I + +RPDRQ +M+SAT P ++ L R
Sbjct: 227 RSICQAVRPDRQCVMFSATMPAAMQRLAR 255
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVR 237
TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A F S R
Sbjct: 101 TGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVSGAR 160
Query: 238 NTCVFGVLLKESK 276
+FG + K +
Sbjct: 161 CCAIFGGVSKRDQ 173
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 106 bits (255), Expect = 6e-22
Identities = 46/86 (53%), Positives = 67/86 (77%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + +QA+ ++R +I++A PGRL DFL++G +L + TYLV+DEADR+LDMGFE +R
Sbjct: 214 GQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSKVTYLVIDEADRLLDMGFEDDVR 273
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I+++ R DRQT+ +SATWPK V+NL
Sbjct: 274 FIVQRTRQDRQTVFFSATWPKAVRNL 299
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQIQQVAADF 216
TGSGKT Y+LP ++ I Q R R +GP L+LAPTREL QI Q + F
Sbjct: 146 TGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVSLF 200
Score = 34.7 bits (76), Expect = 2.7
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +2
Query: 458 RQTDFDVVSYLAQRSEELAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 634
RQT F ++ + L+ D+ D I + +G L+ N NI Q + IC + + KL
Sbjct: 283 RQTVFFSATW-PKAVRNLSLDFCAEDPIYVQVGRSNLTVNKNIDQEI-ICLYNNQ--KLQ 338
Query: 635 VLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCI 763
LL + Q + K +IF ET+ E +S ++ + G+ AV +
Sbjct: 339 TLLDILDQLKI-NDKVLIFAETRISCEQLSVDMTQEGYYAVAL 380
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 106 bits (255), Expect = 6e-22
Identities = 49/92 (53%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 VCVWGA--PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+C++G ++ Q +L R I++ATPGRL+DFL +G T L +YLV+DEADR+L++G
Sbjct: 204 LCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSYLVIDEADRLLELG 263
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
FE IR+I++QIR DRQT+ +SATWPK VK+L
Sbjct: 264 FEDTIREIVQQIRFDRQTVFFSATWPKAVKDL 295
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 228
TGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+ F
Sbjct: 140 TGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEIQLFTQNY 199
Query: 229 YVRNTCVFG 255
++ C++G
Sbjct: 200 RLKTLCIYG 208
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 106 bits (254), Expect = 7e-22
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+C +G K +Q+R L GV+IVI TPGRL D L K +L YLVLDEADRMLDMGF
Sbjct: 216 LCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADRMLDMGF 273
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQI +I+QI +RQTLM+SATWPKEVK L
Sbjct: 274 MPQIESLIDQIPKERQTLMFSATWPKEVKLL 304
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V + +R
Sbjct: 156 TGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQ 215
Query: 241 TCVFGVLLK 267
C +G L K
Sbjct: 216 LCAYGGLGK 224
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 105 bits (253), Expect = 1e-21
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 3/89 (3%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKII 443
Q +L+RG EIV TPGR+ID L G TNL+R TY+VLDEADRM DMGFEPQI +I+
Sbjct: 446 QIGELKRGAEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRIL 505
Query: 444 EQIRPDRQTLMWSATWPKEVKNLLRITWE 530
+RPDRQT+M+SAT+P ++ L R E
Sbjct: 506 ANLRPDRQTVMFSATFPHTMEALARAALE 534
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G
Sbjct: 376 TGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFNAV 435
Query: 244 CVFG 255
V+G
Sbjct: 436 SVYG 439
Score = 37.5 bits (83), Expect = 0.38
Identities = 28/91 (30%), Positives = 51/91 (56%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
E LA L + ++I IG + N +I Q+V+I E E++ +L+ +G+ E G K
Sbjct: 526 EALARAALENPVEIQIGGKSV-VNSDIDQVVEIRPE---EDRFLRVLELLGEWCERG-KI 580
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIK 775
IIFV ++ KA++ + + + G+P + + K
Sbjct: 581 IIFVASQDKADSTFKELLKSGYPCLSLHGSK 611
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 105 bits (253), Expect = 1e-21
Identities = 48/88 (54%), Positives = 64/88 (72%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
+C+ G P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE
Sbjct: 305 LCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFE 364
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVK 506
+I+ I + RQTL++SAT P++++
Sbjct: 365 DEIKSIFYFFKAQRQTLLFSATMPRKIQ 392
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Frame = +1
Query: 61 TTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 195
+TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 235 STGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 105 bits (252), Expect = 1e-21
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTYLVLDEADRMLDMGFEP 425
GA EQ L+RG EIVI TPGRLID L KG TNL+R T+LVLDEADRM DMGF P
Sbjct: 478 GAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAP 537
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
QI I+ IRPDRQT ++SAT+P ++NL +
Sbjct: 538 QISAIVGNIRPDRQTALFSATFPIMIENLAK 568
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F ++
Sbjct: 414 TGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTL 473
Query: 244 CVFG 255
++G
Sbjct: 474 AIYG 477
Score = 36.7 bits (81), Expect = 0.67
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
E LA+ L +QI +G SA+ + Q V + E E KL LL+ +G+ E G
Sbjct: 564 ENLAKKILAKPLQIVVGQRGKSASQ-VDQHVLVLNE---EKKLLKLLKLLGEWHEHG-NI 618
Query: 683 IIFVETKRKAENISRNIRRYGWPA 754
IIFV T+ ++E++ ++ YG+ A
Sbjct: 619 IIFVNTQLESEHLFNDLLAYGYDA 642
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 105 bits (252), Expect = 1e-21
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = +3
Query: 240 HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
++C+ G+ +EQ+ ++RGV +V+ATPGRL+D L+K L C YLVLDEADRM+DMGF
Sbjct: 161 NLCIGGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGF 220
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
E +R I + RQTL++SAT PK+++N +
Sbjct: 221 EEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 253
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF------ 216
TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V F
Sbjct: 93 TGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSRALEA 152
Query: 217 -GHTSYVRNTCVFGVLLKESKPGTWRG 294
G S N C+ G +KE RG
Sbjct: 153 HGFPSLRTNLCIGGSSIKEQSDAMKRG 179
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 105 bits (252), Expect = 1e-21
Identities = 54/96 (56%), Positives = 72/96 (75%), Gaps = 5/96 (5%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
CV+G AP EQ R+L RG++IVIATPGRLID L++ L +L+LDEADRMLDMGFE
Sbjct: 224 CVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFE 283
Query: 423 PQIRKIIE--QIRP--DRQTLMWSATWPKEVKNLLR 518
PQ++++I + P DRQT+++SAT+P V+NL R
Sbjct: 284 PQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLAR 319
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A++LP I + P + L PTRELA QI + F + ++ T
Sbjct: 167 TGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKTT 223
Query: 244 CVFG 255
CVFG
Sbjct: 224 CVFG 227
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 105 bits (251), Expect = 2e-21
Identities = 51/92 (55%), Positives = 69/92 (75%), Gaps = 4/92 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP Q R+++RG ++++ATPGRL D LE+G +L YLVLDEADRMLDMGFEPQIR
Sbjct: 274 GAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIR 333
Query: 435 KIIEQIR----PDRQTLMWSATWPKEVKNLLR 518
I+E+ +RQTLM+SAT+P ++++L R
Sbjct: 334 HIVEECDMPSVENRQTLMFSATFPVDIQHLAR 365
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQQIQQVAAD 213
TGSGKT ++ P + P R P ALVLAPTRELA QI + A
Sbjct: 200 TGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARK 259
Query: 214 FGHTSYVRNTCVFG 255
F + S+VR V+G
Sbjct: 260 FTYRSWVRPCVVYG 273
Score = 39.9 bits (89), Expect = 0.072
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA D+L +YI +++G + S + NI Q + + +K++ L LL S E T
Sbjct: 361 QHLARDFLDNYIFLSVGRVG-STSENITQRILYVDDMDKKSALLDLL-----SAEHKGLT 414
Query: 683 IIFVETKRKAENIS 724
+IFVETKR A+ ++
Sbjct: 415 LIFVETKRMADQLT 428
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 104 bits (250), Expect = 2e-21
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEP 425
G + Q +L+RG EIV+ATPGRLID L TNL+R T +V+DEADRM D+GFEP
Sbjct: 817 GTGIKGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLGFEP 876
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
QI KI+ RPD+QT+++SAT+PK V+NL +
Sbjct: 877 QIAKILATTRPDKQTVLFSATFPKNVENLAK 907
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 753 TGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKYEIV 812
Query: 244 CVFG 255
VFG
Sbjct: 813 AVFG 816
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 104 bits (250), Expect = 2e-21
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
+ V G +Q +L GVEI +ATPGR ID L++G T+L R +Y+VLDEADRMLDMGFE
Sbjct: 225 IVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFE 284
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
PQIR+I+ + QTL++SAT P E++ L +
Sbjct: 285 PQIREIMRSLPEKHQTLLFSATMPVEIEALAK 316
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F +
Sbjct: 164 TGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKN 223
Query: 244 CV 249
C+
Sbjct: 224 CI 225
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQEHEKENKLNVLLQEIGQSQEPGAK 679
E LA++YL + +Q+ +G + S N+ Q +V + + + L++L++E Q+++ G +
Sbjct: 312 EALAKEYLANPVQVKVGKVS-SPTTNVSQTLVKVSGSEKIDRLLDLLVEEASQAEKCGHR 370
Query: 680 ---TIIFVETKRKAENISRNIRRYGWPAVCI 763
TI+FVE K + + ++ + G AV +
Sbjct: 371 FPLTIVFVERKTRCDEVAEALVAQGLSAVSL 401
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 104 bits (249), Expect = 3e-21
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 4/96 (4%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLD 410
VC +G +P ++Q L++G I++ TPGR+ID L +L R T+LV+DEADRM D
Sbjct: 491 VCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFD 550
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
MGFEPQ+ K+ + IRPDRQT+++SAT+PK+++ L R
Sbjct: 551 MGFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLAR 586
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIR--------RGDGPIALVLAPTRELAQQIQQVAADFG 219
TGSGKTLA++LP + HI ++ + P+ +++ PTREL QI + F
Sbjct: 424 TGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFL 483
Query: 220 HTSYVRNTCVFG 255
+ C +G
Sbjct: 484 AALELTAVCAYG 495
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 103 bits (248), Expect = 4e-21
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = +3
Query: 243 VCVWGA-PKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
+C +G K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+LV DEADRM DMG
Sbjct: 370 ICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMG 429
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
FE Q++ I + +RPDRQ LM+SAT+ ++V+ L R
Sbjct: 430 FEAQVKSISDHVRPDRQCLMFSATFKQKVERLAR 463
Score = 72.9 bits (171), Expect = 8e-12
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 311 TGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPI 370
Query: 244 CVFG 255
C +G
Sbjct: 371 CAYG 374
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 103 bits (248), Expect = 4e-21
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 4/90 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G ++Q RDLERG +++ATPGRL D + +G L +LVLDEADRMLDMGFEPQIR
Sbjct: 420 GNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLDEADRMLDMGFEPQIR 479
Query: 435 KIIEQIR----PDRQTLMWSATWPKEVKNL 512
+I+E+ R +RQTLM+SAT+PK ++ L
Sbjct: 480 RIVEESRMPVTGERQTLMFSATFPKAIQEL 509
Score = 43.6 bits (98), Expect = 0.006
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI---GQSQEPG 673
+ELA D+L YI + +G + S + NI Q + +E+ K + L LL I +
Sbjct: 507 QELASDFLYRYIFLAVGRVG-STSVNITQTIFWVEENIKRSHLLDLLSNITKQNDGDDEN 565
Query: 674 AKTIIFVETKRKAENISRNIRRYGWPAVCI 763
T+IFVETK+ A+++ + + +P I
Sbjct: 566 CLTLIFVETKKAADSLEEFLYNHNFPVTSI 595
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 103 bits (248), Expect = 4e-21
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Frame = +3
Query: 270 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 449
EQ R+L+RG +++ATPGRL D + +G L+ +LVLDEADRMLDMGFEPQIR+I+EQ
Sbjct: 420 EQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQ 479
Query: 450 IR----PDRQTLMWSATWPKEVKNL 512
+ RQTLM+SAT+PK+++ L
Sbjct: 480 LNMPPTGQRQTLMFSATFPKQIQEL 504
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Frame = +1
Query: 64 TGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQQIQQVAAD 213
TGSGKT A+++P + + + PP RR P+ LVLAPTRELA QI + A
Sbjct: 341 TGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKK 400
Query: 214 FGHTSYVRNTCVFG 255
F + S +R ++G
Sbjct: 401 FAYRSRMRPAVLYG 414
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI--GQSQEPGA 676
+ELA D+L +YI + +G + S + NI Q + E +K + L LL I G +
Sbjct: 502 QELASDFLSNYIFLAVGRVG-STSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDS 560
Query: 677 KTIIFVETKRKAENISRNIRRYGWPAVCI 763
T+IFVETK+ A+++ + + P I
Sbjct: 561 LTLIFVETKKGADSLEEFLYQCNHPVTSI 589
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 103 bits (247), Expect = 5e-21
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAPKR-EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VC++G R EQ GVEIVIATPGRL D G +L TY+VLDEADRMLDMGF
Sbjct: 194 VCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGF 253
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
E IR+I+ +IRPDR + SATWP+ V+ L
Sbjct: 254 EVAIRRILFEIRPDRLVALTSATWPEGVRKL 284
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHT 225
TGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + +
Sbjct: 130 TGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYN 189
Query: 226 SYVRNTCVFG 255
Y ++ C++G
Sbjct: 190 GY-KSVCLYG 198
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 103 bits (246), Expect = 7e-21
Identities = 55/108 (50%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VC++G R+ Q +DL +G +I+IATPGRL D L+ TYLVLDEAD+MLDMGF
Sbjct: 346 VCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGF 405
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWE-TTFRSI*DHY 560
EPQI KI+ +RPDRQT+M S K V+ + + +++ FRS+ DHY
Sbjct: 406 EPQIMKILLDVRPDRQTVMTSLPVCK-VEPVEQNSFDFRAFRSVADHY 452
Score = 64.5 bits (150), Expect = 3e-09
Identities = 27/65 (41%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++ + +++
Sbjct: 287 TGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LKS 345
Query: 241 TCVFG 255
C++G
Sbjct: 346 VCIYG 350
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 102 bits (245), Expect = 9e-21
Identities = 46/91 (50%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADRMLDMG 416
C G+ ++Q DL+RGVEIV+ATPGRLID L + L +R T++V+DEADR+ DMG
Sbjct: 386 CTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADRLFDMG 445
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKN 509
FEPQI +I++ +RPD+Q +++SAT+P ++++
Sbjct: 446 FEPQITQIMKTVRPDKQCVLFSATFPNKLRS 476
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF-GHTSYVR 237
TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F +R
Sbjct: 323 TGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRSIR 382
Query: 238 NTCVFG 255
C G
Sbjct: 383 TICCTG 388
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 102 bits (244), Expect = 1e-20
Identities = 46/88 (52%), Positives = 66/88 (75%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ GAP R+Q RDL +GV+I++ATPGRL D +++ L +LVLDEAD+MLD+GF P
Sbjct: 211 IGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPA 270
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNL 512
+++II ++ DRQTL++SAT KE+K L
Sbjct: 271 VKRIISKVNKDRQTLLFSATMSKEIKKL 298
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
TG+GKT A+ LP I + P +G A++L+PTRELA QI + FG
Sbjct: 149 TGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFG 200
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 102 bits (244), Expect = 1e-20
Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = +3
Query: 267 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 446
R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 264 RDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVG 323
Query: 447 QIRPD---RQTLMWSATWPKEVKNLLR 518
Q P R T M+SAT+PKE++ L +
Sbjct: 324 QGMPPKTARTTAMFSATFPKEIQVLAK 350
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAAD 213
TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 185 TGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATK 244
Query: 214 FGHTSYVRNTCVFG 255
F + S ++ ++G
Sbjct: 245 FSYKSNIQTAILYG 258
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 102 bits (244), Expect = 1e-20
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
QAR+LE+G +V+ TPGRL+DF+ KG NL + YL+LDEADRMLDMGFEP+IRK++
Sbjct: 392 QARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTF 451
Query: 453 ----RPDRQTLMWSATWPKEVKNLLR 518
+ RQTLM+SAT+ E++ L +
Sbjct: 452 DMPEKGQRQTLMFSATFAAEIQQLAK 477
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/112 (29%), Positives = 62/112 (55%)
Frame = +2
Query: 458 RQTDFDVVSYLAQRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 637
RQT ++ A+ ++LA+++L +Y+ + +G + AN +I Q V ++EK KL
Sbjct: 459 RQTLMFSATFAAE-IQQLAKEFLSEYVFVTVGRVG-GANSDITQEVHQVTKYEKREKLVE 516
Query: 638 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
+L + G +T++F+ETKR A+ ++ + + +PA I +L R E
Sbjct: 517 ILNQAGTD-----RTLVFLETKRSADFLAAYLSQEQYPATSIHGDRLQRERE 563
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQVAADFGHT 225
TGSGKT A++LP + I I G G P A+++ PTREL QI A F +
Sbjct: 316 TGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYLEARKFASS 375
Query: 226 SYVRNTCVFG 255
+ VR V+G
Sbjct: 376 TCVRPVVVYG 385
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 102 bits (244), Expect = 1e-20
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 416
CV G+ E +++G E+VI TPGR+ID L TN++R TY+V+DEADRM DMG
Sbjct: 510 CVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMG 569
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
FEPQ+ KII +RP Q +++SAT+PK +++L R
Sbjct: 570 FEPQVMKIINNVRPSAQKVLFSATFPKTMESLAR 603
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI + F +R +
Sbjct: 449 TGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRAS 508
Query: 244 CVFG 255
C G
Sbjct: 509 CCVG 512
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 101 bits (241), Expect = 3e-20
Identities = 44/92 (47%), Positives = 63/92 (68%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
+C+ G R Q +++GV IV+ATPGRL D L K NL C YL LDEADR++D+GFE
Sbjct: 297 LCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFE 356
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
IR++ + + RQTL++SAT PK+++N +
Sbjct: 357 DDIREVFDHFKAQRQTLLFSATMPKKIQNFAK 388
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 216
TGSGKTL ++LP I+ + PI G+GP +++ P+RELA+Q V F
Sbjct: 228 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 281
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 100 bits (240), Expect = 4e-20
Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTYLVLDEADRMLDMGFEP 425
G+P EQ L+RGVEIV TPGRLI+ L G TNL+R T++V+DEADRM D+GF P
Sbjct: 498 GSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADRMFDLGFSP 557
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
QI I++ IRPDRQT ++SAT+P ++ L +
Sbjct: 558 QISAIVDNIRPDRQTALFSATFPPTIEALAK 588
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI ++ +R
Sbjct: 434 TGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTK 493
Query: 244 CVFG 255
V+G
Sbjct: 494 AVYG 497
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 100 bits (239), Expect = 5e-20
Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Frame = +3
Query: 204 CCRFWTHILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEK--GTT---NLQR 368
C +F C V GA K +Q R L G ++V+ATPGRL DFLE G T + +
Sbjct: 192 CAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPPPGFTAPVSAVK 251
Query: 369 CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
Y+VLDEADRMLDMGFEPQI+KI + RQT+M++ATWPK V+ +
Sbjct: 252 AAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKI 299
Score = 41.9 bits (94), Expect = 0.018
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRELAQQIQQV 204
TGSGKT ++LPA+ I P ++ DG P +VLAPTRELA QI
Sbjct: 132 TGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRELAIQIHDE 191
Query: 205 AADFGHTSYVRNTCVFG 255
A F + R+ ++G
Sbjct: 192 CAKFCPAAGCRSAVLYG 208
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 100 bits (239), Expect = 5e-20
Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Frame = +3
Query: 240 HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+V G+ R Q DL+RG +I++ATPGRL D +++G NL+ +L+LDEADRMLDMGF
Sbjct: 316 NVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGF 375
Query: 420 EPQIRKIIEQIR-----PDRQTLMWSATWPKEVKNLLR 518
PQIR+I+E RQT+M+SAT+P+E++ L +
Sbjct: 376 APQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAK 413
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQQIQQVAAD 213
TGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA Q + +
Sbjct: 247 TGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRK 306
Query: 214 FGHTSYVRNTCVFG 255
F + +R ++G
Sbjct: 307 FCFGTGIRTNVLYG 320
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/87 (33%), Positives = 49/87 (56%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
++LA+D+L +YI + +G + ++ +I+Q V +E K L LL E G+ T
Sbjct: 409 QQLAKDFLHNYIFLTVGRVGATSG-SIVQRVVYAEEDHKPRLLVKLLLEQGE-----GLT 462
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
++FVE KR+A+ I + +PAV I
Sbjct: 463 VVFVEMKRRADQIEDFLIDQNFPAVSI 489
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 100 bits (239), Expect = 5e-20
Identities = 45/91 (49%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADRMLDMG 416
C G+ + Q D++RGVEIVIATPGR ID L + NL +R ++V+DEADR+ D+G
Sbjct: 346 CTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLG 405
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKN 509
FEPQ+ +I++ IRPD+Q +++SAT+P ++K+
Sbjct: 406 FEPQVNQIMKCIRPDKQCVLFSATFPNKLKS 436
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF--GHTSYV 234
TGSGKT+++ILP + I Q P+ + GP+ L+L+PTRELA QI + F G S +
Sbjct: 283 TGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFTSGDPS-I 341
Query: 235 RNTCVFG 255
R+ C G
Sbjct: 342 RSLCCTG 348
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 99 bits (238), Expect = 6e-20
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G Q R ++ G ++IATPGR ID L N+++ +YLV+DEADRM D+GFEPQ
Sbjct: 208 VGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQ 267
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ +I E++R DRQTLM+SAT+P V+ + R
Sbjct: 268 VIRIAERMRKDRQTLMFSATFPHTVERIAR 297
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 192
TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q
Sbjct: 147 TGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQ 188
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 99.5 bits (237), Expect = 8e-20
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +3
Query: 246 CVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
CV+G PK EQ L++ ++V+ATPGRL+D L++G+ +L + YLVLDEADRML+ GFE
Sbjct: 215 CVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFE 273
Query: 423 PQIRKII-EQIRPDRQTLMWSATWPKEVKNL 512
I+ II E RQTLM++ATWPKEV+ L
Sbjct: 274 EDIKNIIRETDASKRQTLMFTATWPKEVREL 304
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 506 ELAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
ELA ++ + I+++IG+ QL+AN I QIV++ KE KL LL++ + K
Sbjct: 303 ELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKV 362
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
+IF K++A + RN++ G+ I
Sbjct: 363 LIFALYKKEAARVERNLKYNGYNVAAI 389
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+ +PAI H+ N R G LV++PTRELA QI ++
Sbjct: 158 TGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLTDKVGMQCC 214
Query: 244 CVFGVLLKESK 276
CV+G + K+ +
Sbjct: 215 CVYGGVPKDEQ 225
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 99.1 bits (236), Expect = 1e-19
Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Frame = +3
Query: 270 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE- 446
EQ R+L+RG +++ATPGRL D + +G L+ +LVLDEADRMLDMGFEPQIR IIE
Sbjct: 392 EQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEPQIRHIIEN 451
Query: 447 -QIRP--DRQTLMWSATWPKEVKNL 512
+ P RQTLM+SAT+PK ++ L
Sbjct: 452 RDMPPTGQRQTLMFSATFPKNIQEL 476
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 213
TGSGKT A+++P + + +N+P RR P+ LVLAPTRELA QI + A
Sbjct: 313 TGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKK 372
Query: 214 FGHTSYVRNTCVFG 255
F + S +R ++G
Sbjct: 373 FSYRSRMRPAVLYG 386
Score = 46.4 bits (105), Expect = 8e-04
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQ---EPG 673
+ELA D+L +YI + +G + S + NI Q + E+EK + L LL + + P
Sbjct: 474 QELASDFLSNYIFLAVGRVG-STSENITQTILWVNENEKRSYLLDLLSRLREGSPDYSPD 532
Query: 674 AKTIIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
+ T+IFVETK+ A+ + + + P I + R E
Sbjct: 533 SLTLIFVETKKGADALEEFLYQNKHPVTSIHGDRSQRERE 572
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VC++G K Q L+ GV+IVI TPGR+ D +E G L +++VLDEADRMLDMGF
Sbjct: 262 VCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGF 321
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
EP++R I+ Q RQT+M+SATWP V L
Sbjct: 322 EPEVRAILSQTASVRQTVMFSATWPPAVHQL 352
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 210
++F TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 211 DFGHTSYVRNTCVFG 255
+ G + + C++G
Sbjct: 189 EAGAPCGISSVCLYG 203
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 243 VCVWGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 389
VC++G K Q L+ GV+IVI TPGR+ D +E G L ++++ D
Sbjct: 199 VCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
Score = 40.3 bits (90), Expect = 0.054
Identities = 17/54 (31%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 506 ELAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQ 664
+LA++++ + I++ IGS L+ANH+++QIV++ + ++++L LL + ++Q
Sbjct: 351 QLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQ 404
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G P EQ LE+GV+++IATPGRL+D E+G L C LV+DEADRMLDMGF P
Sbjct: 107 IGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPD 166
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNL 512
I I ++ RQTL++SAT P +K L
Sbjct: 167 IETICTKLPTSRQTLLFSATMPPAIKKL 194
Score = 35.9 bits (79), Expect = 1.2
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 240
TG+GKT +++LP I + + R P +L+L PTRELA Q+ + +G + +
Sbjct: 47 TGTGKTASFVLPMIDILAHGRC--RARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMS 104
Query: 241 TCVFGVLLKESKPGTWRG 294
+ GV + E + +G
Sbjct: 105 LLIGGVPMAEQQAALEKG 122
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 97.5 bits (232), Expect = 3e-19
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Frame = +3
Query: 285 LERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 455
L+RG EIV+ TPGR+ID L TNL+R T++VLDEADRM DMGF PQI++IIE IR
Sbjct: 260 LKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEADRMFDMGFGPQIKRIIEGIR 319
Query: 456 PDRQTLMWSATWPKEVKNLLR 518
PD+Q +M+SAT+P V+ R
Sbjct: 320 PDKQIVMFSATFPISVEQHAR 340
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +R+
Sbjct: 186 TGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIRSV 245
Query: 244 CVFG 255
VFG
Sbjct: 246 AVFG 249
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 97.5 bits (232), Expect = 3e-19
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Frame = +3
Query: 267 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 446
++Q L G I+IATPGRL+D +E+G L+ C YLVLDEADRMLDMGFEPQIR+++E
Sbjct: 285 KDQIHKLRLGCHILIATPGRLLDVMEQGLIGLEGCRYLVLDEADRMLDMGFEPQIRQVVE 344
Query: 447 QIR----PDRQTLMWSATWPKEVKNL 512
R +R T M+SAT+PKE++ L
Sbjct: 345 FNRMPPKEERVTAMFSATFPKEIQLL 370
Score = 43.2 bits (97), Expect = 0.008
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTI 685
LA+D+L +Y+ + +G + S + NI+Q + +E EK + L LL G S + T+
Sbjct: 370 LAQDFLKQNYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDATGDS----SLTL 424
Query: 686 IFVETKRKAENISRNIRRYGWPAVCI 763
+FVETKR A +++ + R + V I
Sbjct: 425 VFVETKRGASDLAYYLNRQNYQVVTI 450
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 97.5 bits (232), Expect = 3e-19
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q +D+ +G +++ATPGRL D LE+ L YLVLDEADRMLDMGFEPQIR
Sbjct: 328 GRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIR 387
Query: 435 KIIEQIR----PDRQTLMWSATWPKEVKNL 512
KI+EQ RQTLM+SAT+P+E++ L
Sbjct: 388 KIVEQTNMPPPGQRQTLMFSATFPREIQML 417
Score = 50.0 bits (114), Expect = 7e-05
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQQVAADFGH 222
TGSGKT A+++P + + P + + P+AL+LAPTRELA QI A F +
Sbjct: 257 TGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFSY 316
Query: 223 TSYVRNTCVFG 255
S VR V+G
Sbjct: 317 RSLVRPCVVYG 327
Score = 39.9 bits (89), Expect = 0.072
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA D+L DY+ + +G + S + NI Q + E+EK + L +L +I + + ++
Sbjct: 417 LASDFLKDYLFLRVGKVG-STSQNITQRIVYVDENEKRDHLLDILTDI----DSDSLILV 471
Query: 689 FVETKRKAE 715
FVETKR A+
Sbjct: 472 FVETKRGAD 480
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/88 (51%), Positives = 58/88 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P E + RGV IV+ATPGRL+D L+K L C YL +DEADRM+DMGFE +R
Sbjct: 296 GLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVR 355
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I + RQTL++SAT PK+++N R
Sbjct: 356 TIFSFFKGQRQTLLFSATMPKKIQNFAR 383
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQV 204
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q ++
Sbjct: 223 TGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEI 272
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V V G +R Q RD+ G IV+ATPGRL DF+ +G NL L+LDE+DRMLDMGF
Sbjct: 105 VAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFL 164
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLL 515
P I++II + +RQTL++SAT VK L+
Sbjct: 165 PTIKRIIAAMPAERQTLLFSATLESSVKQLV 195
Score = 50.4 bits (115), Expect = 5e-05
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKTLA++LP I ++ +P R G AL+L PTRELA QI + + +R
Sbjct: 48 TGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQINEALLQIARGTGIRAA 104
Query: 244 CVFGVLLKESKPGTWRG 294
G L + S+ RG
Sbjct: 105 VAVGGLNERSQLRDIRG 121
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V G Q RDL+RG I+IATPGRL+DF+ +G L +++LDEADRMLDMGFE
Sbjct: 423 VAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFE 482
Query: 423 PQIRKIIEQ----IRPDRQTLMWSATWPKEVKNL 512
+IRK+ + DR TLM+SAT+P E++ L
Sbjct: 483 TEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRL 516
Score = 40.3 bits (90), Expect = 0.054
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A++LP + I N P A+V+ PTREL QI A F +
Sbjct: 359 TGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTV 418
Query: 232 VRNTCVFG 255
VR +G
Sbjct: 419 VRPVVAYG 426
Score = 39.9 bits (89), Expect = 0.072
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +2
Query: 503 EELAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAK 679
+ LA D+L D++ + +G + + I+ + Q+ +K KL L+ ++ +++ ++
Sbjct: 514 QRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQD-DKRAKLLELISDVAETR---SR 569
Query: 680 TIIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
T++FVETKR A+ ++ + + G P I +L + E
Sbjct: 570 TLVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQERE 607
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 97.1 bits (231), Expect = 4e-19
Identities = 43/91 (47%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADRMLDMG 416
C G+ ++Q DL+RG EIV+ATPGR ID L L +R T++V+DEADR+ D+G
Sbjct: 365 CTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLG 424
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKN 509
FEPQI +I++ +RPD+Q +++SAT+P ++++
Sbjct: 425 FEPQITQIMKTVRPDKQCVLFSATFPNKLRS 455
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHT-SYVR 237
TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F + +R
Sbjct: 302 TGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIR 361
Query: 238 NTCVFG 255
+ C G
Sbjct: 362 SVCCTG 367
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1
Query: 58 TTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 237
T TGSGKTL+Y+LPA++ I+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++
Sbjct: 42 TKTGSGKTLSYLLPALMPIDEQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAIKIK 101
Query: 238 NTCVFG 255
N C+FG
Sbjct: 102 NICLFG 107
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 96.3 bits (229), Expect = 8e-19
Identities = 47/97 (48%), Positives = 63/97 (64%)
Frame = +3
Query: 222 HILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 401
HI S + + G P Q R L +GVE+++ATPGRL+D ++ L +LVLDEADR
Sbjct: 115 HIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADR 174
Query: 402 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
MLDMGF IRKI+ ++ RQTL +SAT PK++ L
Sbjct: 175 MLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIAEL 211
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 95.9 bits (228), Expect = 1e-18
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
+ + G P E + RGV I++ATPGRL+D L+K L C YL +DEADRM+DMGFE
Sbjct: 294 LAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFE 353
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+R I RQTL++SAT PK+++N R
Sbjct: 354 EDVRTIFSFFEGQRQTLLFSATMPKKIQNFAR 385
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQV 204
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q +
Sbjct: 225 TGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDI 274
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 95.9 bits (228), Expect = 1e-18
Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 5/95 (5%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VCV+G + Q +++ +G +I++ATPGRL+ F EK +L YL+ DEADRMLDMGF
Sbjct: 244 VCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGF 303
Query: 420 EPQIRKIIE--QIRP--DRQTLMWSATWPKEVKNL 512
EPQIR+I E ++ P RQTLM+SAT+PK+++ L
Sbjct: 304 EPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRL 338
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQIQQVAADFG 219
TGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI + A F
Sbjct: 177 TGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFT 236
Query: 220 HTSYVRNTCVFG 255
+ +R+ CV+G
Sbjct: 237 EDTPIRSVCVYG 248
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA D+L DY+ I +G A + I I E+E K +L +G+ G KT
Sbjct: 336 QRLAADFLDDYVFITVGR----AGSTVESIQQIILWVEEEIKQEAILDVLGEFAGKGQKT 391
Query: 683 IIFVETKRKAENISRNIRRYGW 748
+IFVETKR A+ + + +G+
Sbjct: 392 VIFVETKRGADILENYLYDHGY 413
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 95.9 bits (228), Expect = 1e-18
Identities = 43/92 (46%), Positives = 61/92 (66%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
+C+ G R Q ++RGV IV+ATPGRL D L K +L C YL LDEADR++D+GFE
Sbjct: 261 LCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFE 320
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
IR++ + + RQTL++SAT P +++ R
Sbjct: 321 DDIREVFDHFKSQRQTLLFSATMPTKIQIFAR 352
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 216
TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q +V F
Sbjct: 192 TGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQF 245
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 95.9 bits (228), Expect = 1e-18
Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 5/96 (5%)
Frame = +3
Query: 246 CVWGA-PKREQARDLERG-VEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLD 410
C +G P +Q ++RG + I+ AT GRLID L+ + + +R TY+VLDEADRM D
Sbjct: 615 CAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFD 674
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
MGFEPQ+ KI+ IRPDRQT+++SAT+PK + L R
Sbjct: 675 MGFEPQVMKILASIRPDRQTILFSATFPKTMAALAR 710
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA+ +P I H+ +Q P++ DGPI L+LAPTREL+ QI F + S +
Sbjct: 555 TGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIK 614
Query: 244 CVFG 255
C +G
Sbjct: 615 CAYG 618
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G Q +L RGVEI+IATPGRL+D +++ T NL + LVLDEADRMLDMGF P ++
Sbjct: 124 GVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQ 183
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+I+ + +RQTL++SAT+ E+K L
Sbjct: 184 RILNLLPKERQTLLFSATFSPEIKKL 209
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELAQQIQQVAADFGHTSYV 234
TG+GKT ++ LP I + Q P+ AL+L PTRELA Q+ + + +
Sbjct: 57 TGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPL 116
Query: 235 RNTCVFG 255
R+ VFG
Sbjct: 117 RSAVVFG 123
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/81 (54%), Positives = 58/81 (71%)
Frame = +3
Query: 270 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 449
+Q DL+RGV++V ATPGRL+D +E+GT L LVLDE DRMLDMGF P +++I++Q
Sbjct: 243 KQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQ 302
Query: 450 IRPDRQTLMWSATWPKEVKNL 512
RQTL +SAT P E+ L
Sbjct: 303 CPQARQTLFFSATLPPELAQL 323
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ LP + + R LVL PTRELA Q+++ + + + T
Sbjct: 179 TGTGKTAAFALPILHKLGAHERRLR-----CLVLEPTRELALQVEEAFQKYSKYTDLTAT 233
Query: 244 CVFG 255
V+G
Sbjct: 234 VVYG 237
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA R Q +L RG ++++ATPGRL+D +G +L+LDEADRMLDMGFEPQIR
Sbjct: 273 GADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFEPQIR 332
Query: 435 KIIEQIRPD------RQTLMWSATWPKEVKNLLR 518
I++ D RQTL++SAT+P E++ L R
Sbjct: 333 MIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAR 366
Score = 56.8 bits (131), Expect = 6e-07
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 TGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHT 225
TGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI A F +
Sbjct: 203 TGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYH 262
Query: 226 SYVRNTCVFG 255
+ VR V+G
Sbjct: 263 TPVRCVVVYG 272
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/88 (48%), Positives = 63/88 (71%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G +Q +DLE+GV+IV+ TPGR+ID L + T +L YLVLDEADRMLDMGF +
Sbjct: 125 GQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVL 184
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+II++ +++T ++SAT PKE+ ++ R
Sbjct: 185 EIIKRTGENKRTFLFSATMPKEIVDIAR 212
Score = 35.5 bits (78), Expect = 1.5
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ + TG+GKT A+ +P + I+ + A+++ PTRELA QI +
Sbjct: 57 KDLIAQAQTGTGKTAAFGIPLLERID----FKANKFVKAIIVTPTRELALQIFEELKSLK 112
Query: 220 HTSYVRNTCVFG 255
T V+ T ++G
Sbjct: 113 GTKRVKITTLYG 124
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 93.5 bits (222), Expect = 6e-18
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+ ++G E Q R L R EI++ TPGRL+D + +GT +L Y+VLDEAD MLDMGF
Sbjct: 103 LAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGF 162
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
P I+KI+ Q +RQT ++SAT P EV+ L
Sbjct: 163 LPDIQKILSQCPRERQTFLFSATLPDEVREL 193
Score = 37.5 bits (83), Expect = 0.38
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT ++ +P + N+ + +G+G ALVL PTRELA Q+ + + ++
Sbjct: 50 TGTGKTASFGIPIL----NR--VIKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVL 103
Query: 244 CVFG 255
++G
Sbjct: 104 AIYG 107
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 93.1 bits (221), Expect = 7e-18
Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G R Q D RG +IATPGRL D ++G +L+ C LV+DEADRMLDMGFEPQ
Sbjct: 212 IGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKYCNKLVIDEADRMLDMGFEPQ 271
Query: 429 IRKIIEQIR--PDRQTLMWSATWPKEVKNLLRITWETTFRSI 548
IR+II + R T M+SAT+PK V +L + F I
Sbjct: 272 IREIINNLPSVSKRHTSMFSATFPKSVMSLASKLMKPNFGEI 313
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQIQQVAAD 213
TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL QI VA
Sbjct: 140 TGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQITSVAKT 199
Query: 214 FGHTSYVRNTCVFG 255
+++R+ V G
Sbjct: 200 LLKLTHLRSVSVIG 213
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 93.1 bits (221), Expect = 7e-18
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ---RCTYLVLDEADRMLDMG 416
C G+ ++Q L+ GVEI IATPGR ID L NL R +++V+DEADR+ D G
Sbjct: 360 CTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRISFVVMDEADRLFDFG 419
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKN 509
FEPQI ++ +RPDRQ +++SAT+P +V N
Sbjct: 420 FEPQIASVLRTVRPDRQCVLFSATFPSKVSN 450
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 201
TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI +
Sbjct: 298 TGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINE 344
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
H V+G R Q + L RGV+I++ATPGRL+D +E+ +L+ +L+LDEADRMLDMG
Sbjct: 108 HCVVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMG 167
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
F + KI+ + DRQ++M+SAT PK +++L
Sbjct: 168 FVRDVMKIVGKCPDDRQSMMFSATMPKPIEDL 199
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 234
TG+GKT A+ LP + H + +P R AL+L+PTRELA QI + AD + +
Sbjct: 50 TGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIADLSEGTPI 106
Query: 235 RNTCVFG 255
+ VFG
Sbjct: 107 SHCVVFG 113
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 92.7 bits (220), Expect = 1e-17
Identities = 47/92 (51%), Positives = 61/92 (66%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V + G +QA L + EIVIATPGRL+D LE+G L LVLDEADRMLDMGF+
Sbjct: 104 VIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFK 163
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
PQ+ +I+ ++ RQTL++SAT EV + R
Sbjct: 164 PQLDRILRRLPKQRQTLLFSATMAGEVADFAR 195
Score = 53.2 bits (122), Expect = 7e-06
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ TG+GKT A++LP I + +P R ALVLAPTRELA QI + FG
Sbjct: 42 KDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERFG 95
Query: 220 HTSYVRNTCVFG 255
H VR + G
Sbjct: 96 HARRVRGAVIIG 107
Score = 34.3 bits (75), Expect = 3.6
Identities = 25/86 (29%), Positives = 42/86 (48%)
Frame = +2
Query: 488 LAQRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQE 667
+A + A +L D +++ + +A Q+ + +HEK L LL+ G S
Sbjct: 186 MAGEVADFARAHLRDPVRVEVARSGTTAARAEQQVF-LADQHEKLPLLLTLLERDGDS-- 242
Query: 668 PGAKTIIFVETKRKAENISRNIRRYG 745
T+IF TKR+A+ I ++I R G
Sbjct: 243 ----TLIFTRTKRRADKIWKHIGRAG 264
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/85 (51%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +3
Query: 270 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 449
+QA L +GVEI+IATPGR+ D LEK T L +C+Y++LDEADRM+D+GF+ + I++Q
Sbjct: 264 QQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMIDLGFQDSLNFILDQ 323
Query: 450 IRPD--RQTLMWSATWPKEVKNLLR 518
I P+ R T M+SAT KE++N+ +
Sbjct: 324 IPPEIQRTTHMFSATMQKELENIAK 348
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVA 207
TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A
Sbjct: 188 TGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEA 238
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VCV+G Q LE G +I+IATPGRL+D L G N+ + LVLDEADRMLDMGF
Sbjct: 109 VCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGF 168
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
P +++I+ ++ D+Q +++SAT+ K +K +
Sbjct: 169 WPDLQRILRRLPNDKQIMLFSATFEKRIKTI 199
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ + + +R
Sbjct: 53 TGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIV 109
Query: 244 CVFG 255
CV+G
Sbjct: 110 CVYG 113
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/90 (46%), Positives = 60/90 (66%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G +Q + L+RGV+++IATPGRL+D E+G + +LV+DEADRMLDMGF P
Sbjct: 108 IGGVSFGDQEKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPD 167
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I +I + P +QTL +SAT P E+ L +
Sbjct: 168 IERIFKMTPPKKQTLFFSATMPPEITRLTK 197
Score = 39.9 bits (89), Expect = 0.072
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TG+GKT A+ LP I + N R P ALV+APTRELA Q+
Sbjct: 48 TGTGKTAAFTLPLIDKLMNGRAKARM--PRALVIAPTRELADQV 89
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/96 (51%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V G Q L G I++ATPGRL+DF+EKG +LVLDEADRMLDMGF
Sbjct: 306 VAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFL 365
Query: 423 PQIRKII--EQIRP--DRQTLMWSATWPKEVKNLLR 518
P I K++ E + P +RQTLM+SAT+P EV++L R
Sbjct: 366 PSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLAR 401
Score = 34.7 bits (76), Expect = 2.7
Identities = 23/97 (23%), Positives = 50/97 (51%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA +L +Y+ + +G + + + ++ + ++K++ L +L+ S G T
Sbjct: 397 QHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVAR-NKKKDLLKEILERENDSGTLGG-T 454
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
++FVE K+KA+ I+ + +P I +L R+ E
Sbjct: 455 LVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQRE 491
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 443
Q L++GVEI++ TPGR+ID L TNL R +++VLDEADR+LD+GFE QI I+
Sbjct: 685 QLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSIL 744
Query: 444 EQIRPDRQTLMWSATWPKEVKNLLR 518
R D+QT M SAT+P ++NL +
Sbjct: 745 NNCRKDKQTAMISATFPNYIQNLAK 769
Score = 60.5 bits (140), Expect = 5e-08
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+ + ++
Sbjct: 615 TGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYCKAVDLKIL 674
Query: 244 CVFG 255
V+G
Sbjct: 675 AVYG 678
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q+ ++ G I++ TPGRLIDF+ +G N C +LVLDEADRMLDMGF +++
Sbjct: 418 GVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLDEADRMLDMGFMGEVK 477
Query: 435 KIIEQ----IRPDRQTLMWSATWPKEVKNL 512
K++ ++ +R TLM+SAT+P EV+ L
Sbjct: 478 KVVYHGTMPVKVERNTLMFSATFPNEVQEL 507
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT AY++P I + + P A+V+ PTRELA QI + A F + +
Sbjct: 350 TGSGKTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDTI 409
Query: 232 VRNTCVFG 255
++ V+G
Sbjct: 410 IKPVVVYG 417
Score = 36.3 bits (80), Expect = 0.89
Identities = 19/87 (21%), Positives = 52/87 (59%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ELA ++L +YI + +G++ + + ++++I + +++++ LL+ + +++ G KT
Sbjct: 505 QELAAEFLENYIFVTVGTVGGACMDVLQEVIEI----DAKSRIDRLLEIL--TEKEGVKT 558
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
++F +K+ A+ ++ + PA I
Sbjct: 559 LVFASSKKTADFLAALLSTKNLPATSI 585
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP+ QAR L G ++++A PGRL DFL+ G ++LV DEADR+LDMGF+ Q+
Sbjct: 223 GAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFDEVSFLVFDEADRLLDMGFKVQLD 282
Query: 435 KIIEQIRPDR--QTLMWSATWPKEVKNL 512
I+ R QT+MWSATWP V+ L
Sbjct: 283 DILGYFSSHRPAQTMMWSATWPPVVEQL 310
Score = 39.9 bits (89), Expect = 0.072
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 204
TGSGKT+A+ +PA+ P P +VLAPTREL QQ +V
Sbjct: 164 TGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTRELVQQTAKV 206
Score = 36.3 bits (80), Expect = 0.89
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 503 EELAEDYLGD---YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 673
E+LA++YL I+ L N NI Q + E+ K V L + G+ E
Sbjct: 308 EQLAQEYLSQNRYVIRSGTAGTGLQVNENIKQHIFFADAPEERVKTLVSLIKEGKIDENT 367
Query: 674 AKTIIFVETKRKAENISRNIRR 739
AK +IFVE + EN + + R
Sbjct: 368 AKMMIFVERQTDTENAAYALAR 389
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/83 (49%), Positives = 61/83 (73%)
Frame = +3
Query: 264 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 443
K +Q L +G +++I TPGRL++FL+ T N Q CTY+V+DEADR+ + GF Q+R I+
Sbjct: 226 KHKQQSSLMKGADVIIGTPGRLMNFLK--TVNWQFCTYVVVDEADRIFETGFLRQLRSIM 283
Query: 444 EQIRPDRQTLMWSATWPKEVKNL 512
+ IRPDRQTL++ AT P +++ L
Sbjct: 284 DYIRPDRQTLLFGATLPPQIEEL 306
Score = 41.5 bits (93), Expect = 0.024
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 192
TG+GKTL +++P + H+ Q + +GP AL+L+PT LA+Q
Sbjct: 162 TGTGKTLCFLIPLLYHVLAQ---GKQEGPTALILSPTELLARQ 201
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +3
Query: 303 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 482
++I+TPGRL+DF++ G L T +VLDEADRMLDMGFE QI +I+ +R DRQTL +S
Sbjct: 559 VIISTPGRLLDFMKDGLP-LNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFS 617
Query: 483 ATWPKEVKNL 512
ATWP EV+ L
Sbjct: 618 ATWPNEVQRL 627
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/68 (52%), Positives = 42/68 (61%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ + + R
Sbjct: 478 TGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQS-----QYELFTRTC 529
Query: 244 CVFGVLLK 267
CV+G + K
Sbjct: 530 CVYGGVFK 537
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 90.6 bits (215), Expect = 4e-17
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q L+ GVEI++ATPGRL+D +E+ N + LVLDEADRMLDMGF P I++++ +
Sbjct: 124 QIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALL 183
Query: 453 RPDRQTLMWSATWPKEVKNL 512
P RQ+LM+SAT+ E++ L
Sbjct: 184 SPQRQSLMFSATFSGEIRKL 203
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 234
TG+GKT + LP + + + P+ AL++APTRELA QI + +G +
Sbjct: 51 TGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLAL 110
Query: 235 RNTCVFG 255
R VFG
Sbjct: 111 RTAVVFG 117
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 90.6 bits (215), Expect = 4e-17
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +3
Query: 255 GAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 431
GA +Q L+RG +IV+ATPGRLIDF K N C LV+DEADRMLDMGF P +
Sbjct: 205 GAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDV 264
Query: 432 RKIIEQI--RPDRQTLMWSATWPKEVKNL 512
R+I+ + + DRQTLM+SAT +V NL
Sbjct: 265 RRIVSWMPKKRDRQTLMFSATISSDVNNL 293
Score = 39.5 bits (88), Expect = 0.095
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 216
K+ + TG+GKT +++ + + G P AL+LAPTREL QI + A
Sbjct: 132 KDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKL 191
Query: 217 GHTSYVRNTCVFG 255
G + V V+G
Sbjct: 192 GRYTGVNADAVYG 204
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 90.6 bits (215), Expect = 4e-17
Identities = 41/86 (47%), Positives = 57/86 (66%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P R Q LE G +++ TPGR++D LE+ +L T LVLDEADRML+MGF+ +
Sbjct: 127 GEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLN 186
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I++ I RQTL++SAT+PK + L
Sbjct: 187 AIVKHIPKTRQTLLFSATYPKNIAAL 212
Score = 37.1 bits (82), Expect = 0.51
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
R TGSGKT A+ L + + + P ALVL PTRELA Q+
Sbjct: 64 RADTGSGKTTAFALTLLAKLE-----AKSFSPQALVLCPTRELAHQV 105
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 90.6 bits (215), Expect = 4e-17
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKII 443
Q L+RGVEI++ TPGR+ID L TNL R +++VLDEADR+LD+GFE QI I+
Sbjct: 785 QLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIHNIL 844
Query: 444 EQIRPDRQTLMWSATWPKEVKNLLR 518
R D+QT M SAT+P ++NL +
Sbjct: 845 NNCRKDKQTAMISATFPNYIQNLAK 869
Score = 72.9 bits (171), Expect = 8e-12
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A + +R
Sbjct: 715 TGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYCQAVNLRIL 774
Query: 244 CVFG 255
V+G
Sbjct: 775 AVYG 778
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 90.2 bits (214), Expect = 5e-17
Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
Frame = +3
Query: 240 HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
H+ G Q + + +GV+I++ATPGRL+D + KG ++VLDEADRMLDMGF
Sbjct: 413 HIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDEADRMLDMGF 472
Query: 420 EPQIRKII--EQIRP--DRQTLMWSATWPKEVKNL 512
P + K++ + ++P +RQTLM+SAT+P+E++ L
Sbjct: 473 LPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQL 507
Score = 36.3 bits (80), Expect = 0.89
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVH--------INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
TGSGKT A+++P I+H +++ + + P AL+++PTREL QI A F
Sbjct: 348 TGSGKTAAFLIP-IIHTLLAKDRDLSDMSSANQVE-PRALIISPTRELTIQIFDEARKFS 405
Query: 220 HTSYVRNTCVFG 255
S ++ ++G
Sbjct: 406 KDSVLKCHIIYG 417
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 90.2 bits (214), Expect = 5e-17
Identities = 56/117 (47%), Positives = 67/117 (57%), Gaps = 27/117 (23%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV------------ 383
VCV+G R+ Q +ERGV+IVIATPGRL D NL+ TYLV
Sbjct: 180 VCVYGGGDRKAQIHKVERGVDIVIATPGRLHDLQMNKLINLRSITYLVSCLHVFVFKMWD 239
Query: 384 --------------LDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
LDEADRMLD+GFEPQI KI+ +RPDRQT+M SATWP V+ +
Sbjct: 240 SRLRSVRLFLCNKVLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSATWPASVRRM 296
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+ + + Y ++
Sbjct: 121 TGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-KS 179
Query: 241 TCVFG 255
CV+G
Sbjct: 180 VCVYG 184
Score = 43.6 bits (98), Expect = 0.006
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQEHEKENKLNVLLQEIGQSQEPGAKTI 685
+A YL D + + +GSL L+A ++ Q I+ + E +K LN L ++ EP K +
Sbjct: 296 MATSYLKDPMMVYVGSLDLTAVSSVQQKILIVSAEEKKPYLLNFL-----KNMEPQDKVL 350
Query: 686 IFVETKRKAENISRNIRRYGWPAVCI 763
IFV K A+++S ++ YG C+
Sbjct: 351 IFVGRKLTADDLSSDLCLYGESVQCL 376
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 90.2 bits (214), Expect = 5e-17
Identities = 42/86 (48%), Positives = 57/86 (66%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP +Q R L++GV++V+ATPGR I F+E G L YLVLDEAD ML+MGF +
Sbjct: 108 GAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVE 167
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
K+++ DR LM+SAT P +K +
Sbjct: 168 KVLKASPDDRTVLMFSATMPPRLKKI 193
Score = 39.5 bits (88), Expect = 0.095
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ LP + I +P +++ P AL+L PTRELA Q+ + F +
Sbjct: 49 TGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEIKSFCKGRGITTV 103
Query: 244 CVFG 255
++G
Sbjct: 104 TLYG 107
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 89.8 bits (213), Expect = 7e-17
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P R Q + + G IV+ TPGR++ L K + +L LVLDEADRMLDMGF+ +I
Sbjct: 110 GMPFRPQMKSVAHGAHIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEID 169
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
II+Q RQTL++SAT+PK++ + +
Sbjct: 170 AIIDQTNKQRQTLLFSATYPKKIATIAK 197
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 89.8 bits (213), Expect = 7e-17
Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Frame = +3
Query: 249 VWGAPKREQARDLE-RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
V G +Q + LE R +I++ATPGRL+DF ++G +L +VLDEADRMLDMGF P
Sbjct: 119 VGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIP 178
Query: 426 QIRKIIEQIRP--DRQTLMWSATWPKEVKNLLRITWET 533
Q+R+II Q P +RQTL++SAT+ +V NL + W T
Sbjct: 179 QVRQIIRQTPPKSERQTLLFSATFTDDVMNLAK-QWTT 215
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIR-RGDG-PIALVLAPTRELAQQIQQVAA 210
R TG+GKT A+++ I + PP + R G P AL++APTREL QI + AA
Sbjct: 52 RAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAA 105
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 89.8 bits (213), Expect = 7e-17
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Frame = +3
Query: 243 VCVWGAPKREQARDL---ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 413
VC++G + + R+L GV+I+ ATPGRL DFL +G+ +L ++ VLDEADRMLD
Sbjct: 289 VCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVSFAVLDEADRMLDR 348
Query: 414 GFEPQIRKIIEQIRP--DRQTLMWSATWPKEVKNL 512
GF I+ I+ P RQTLM++ATWP +++ L
Sbjct: 349 GFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKL 383
Score = 43.2 bits (97), Expect = 0.008
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQVAADFGHTS 228
TGSGKT+A+ LP + + ++P + R P A++++PTRELA Q +
Sbjct: 225 TGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAALSGLASLV 284
Query: 229 YVRNTCVFG 255
+ C+FG
Sbjct: 285 GLSAVCIFG 293
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 89.8 bits (213), Expect = 7e-17
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 5/95 (5%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDL-ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
VC++G ++ QAR+L ++ +V+ TPGR +D + G +L +YLVLDEADRMLD G
Sbjct: 286 VCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELDLSSVSYLVLDEADRMLDAG 345
Query: 417 FEPQIRKIIEQI---RPDRQTLMWSATWPKEVKNL 512
FE IR+II + RQT+M+SATWP+ V+ L
Sbjct: 346 FENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRL 380
Score = 56.4 bits (130), Expect = 8e-07
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRELAQQIQQVAADFG 219
TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ + + FG
Sbjct: 219 TGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSAFG 278
Query: 220 HTSYVRNTCVFGVLLKESK 276
+++ C+FG + K+ +
Sbjct: 279 EQVGLKSVCIFGGVGKDGQ 297
Score = 39.1 bits (87), Expect = 0.13
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKE----NKLNVLLQEIGQSQEPG 673
LA +L + ++I +GS +LSAN I QIV++ +K+ + L L+ S+
Sbjct: 380 LASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDFRLTHHLKAHLKVHPNSKTSP 439
Query: 674 AKTIIFVETKRKAENISRNIRRYGW 748
+ ++F K++A+ + IRR G+
Sbjct: 440 TRILVFALYKKEAQRLEYTIRRAGY 464
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 89.4 bits (212), Expect = 9e-17
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V V+G R Q L +GV+I+IATPGRL+D L T+L + LVLDEADRMLDMGF
Sbjct: 109 VTVYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGF 168
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
P I++I++++ +RQTL++SAT+ VK L
Sbjct: 169 LPDIQRIMKRMPEERQTLLFSATFETRVKAL 199
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKT AY LP I ++ Q P AL+LAPTRELAQQ+ + + +
Sbjct: 49 TGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAI 108
Query: 241 TCVFG 255
V+G
Sbjct: 109 VTVYG 113
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 89.4 bits (212), Expect = 9e-17
Identities = 40/87 (45%), Positives = 62/87 (71%)
Frame = +3
Query: 258 APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 437
+P Q +L++ IV+ TPGR++D +EKGT +L+R YLV+DEAD ML+MGF Q+
Sbjct: 110 SPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEA 169
Query: 438 IIEQIRPDRQTLMWSATWPKEVKNLLR 518
II+++ R T+++SAT P++V+ L R
Sbjct: 170 IIDELPTKRMTMLFSATLPEDVERLSR 196
Score = 40.3 bits (90), Expect = 0.054
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ ++ TGSGKT ++ +P + + + P ALVL PTRELA Q+++ + G
Sbjct: 42 KDLVVKSQTGSGKTASFGIPLCEMVEWEE-----NKPQALVLTPTRELAVQVKEDITNIG 96
Query: 220 HTSYVRNTCVFG 255
++ ++G
Sbjct: 97 RFKRIKAAAIYG 108
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 89.4 bits (212), Expect = 9e-17
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q + L+RG +I++ATPGRL+D L + +L++ YLVLDEADRMLD+GF I+
Sbjct: 113 GVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQ 172
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI++ DRQTL+++AT + V+ L
Sbjct: 173 KIMDYAADDRQTLLFTATADESVEVL 198
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G +R
Sbjct: 50 TGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRV 107
Query: 241 TCVFG 255
V+G
Sbjct: 108 ISVYG 112
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 89.4 bits (212), Expect = 9e-17
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Frame = +3
Query: 225 ILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 404
I C + G P Q L G ++V+ATPGRL+D ++G L + TYLV+DEADRM
Sbjct: 140 IRCPGNPVCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEADRM 199
Query: 405 LDMGFEPQIRKII---EQIRPDRQTLMWSATWPKEVKNLLR 518
L MG E Q+RKI+ RQTL+WSAT P+ ++ L R
Sbjct: 200 LGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLAR 240
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 86 TGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 129
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 89.4 bits (212), Expect = 9e-17
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+CV+G + K Q + GV+IVI TPGRL D +E L +++VLDEADRMLDMGF
Sbjct: 223 ICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGF 282
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
E +R I+ RQ +M+SATWP +V L
Sbjct: 283 EEPVRFILSNTNKVRQMVMFSATWPLDVHKL 313
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/87 (32%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +2
Query: 506 ELAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+LA++++ + I++ IGS+ L+ANH+++QI+++ E ++ +L LL++ +SQ+ +
Sbjct: 312 KLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQK--NRV 369
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCI 763
++F K +AE + R +++ GW AV I
Sbjct: 370 LVFALYKVEAERLERFLQQRGWKAVSI 396
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V + G
Sbjct: 160 TGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCG 219
Query: 232 VRNTCVFG 255
+++ CV+G
Sbjct: 220 LKSICVYG 227
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/87 (47%), Positives = 61/87 (70%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP +Q + L+R +V+ATPGRLID L +G +L YLVLDEAD M++MGF+ +I
Sbjct: 7 GAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKAEID 66
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLL 515
+I++ +P L+++AT PK+VK L+
Sbjct: 67 EILKSCKPAITKLLFTATMPKDVKLLI 93
>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
Actinomycetales|Rep: Possible ATP-dependent RNA helicase
- Rhodococcus sp. (strain RHA1)
Length = 632
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/90 (48%), Positives = 60/90 (66%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G P +Q L RGV+I++ATPGRL D L +GT L LDEAD+M DMGF P+
Sbjct: 134 VGGTPFSKQVDQLRRGVDILVATPGRLNDHLRQGTCILDSIEITALDEADQMADMGFLPE 193
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+R I+ + R D Q L++SAT +EV++L+R
Sbjct: 194 VRAILGETRADGQRLLFSATLDREVQSLVR 223
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
R TGSGKTLA+ LP + ++ P ALVL PTRELA Q+
Sbjct: 69 RAQTGSGKTLAFGLPMLTRLSRHEDRPAPKRPRALVLVPTRELAFQV 115
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P R QA L +G I+I TPGR+ D L KGT L+ LVLDEADRMLDMGF +I
Sbjct: 109 GVPLRAQADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEII 168
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
KI + +QTL++SAT+P ++++L +
Sbjct: 169 KIGSNMPKQKQTLLFSATFPPKIESLAK 196
Score = 39.1 bits (87), Expect = 0.13
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
K+ ++ TGSGKTLA+ +PA++ + + + P +V+ PTRELA+Q+
Sbjct: 41 KDILAQSKTGSGKTLAFGIPAVMGTD-----VKSNKPQTIVITPTRELAEQV 87
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G Q + L RGVE+VIATPGRL+D +++ + NL + LVLDEADRMLDMGF P ++
Sbjct: 133 GVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQ 192
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+II + RQ L++SAT+ E++ L +
Sbjct: 193 RIINLLPKTRQNLLFSATFSPEIQKLAK 220
Score = 38.7 bits (86), Expect = 0.17
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHT 225
TG+GKT + LP + + N P R P+ AL+L PTRELA Q+ +
Sbjct: 66 TGTGKTAGFSLPILNRLMPLATENTSPARH---PVRALILTPTRELADQVAANVHTYAKF 122
Query: 226 SYVRNTCVFG 255
+ +R+T V+G
Sbjct: 123 TPLRSTVVYG 132
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + Q R L+RGV + IATPGRL+D +++G +L + VLDEADRMLDMGF P ++
Sbjct: 106 GVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALK 165
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I+ ++ RQT+ ++AT P +V L
Sbjct: 166 TIVSKLPKQRQTIFFTATMPPKVAQL 191
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G R T
Sbjct: 42 TGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLT 101
Query: 244 CVFG 255
+FG
Sbjct: 102 TIFG 105
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP+ QAR L G + ++A PGRL DFL+ G +++ ++LV DEADR+LDMGF+ +
Sbjct: 198 GAPRDLQARHLRNGCDALVACPGRLKDFLDGGDVSIRNLSFLVFDEADRLLDMGFQVHLD 257
Query: 435 KIIEQI--RPDRQTLMWSATWPKEVKNLLR 518
+I+ + QT+MWSATWP+ V+ + R
Sbjct: 258 EIMAYLDSASHPQTMMWSATWPESVQAMAR 287
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFG 219
TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V + G
Sbjct: 139 TGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKVFQNLG 186
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/84 (47%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ- 449
Q R++ +G IV TPGRL+D +++G L + YLVLDEADRMLDMGFEP +R+++
Sbjct: 398 QLREISKGCNIVCGTPGRLLDVIQRGWIGLTKLRYLVLDEADRMLDMGFEPDMRRLVASP 457
Query: 450 ---IRPDRQTLMWSATWPKEVKNL 512
+ +RQTL++SAT+P++++ L
Sbjct: 458 GMPPKENRQTLLFSATYPQDIQKL 481
Score = 41.1 bits (92), Expect = 0.031
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRG----DGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A++LP + + P A+++APTREL QI A F + +
Sbjct: 324 TGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVAPTRELINQIFLEARKFAYGTC 383
Query: 232 VRNTCVFG 255
VR V+G
Sbjct: 384 VRPVVVYG 391
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q R L+ GV+IV+ TPGR++D + + + L +LVLDEAD ML+MGF +
Sbjct: 111 GQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLE 170
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+I++ ++ DRQTL++SAT P ++K L R
Sbjct: 171 EIVKSLKTDRQTLLFSATMPPQIKKLAR 198
Score = 36.7 bits (81), Expect = 0.67
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
TG+GKT A+ INN + P AL+LAPTRELA Q+ + G
Sbjct: 50 TGTGKTAAF---GCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLG 98
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/88 (46%), Positives = 61/88 (69%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G REQA LE GV+IV+ TPGRL DF+ + +L +VLDEAD+MLDMGF +I+
Sbjct: 153 GQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIK 212
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
++ + RQT+++SAT+P+ +++L R
Sbjct: 213 TVMRDLPGSRQTVLFSATFPESIEHLSR 240
Score = 41.9 bits (94), Expect = 0.018
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
K+ + TGSGKT A+ LP + IN P+ + AL+L PTRELA Q+
Sbjct: 85 KDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQ-----ALILCPTRELASQV 131
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 88.6 bits (210), Expect = 2e-16
Identities = 47/90 (52%), Positives = 59/90 (65%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V GAP Q + L + V++V+ATPGRLID LE+G + R LVLDEADRMLDMGF
Sbjct: 109 VGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDD 168
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I+ I + +RQTL++SAT V NL R
Sbjct: 169 IKAIAARCPAERQTLLFSATLDGVVGNLAR 198
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 240
TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +G R
Sbjct: 47 TGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRT 105
Query: 241 TCVFG 255
C+ G
Sbjct: 106 ACLVG 110
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/86 (46%), Positives = 59/86 (68%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + Q L++G++I+IATPGRL+D + +G +L+ + VLDEADRMLDMGF IR
Sbjct: 192 GVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIR 251
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI+ ++ +Q+L +SAT P E+ L
Sbjct: 252 KILAELPKKKQSLFFSATMPPEITRL 277
Score = 41.1 bits (92), Expect = 0.031
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ +P + +N + +L++ PTRELA QI + +G + + +T
Sbjct: 128 TGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTST 187
Query: 244 CVFG 255
+FG
Sbjct: 188 VIFG 191
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA +Q + L G IVIATPGRL+ L+ GT NL++ +LVLDEADRMLDMGF I
Sbjct: 110 GATWDQQRKALTDGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIV 169
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
++I + +RQT+M+SAT P +++ L
Sbjct: 170 RVISYLPTERQTIMFSATMPTKMRAL 195
Score = 42.3 bits (95), Expect = 0.013
Identities = 27/64 (42%), Positives = 33/64 (51%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT AY+LP + I D LVL PTRELA QI Q F + V +
Sbjct: 47 TGTGKTAAYMLPILHKIIES----NTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSI 102
Query: 244 CVFG 255
V+G
Sbjct: 103 AVYG 106
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
C+ G R +A+ LERG IV+ TPGRL D L +G NL R +VLDEAD MLD+GF
Sbjct: 151 CIGGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGFRD 210
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
++ +I++ +R+TL++SAT +E+ L +
Sbjct: 211 ELEEILDATPAERRTLLFSATIAREIAALAK 241
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 64 TGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
TGSGKT+AY L A + + + P+AL++APTRELA Q+QQ
Sbjct: 89 TGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQ 135
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + Q + L RGVEI + PGRL+D LE+GT L+ L+LDEAD+M DMGF P +R
Sbjct: 107 GVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVR 166
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+I+ RQT+++SAT P ++ L R
Sbjct: 167 RILRLAPAQRQTMLFSATMPDAIRALAR 194
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A++LP + + P RG A+++ PTRELA+QIQ V G + +R+
Sbjct: 47 TGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEALGKYTGLRSV 102
Query: 244 CVFG 255
++G
Sbjct: 103 TLYG 106
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ GA + +Q L GVE+VIATPGRL+D LE L +CTY++LDEADRMLDMGFEP
Sbjct: 413 IGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPD 472
Query: 429 IRKIIEQIRPD 461
++K++E + PD
Sbjct: 473 VQKVLEYM-PD 482
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 347 TGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLG 406
Query: 232 VRNTCVFGVLLKESK 276
++ V G +E +
Sbjct: 407 IKTVSVIGGASREDQ 421
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 88.6 bits (210), Expect = 2e-16
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 17/107 (15%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V G P Q L+ G +I++ATPGRL+DF+++G ++V DE DRMLDMGFE
Sbjct: 253 VAYGGDPSGPQRDALQMGCDILVATPGRLLDFIKQGVVETTYVRFVVFDECDRMLDMGFE 312
Query: 423 PQIRKIIEQIRP-----------------DRQTLMWSATWPKEVKNL 512
PQIR I+ ++ P +RQTL++SAT+PKE+KNL
Sbjct: 313 PQIRDILHELPPIHHSVQDPSNPDITHQIERQTLLFSATFPKEIKNL 359
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/88 (46%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q + RG +VIATPGRL+DF+++ + ++VLDEADRMLDMGF +R
Sbjct: 355 GTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMR 414
Query: 435 KIIEQI--RPDRQTLMWSATWPKEVKNL 512
+I+ + RP+ QTLM+SAT+P+E++ +
Sbjct: 415 RIMTHVTMRPEHQTLMFSATFPEEIQRM 442
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A++LP + + P P ++++PTRELA QI A F SY++
Sbjct: 291 TGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIG 350
Query: 244 CVFG 255
V+G
Sbjct: 351 IVYG 354
Score = 34.3 bits (75), Expect = 3.6
Identities = 27/97 (27%), Positives = 50/97 (51%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ +A ++L +Y+ + IG + A ++ Q + ++ K +KL +L E Q G T
Sbjct: 440 QRMAGEFLKNYVFVAIGIVG-GACSDVKQTIYEVNKYAKRSKLIEILSE----QADG--T 492
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
I+FVETKR A+ ++ + +P I +L + E
Sbjct: 493 IVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQRE 529
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 88.6 bits (210), Expect = 2e-16
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Frame = +3
Query: 243 VCVWGA-PKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 413
+C++G K+EQ R L + V IV+ TPGR++D G+ +L TYLVLDEADRMLD
Sbjct: 271 ICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDK 330
Query: 414 GFEPQIRKIIEQIR---PDRQTLMWSATWPKEVKNL 512
GFEP IR II + R T M+SATWP V+ L
Sbjct: 331 GFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGL 366
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKENKLNVLLQEIGQSQEPGAKTI 685
LAE ++ +++ +GS +LSAN + Q V++ + + KE +LN L+ + +Q K +
Sbjct: 366 LAESFMNGPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLNDFLRSV-NAQRSKDKIL 424
Query: 686 IFVETKRKAENISRNIRRYGW 748
IF K++A+ I + +RR G+
Sbjct: 425 IFALYKKEAQRIEQTLRRGGF 445
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELAQQIQQVAADFGH 222
TGSGKT A+ LPA+ H+ + + +G LV+APTRELA Q ++ A G
Sbjct: 205 TGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGK 264
Query: 223 TSYVRNTCVFGVLLKESK 276
+ + C++G + K+ +
Sbjct: 265 SMGIGMICLYGGVSKQEQ 282
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/87 (45%), Positives = 59/87 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + Q + LE GV+I++A PGRL+D +E+G +L + LVLDEAD+MLDMGF I
Sbjct: 117 GVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIE 176
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLL 515
+I+ + DR T+++SAT PK + L+
Sbjct: 177 RIVATLPEDRHTVLFSATMPKSIAALV 203
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT ++ LP + + P +G LVLAPTREL QI F VR T
Sbjct: 53 TGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVT 112
Query: 244 CVFG 255
+FG
Sbjct: 113 TIFG 116
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/89 (48%), Positives = 58/89 (65%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
CV G R++ R LERG IV+ATPGRL D + +G+ +L +VLDEAD MLD+GF
Sbjct: 110 CVGGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLDEADEMLDLGFRE 169
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
+ I+E+ DRQTL++SAT K + L
Sbjct: 170 DLEFILEETPEDRQTLLFSATVSKPIAAL 198
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 64 TGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYVR 237
TGSGKT+ + L A + R P+ALV+APTRELA Q+ ++++ +G V
Sbjct: 48 TGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELALQVKRELSWLYGDAGAVL 107
Query: 238 NTCVFGVLLKESKPGTWRG 294
+CV G+ +++ + RG
Sbjct: 108 ASCVGGMDMRDERRALERG 126
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
CV G R++ R LERG IV+ TPGRL+D + +G+ + +VLDEAD MLD+GF
Sbjct: 109 CVGGMDMRDERRALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFRE 168
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
++ I+E +R+TLM+SAT PK + L
Sbjct: 169 ELELILEDTPKERRTLMFSATVPKGIAAL 197
Score = 41.1 bits (92), Expect = 0.031
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYV 234
TGSGKT+A+ L + + R P+ L++APTRELA Q+ +++ + +T+
Sbjct: 46 TGSGKTVAFGLAIANELLGGEDTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAE 105
Query: 235 RNTCVFGVLLKESKPGTWRG 294
TCV G+ +++ + RG
Sbjct: 106 IATCVGGMDMRDERRALERG 125
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/90 (46%), Positives = 61/90 (67%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V + GA QAR +E GV++++ATPGRL+D + G L +VLDEAD+MLD+GF
Sbjct: 163 VVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFI 222
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
P IR+I+ ++ RQ +M+SAT PK ++ L
Sbjct: 223 PAIRQIMAKLPRQRQAVMFSATMPKPIRAL 252
Score = 44.8 bits (101), Expect = 0.003
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 237
TG+GKT A++LP + I N P R ALVLAPTRELA QI A +G + R
Sbjct: 103 TGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTYG--KFTR 158
Query: 238 NTCVFGVLLKESKPG 282
+ V++ +KPG
Sbjct: 159 PS--VAVVIGGAKPG 171
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G + Q L+ G +I++ATPGRL+D +E+G +L LVLDEADRMLDMGF P
Sbjct: 173 VGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDMGFLPA 232
Query: 429 IRKIIEQIRPDRQTLMWSATWPKE 500
+R+I+ + +RQTL++SAT +E
Sbjct: 233 VRRIVRETPAERQTLLFSATLDEE 256
Score = 46.8 bits (106), Expect = 6e-04
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 20/88 (22%)
Frame = +1
Query: 64 TGSGKTLAYILPA---IVHINNQPPIRR----------------GDGPIALVLAPTRELA 186
TG+GKT A++LP + HI P+R G GP+ LV+ PTRELA
Sbjct: 92 TGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELA 151
Query: 187 QQIQQVAADFGH-TSYVRNTCVFGVLLK 267
QQI +VA T +V T V GV K
Sbjct: 152 QQIDEVAGKIADVTGHVAVTVVGGVSYK 179
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/92 (45%), Positives = 61/92 (66%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V V G Q + ERG ++++ATPGRLID L++ L +LVLDEAD+MLD+GF
Sbjct: 177 VIVGGVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFI 236
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+RKI + +RQT+++SAT PK+++ L R
Sbjct: 237 HALRKIAPLLPAERQTMLFSATMPKQMEELSR 268
Score = 37.1 bits (82), Expect = 0.51
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 234
TG+GKT A+ LP A++ +P R G L+LAPTREL QI + F S++
Sbjct: 117 TGTGKTAAFGLPLLDALMKAGTKPAPRTCRG---LILAPTRELVSQICESLRAFTEGSHL 173
Query: 235 RNTCVFG 255
+ + G
Sbjct: 174 KLQVIVG 180
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEP 425
G+ Q + L++GVEI++ TPGR+ID L TNL R +++VLDEADR+LD+GFE
Sbjct: 833 GSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFES 892
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
QI I+ R D+QT M SAT+P ++N+ +
Sbjct: 893 QIYNILRNCRKDKQTAMISATFPNYIQNMAK 923
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A + +
Sbjct: 769 TGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEIL 828
Query: 244 CVFG 255
V+G
Sbjct: 829 AVYG 832
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 88.2 bits (209), Expect = 2e-16
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G Q R LER ++V+ATPGRL+D +E+GT +L LVLDEADRMLDMGF +
Sbjct: 106 GVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVE 164
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+II++ DRQT+M+SAT K+++ L
Sbjct: 165 EIIDECPSDRQTMMFSATVSKDIQYL 190
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ TGSGKTLA+ I I +G+G ALVL PTRELA+Q+Q +F
Sbjct: 40 KDIIGGAATGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELAEQVQNSLKEFS 93
Query: 220 HTSYVRNTCVFG 255
+R ++G
Sbjct: 94 RHKQLRVAPIYG 105
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 87.8 bits (208), Expect = 3e-16
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V GAP Q L++GV++++ATPGRL+D + G +L LVLDEADRMLDMGF
Sbjct: 151 VGGAPYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADD 210
Query: 429 IRKIIEQIRPDRQTLMWSATW 491
I I+ DRQT+M SATW
Sbjct: 211 ISDILRAAPIDRQTIMCSATW 231
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TGSGKT A+++P + ++ + AL+L PTRELAQQ+
Sbjct: 90 TGSGKTAAFVIPVLDRLSRATSFDKLTK--ALILTPTRELAQQV 131
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVE--IVIATPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDM 413
V V+G + ++ R + IVI TPGRL D + ++G +L++ + +VLDEADRMLDM
Sbjct: 147 VVVYGGASAYEQKNALRSKKPCIVIGTPGRLTDLMSQEGVLSLEKLSVIVLDEADRMLDM 206
Query: 414 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
GFEPQI+ I RQTL++SATWPK V+ L
Sbjct: 207 GFEPQIKTIFGATPASRQTLLFSATWPKSVRKL 239
Score = 39.9 bits (89), Expect = 0.072
Identities = 28/106 (26%), Positives = 49/106 (46%)
Frame = +2
Query: 446 ANTPRQTDFDVVSYLAQRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKEN 625
A P+ YL Q + E ++G+ Q +L+AN I Q ++HEK+
Sbjct: 230 ATWPKSVRKLAACYLNQDKSRVREVFIGEGAQDG----ELAANKAITQRFVEARDHEKDE 285
Query: 626 KLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCI 763
L L+ E+ ++ +IF TKR+ EN+++ G+ V +
Sbjct: 286 HLYNLICELPDD----SRVVIFANTKRRVENLAKTFSAEGFGVVSV 327
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA+ H +++ G LV+APTRELA QIQ FG +
Sbjct: 99 TGSGKTLAF------H-----GMKKHGGVEGLVVAPTRELAIQIQAECEKFGAERGFHSV 147
Query: 244 CVFG 255
V+G
Sbjct: 148 VVYG 151
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 87.8 bits (208), Expect = 3e-16
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAPK EQAR + ++I TPGRL+D + G+ + + YLVLDEADRMLD GFE IR
Sbjct: 273 GAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIR 331
Query: 435 KIIEQIRPD------RQTLMWSATWPKEVKNL 512
II PD RQT+ +SATWP+ V+ L
Sbjct: 332 NIISH-TPDPTRNGSRQTVFFSATWPESVRAL 362
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +2
Query: 449 NTPRQTDFDVVSYLAQRSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKEN 625
N RQT F ++ + LA +L D ++I IGS +L+A+ NI QIV+I + KE
Sbjct: 343 NGSRQTVFFSATW-PESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKER 401
Query: 626 KLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRR 739
L+ LL++ S K +IFV K++A + + R
Sbjct: 402 MLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLAR 439
Score = 37.5 bits (83), Expect = 0.38
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 192
TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q
Sbjct: 211 TGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQ 251
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+ ++G E Q R L GV++VI TPGR++D L + T +L + +VLDEAD MLDMGF
Sbjct: 106 IAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGF 165
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
I KI++ +RQTL++SAT P E++ L
Sbjct: 166 IEDIEKILQNTPAERQTLLFSATMPPEIRRL 196
Score = 37.9 bits (84), Expect = 0.29
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ + TG+GKT A+ +P + + P +R ALVL PTRELA Q+ + G
Sbjct: 44 KDVIGQAQTGTGKTAAFGVPIVERL---VPGQRAVQ--ALVLTPTRELAIQVAEEITKIG 98
Query: 220 HTSYVRNTCVFG 255
+ V+ ++G
Sbjct: 99 RHARVKTIAIYG 110
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 87.4 bits (207), Expect = 4e-16
Identities = 40/86 (46%), Positives = 59/86 (68%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q + L++GV+I+I TPGR++D +++GT +L ++LDEAD MLDMGF I
Sbjct: 110 GQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIE 169
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I+E I +RQ L++SAT P+E+ L
Sbjct: 170 YILEDIPYERQFLLFSATLPQEILQL 195
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
K+ + + TG+GKT A+ +P + +I+++ + A++L PTRELA Q+ +
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSE-----DNNLQAIILCPTRELAIQVAE 90
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/88 (46%), Positives = 60/88 (68%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q + L RGV+I+I TPGR+ID +++ T L + +VLDEAD+MLDMGF I
Sbjct: 110 GQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIE 169
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+I+ I +RQT++ SAT+P E+ ++ R
Sbjct: 170 EILSHIPKERQTVILSATFPPEILDISR 197
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 87.4 bits (207), Expect = 4e-16
Identities = 37/93 (39%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 VCVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
+C++G P +Q R L+ GV++ + TPGR+ID +++G NL ++VLDEAD+ML +GF
Sbjct: 208 ICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGF 267
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ I+E++ RQ++M+SAT P +++L +
Sbjct: 268 AEDVEIILEKLPEKRQSMMFSATMPSWIRSLTK 300
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
R TG+GKTLA+ +P I I RG P+ LVLAPTRELA+Q+++
Sbjct: 147 RARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEK 196
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G K Q + + G++++IATPGRL D + G +L + +LVLDEADRMLDMGF ++
Sbjct: 197 GVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVK 256
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+I + +RQT ++SAT PKE+ +L
Sbjct: 257 RIAKATHAERQTALFSATMPKEIASL 282
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+ LP + I RR AL+LAPTRELA QI+Q + ++++
Sbjct: 133 TGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTA 192
Query: 244 CVFGVLLKESK 276
V G + K S+
Sbjct: 193 LVLGGVSKLSQ 203
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 87.0 bits (206), Expect = 5e-16
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGAPKREQARD-LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
H + G + RD L RGV+++IATPGRL+D +G L + + LV+DEADRMLDMG
Sbjct: 393 HALLIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMG 452
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
F P I KI+ + RQTL +SAT E++ L
Sbjct: 453 FIPDIEKIVALLPAHRQTLFFSATMAPEIRRL 484
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT ++ LP + + R P +L+L PTRELA Q+ + +G Y+R T
Sbjct: 337 TGTGKTASFTLPMLQKLAGSRA--RARMPRSLILEPTRELALQVAENFKLYG--KYLRLT 392
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 87.0 bits (206), Expect = 5e-16
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V V+G E QA+ L +GV+I++ TPGR++D E+G +L L LDEADRMLDMGF
Sbjct: 104 VTVYGGTDLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGF 163
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEV 503
P I I+E++ +QTL++SAT+P+E+
Sbjct: 164 FPDIMWIVERMTSRQQTLLFSATFPQEI 191
Score = 36.7 bits (81), Expect = 0.67
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
TGSGKT A+ LP + ++ ALVLAPTRELA Q+ Q
Sbjct: 51 TGSGKTAAFGLPILERCQPSGKLQ------ALVLAPTRELANQVAQ 90
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 87.0 bits (206), Expect = 5e-16
Identities = 42/91 (46%), Positives = 59/91 (64%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
CV G R + R L+RG IV+ TPGRL D +E+G+ +L +VLDEAD MLD+GF
Sbjct: 123 CVGGMDYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRAVVLDEADEMLDLGFRE 182
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ I+ +R+TLM+SAT PKE++ L +
Sbjct: 183 DLEFILGSAPEERRTLMFSATVPKEIEALAK 213
Score = 42.3 bits (95), Expect = 0.013
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +1
Query: 19 LADSYVWKEFSWRTTTGSGKTLAY-ILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
LA+ ++ TGSGKT+A+ I A + + D PIAL +APTRELA Q+
Sbjct: 46 LAEGVAGRDALVSAQTGSGKTVAFGIAIADQILQGADRLLFADTPIALAIAPTRELALQV 105
Query: 196 -QQVAADFGHTSYVRNTCVFGVLLKESKPGTWRG 294
+++ +G TCV G+ + + RG
Sbjct: 106 ARELGWLYGEAGAHIATCVGGMDYRTERRALDRG 139
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 87.0 bits (206), Expect = 5e-16
Identities = 38/78 (48%), Positives = 55/78 (70%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q+R L RGV++++ TPGRL F E L+ +YLV+DEAD+ML GFEPQI++++
Sbjct: 222 QSRVLRRGVDVLVGTPGRLTKFAEASVVYLREVSYLVIDEADQMLTDGFEPQIQEVLALT 281
Query: 453 RPDRQTLMWSATWPKEVK 506
P+RQ ++SATWP V+
Sbjct: 282 HPNRQVSLFSATWPPAVE 299
Score = 50.0 bits (114), Expect = 7e-05
Identities = 30/64 (46%), Positives = 35/64 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKTLA++LP + H+ Q G P LVLAPTREL QI A F +R
Sbjct: 152 TGSGKTLAFLLPGMAHVAAQV----GTEPRMLVLAPTRELVMQIATEAEQFALGFRLRLG 207
Query: 244 CVFG 255
FG
Sbjct: 208 LAFG 211
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 87.0 bits (206), Expect = 5e-16
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = +3
Query: 249 VWGAPKREQARDLE-RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
V G +Q + LE R +I++ATPGRL+DF ++G +L +VLDEADRMLDMGF P
Sbjct: 119 VGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIP 178
Query: 426 QIRKIIEQI--RPDRQTLMWSATWPKEVKNLLR 518
Q+R+II Q + +RQTL++SAT+ +V NL +
Sbjct: 179 QVRQIIRQTPHKGERQTLLFSATFTDDVMNLAK 211
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHI-NNQPPIRRGDG-PIALVLAPTRELAQQIQQVAA 210
R TG+GKT A+++ I + PP R G P AL++APTREL QI + AA
Sbjct: 52 RAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAA 105
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 86.6 bits (205), Expect = 6e-16
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G QA L G +++ATPGRL DF+++G N Q YL+LDEAD+M+DMGF PQI
Sbjct: 566 GVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYLILDEADKMIDMGFGPQIE 625
Query: 435 KIIE--QIRPD--RQTLMWSATWPKEVKNL 512
IIE + P R TLM+SAT+P ++++L
Sbjct: 626 HIIEFSGMPPKGIRNTLMFSATFPDQIQHL 655
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQ--PPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 225
TGSGKT +++LP I ++ N+ I DG P+A +LAPTREL Q+ A F +
Sbjct: 496 TGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRELVVQLFTEARKFSYN 555
Query: 226 SYVRNTCVFG 255
S ++ ++G
Sbjct: 556 SSLKPVVLYG 565
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 86.6 bits (205), Expect = 6e-16
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G Q + + GV IVI TPGR+ D + K N+ C ++VLDEADRMLD FE +
Sbjct: 234 IGGMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELE 293
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLRIT 524
IR I+E RQT+++SAT PK+++ + T
Sbjct: 294 IRNILEHFTGPRQTMLFSATLPKKIQEFTKQT 325
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 216
+G GKTL ++LPA++ + P+ RG+GP AL+L P+ ELA ++A +
Sbjct: 163 SGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLPSHELAILTYELAKQY 216
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 86.6 bits (205), Expect = 6e-16
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q R L+ V++VI TPGR+ID +++GT +L T +LDEAD+MLDMGF I
Sbjct: 111 GQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIE 170
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I DRQT+++SAT P+ + ++ R
Sbjct: 171 DIFRDTPKDRQTILFSATMPQPILDITR 198
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q L+ I++ATPGRL+D L+KGT +L LV+DEADRMLDMGF I
Sbjct: 109 GQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAID 168
Query: 435 KIIEQIRPDRQTLMWSATWPKEV 503
+I RQTL++SATWP+ +
Sbjct: 169 DVIRFAPASRQTLLFSATWPEAI 191
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 86.2 bits (204), Expect = 8e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q + L++GV++VI TPGR+ID L + T L ++LDEAD MLDMGF I I+ Q+
Sbjct: 116 QIKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQV 175
Query: 453 RPDRQTLMWSATWPKEVKNLLR 518
+ +RQTL++SAT P +K L R
Sbjct: 176 KNERQTLLFSATMPPAIKKLSR 197
Score = 33.9 bits (74), Expect = 4.7
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ +P + ++ ++ AL+L PTRELA Q+ +R
Sbjct: 52 TGTGKTAAFGIPVVEKVSTGRHVQ------ALILTPTRELAIQVSGEIQKLSKHKKIRTL 105
Query: 244 CVFG 255
++G
Sbjct: 106 PIYG 109
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 86.2 bits (204), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G + +Q L G EIVIATPGRLID LE L RCTY+VLDEADRM+DMGFEP
Sbjct: 503 IGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPD 562
Query: 429 IRKIIEQIRPDRQ 467
++KI+E + Q
Sbjct: 563 VQKILEHMPVSNQ 575
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++ FG
Sbjct: 437 TGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLG 496
Query: 232 VRNTCVFGVLLKESK 276
+R V G + +E +
Sbjct: 497 IRTVAVIGGISREDQ 511
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q L+RGV IV+ TPGR+ID LE+G L + + VLDEAD ML MGF + KI+ Q
Sbjct: 114 QMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQA 173
Query: 453 RPDRQTLMWSATWPKEVKNLL 515
DRQT ++SAT P ++ L+
Sbjct: 174 PQDRQTALFSATMPPSIRMLV 194
Score = 42.7 bits (96), Expect = 0.010
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 234
++ TG+GKT A+ LP + ++ Q + A+VL PTRELA Q+ A F S +
Sbjct: 46 QSQTGTGKTAAFSLPILERLDPQQKAVQ-----AIVLTPTRELAIQVHDAMAQFVGNSGL 100
Query: 235 RNTCVFG 255
R ++G
Sbjct: 101 RTLAIYG 107
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 85.8 bits (203), Expect = 1e-15
Identities = 42/86 (48%), Positives = 56/86 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G +Q R + G +IVIATPGRLI L G+ +L +Y VLDEADRMLDMGF I
Sbjct: 112 GVAWEQQRRGMAMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIM 171
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+I +Q+ QT+M+SAT P +++ L
Sbjct: 172 QIYKQLPSSCQTVMFSATMPPKIRKL 197
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT AY+LP + ++ D A+++APTRELAQQI Q F + V
Sbjct: 47 TGTGKTAAYLLPILDRLSAGE--FASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAV 104
Query: 244 CVFG 255
++G
Sbjct: 105 AIYG 108
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 85.8 bits (203), Expect = 1e-15
Identities = 38/83 (45%), Positives = 60/83 (72%)
Frame = +3
Query: 270 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 449
+Q +L++ IV+ TPGR++D +EKGT L R +YLV+DEAD ML+MGF Q+ II+
Sbjct: 112 KQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKH 171
Query: 450 IRPDRQTLMWSATWPKEVKNLLR 518
+ +R T+++SAT P++++ L R
Sbjct: 172 LPTERTTMLFSATLPQDIEKLSR 194
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ ++ TGSGKT ++ +P + + N + P AL+L PTRELA Q+++ + G
Sbjct: 40 KDLVVKSQTGSGKTASFGIP-LCELANWDENK----PQALILTPTRELAVQVKEDITNIG 94
Query: 220 HTSYVRNTCVFG 255
++ T VFG
Sbjct: 95 RFKRIKATAVFG 106
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G Q R LE G ++V+ TPGR+ D L++GT +VLDEADRMLD+GF PQI
Sbjct: 151 GKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIE 210
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+I+ + +RQTL+ SAT P V+ L
Sbjct: 211 RIMRKCPRNRQTLLLSATLPPVVRRL 236
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
K+ + TG+GKT A+ +P + +++ R P A+V+ PTRELA Q+
Sbjct: 82 KDVIGQARTGTGKTAAFSIPILEQLDSLEDCR---DPQAIVIVPTRELADQV 130
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/117 (36%), Positives = 71/117 (60%)
Frame = +3
Query: 162 LGAYQRVSTTNSASCCRFWTHILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFL 341
L + +++ + +C + H+ S + G P Q R L+RG +I++ATPGRL+D +
Sbjct: 85 LSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLDLI 144
Query: 342 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
++ L+ VLDEAD+MLD+GF +R+I + + +RQTL +SAT PK ++ L
Sbjct: 145 DQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQTLFFSATMPKTIQEL 201
Score = 50.0 bits (114), Expect = 7e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ LP+I ++ P R G L+L+PTRELA QI + D+ +
Sbjct: 52 TGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVN 111
Query: 244 CVFG 255
VFG
Sbjct: 112 AVFG 115
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G QA L G E+V+ATPGRL D +++G L + + VLDEAD+M DMGF PQ
Sbjct: 175 VGGMSIGRQASALRGGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEADQMADMGFMPQ 234
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ +++Q+RP+ Q +++SAT + V L+R
Sbjct: 235 VTALLDQVRPEGQRMLFSATLDRNVDLLVR 264
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +1
Query: 10 SSRLADSYVWKEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 189
++ L +S ++ R TGSGKTLA+ L + + R P+ LVL PTRELAQ
Sbjct: 97 AATLPNSLAGRDIMGRGRTGSGKTLAFGLALLARTAGRRAEPRQ--PLGLVLVPTRELAQ 154
Query: 190 QIQQVAADFGHTSYVRNTCVFG 255
Q+ + + +R V G
Sbjct: 155 QVTDALTPYARSVKLRLATVVG 176
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA Q + L +G +IV+ATPGRL+D + K +L+ LVLDEADRMLD+GF ++
Sbjct: 112 GAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELD 171
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I++Q + QTL++SAT+P +VK L
Sbjct: 172 DILDQTPGNVQTLLFSATFPDKVKEL 197
Score = 39.9 bits (89), Expect = 0.072
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT--SYVR 237
TGSGKT ++LP + +++ P + ALVL PTRELA Q+ Q + +R
Sbjct: 47 TGSGKTAGFVLPLLEKLHSIPA-PGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIR 105
Query: 238 NTCVFG 255
+ ++G
Sbjct: 106 SVAIYG 111
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G P + Q L RGV+++IATPGRL D + +G+ +L T L LDEAD M D+GF PQ
Sbjct: 120 VGGIPIKRQVEILSRGVDLLIATPGRLADHVAQGSVSLDDVTVLALDEADHMADLGFMPQ 179
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ I+++ D Q L++SAT EV L+R
Sbjct: 180 VTTILDKTPADGQRLLFSATLDGEVDTLVR 209
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +1
Query: 10 SSRLADSYVWKEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 189
++ + D ++ R TGSGKTLA+ LP +V + RRG P +VL PTRELA
Sbjct: 42 AATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRG-FPRGIVLVPTRELAL 99
Query: 190 QIQQ 201
QI++
Sbjct: 100 QIER 103
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGAPKREQARD-LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
H + G RD L +GV+++IATPGRLID ++G L LV+DEADRMLDMG
Sbjct: 325 HALLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMG 384
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
F P + +I+ + +RQTL +SAT E++ L
Sbjct: 385 FIPDVERIVSLLPHNRQTLFFSATMAPEIRRL 416
Score = 36.7 bits (81), Expect = 0.67
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT ++ LP + ++++ R P +L+L PTRELA Q+ + +G + +
Sbjct: 269 TGTGKTASFTLPMMDILSDRRA--RARMPRSLILEPTRELALQVAENFVKYGQYLKLNHA 326
Query: 244 CVFG 255
+ G
Sbjct: 327 LLIG 330
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q R L+R V++V+ TPGR+ID L +GT ++ + YLV+DEAD MLDMGF + I+ +
Sbjct: 114 QIRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKT 173
Query: 453 RPDRQTLMWSATWPKEVKNLLR 518
++Q LM+SAT P+ + L R
Sbjct: 174 NKEKQILMFSATMPQRIVTLAR 195
Score = 33.5 bits (73), Expect = 6.2
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TG+GKT A+ +P I ++ + + ALVL PTRELA Q+
Sbjct: 49 TGTGKTAAFGIPLIERLDE-----KANDVQALVLTPTRELALQV 87
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
VCV+G Q L RGV++V+ TPGR+ID +E + L YLVLDEAD+ML +GF
Sbjct: 210 VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGF 269
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
E + I+E + RQ++++SAT P VK L R
Sbjct: 270 EEAVESILENLPTKRQSMLFSATMPTWVKKLAR 302
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQP----PIRR-GDGPIALVLAPTRELAQQIQQVAADFG 219
R TG+GKTLA+ +P I + + RR G P LVLAPTRELA+Q+++ +
Sbjct: 145 RAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE-- 202
Query: 220 HTSYVRNTCVFG 255
Y+ CV+G
Sbjct: 203 SAPYLSTVCVYG 214
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G ++ Q L G++I++ATPGRL+D + +G +L + VLDEADRMLDMGF I+
Sbjct: 108 GVGQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIK 167
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+I++ + RQTL +SAT P E++ L
Sbjct: 168 RILKLLPARRQTLFFSATMPPEIETL 193
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ +P + + + G ALVL PTRELA QI + +G + +++
Sbjct: 47 TGTGKTAAFSIPILQKLYKTDHRK---GIKALVLTPTRELAIQIGESFEAYGRYTGLKHA 103
Query: 244 CVFG 255
+FG
Sbjct: 104 VIFG 107
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G ++ Q +E G++I++ATPGRL+D +E G N + VLDEAD MLDMGF ++
Sbjct: 112 GVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQ 171
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
II ++ RQTL++SAT P E++ L
Sbjct: 172 SIISKLPKSRQTLLFSATMPAEIEIL 197
Score = 41.9 bits (94), Expect = 0.018
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ LP I + +L+L PTRELA QI Q D+ ++
Sbjct: 48 TGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTK 107
Query: 244 CVFG 255
V+G
Sbjct: 108 VVYG 111
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/88 (47%), Positives = 56/88 (63%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GAP Q R L +GV++V+ATPGR +D + +GT L +VLDEAD MLDMGF I
Sbjct: 165 GAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDID 224
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I+EQ RQT+++SAT P + + R
Sbjct: 225 AILEQAPQKRQTVLFSATLPPRMDQIAR 252
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSY 231
+ TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +G
Sbjct: 100 QAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLG 156
Query: 232 VRNTCVFG 255
R V+G
Sbjct: 157 ARVLPVYG 164
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q + L GV++++ATPGRL+D +++ + LVLDEADRMLDMGF I+
Sbjct: 110 GVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIK 169
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
KI+ + RQ LM+SAT+ E++ L +
Sbjct: 170 KILALLPAKRQNLMFSATFSDEIRELAK 197
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G +R+
Sbjct: 47 TGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYGKYLPLRSA 105
Query: 244 CVFG 255
VFG
Sbjct: 106 VVFG 109
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G ++ Q L++GV+I++ATPGRL+D +G +L R VLDEADRMLDMGF +R
Sbjct: 109 GVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVR 168
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLL 515
++++ + +QTL +SAT P EV +L+
Sbjct: 169 RVLKLLPAVKQTLFFSATMPPEVMDLV 195
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKT A+ P + + P R PI +L+L PTRELA QIQ+ +G +R+
Sbjct: 47 TGTGKTCAFAAPILQRLGGDIPAGR---PIRSLILTPTRELALQIQESFEAYGKHLPLRS 103
Query: 241 TCVFG 255
+FG
Sbjct: 104 AVIFG 108
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G + L RG +I+IATPGRL+D +++ NL LVLDEAD+MLD+GF
Sbjct: 110 VGGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHA 169
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNLL 515
+R+I + + +RQTL +SAT PK +K L+
Sbjct: 170 LRRISQLVPKERQTLFFSATMPKAIKELV 198
Score = 41.5 bits (93), Expect = 0.024
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A++LP+I + LVLAPTREL QI A D+G + ++
Sbjct: 48 TGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQ 107
Query: 244 CVFG 255
+ G
Sbjct: 108 SIVG 111
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Frame = +3
Query: 243 VCV--WGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
VCV G + Q + + G +++ATPGRL+DF+++G + ++VLDEADRMLDMG
Sbjct: 280 VCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMG 339
Query: 417 FEPQIRKIIEQI----RPDRQTLMWSATWPKEVKNL 512
F P I K++ + RQTLM+SAT+P E++ L
Sbjct: 340 FLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQEL 375
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 237
TGSGKT A++LP I H+ + + + R P +++APTRELA QI F H + ++
Sbjct: 220 TGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLK 279
Query: 238 NTCV 249
CV
Sbjct: 280 -VCV 282
Score = 38.3 bits (85), Expect = 0.22
Identities = 28/97 (28%), Positives = 50/97 (51%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ELA +L +YI + +G + A ++ Q + + ++ +K KL +EI P T
Sbjct: 373 QELAGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-T 426
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
++FVETKR A+ ++ + +P I +L R E
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQRERE 463
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G Q R LERG +++IATPGRL+D E+GT L LV+DEADRMLDMGF P
Sbjct: 112 IGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIPD 171
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNL 512
I +I + RQTL +SAT E+ L
Sbjct: 172 IERICKLTPFTRQTLFFSATMAPEIIKL 199
Score = 36.3 bits (80), Expect = 0.89
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
TG+GKT +++LP + + R P L+L PTRELA Q+++ +G
Sbjct: 52 TGTGKTASFVLPMLTLLEKGRAKARM--PRTLILEPTRELAAQVKENFDKYG 101
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/86 (45%), Positives = 56/86 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q L RGV++V+ TPGR++D + +GT + T LVLDEAD ML MGF +
Sbjct: 177 GTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVE 236
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I+EQ+ +RQ +++SAT P E++ L
Sbjct: 237 WILEQLPKERQVVLFSATMPPEIRRL 262
Score = 36.3 bits (80), Expect = 0.89
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TG+GKT A+ LP + + + P LVLAPTRELA Q+
Sbjct: 117 TGTGKTAAFALPLLERLESGQKT-----PQVLVLAPTRELAMQV 155
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/97 (41%), Positives = 62/97 (63%)
Frame = +3
Query: 222 HILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 401
H+ + + + G +EQ + +++GV+++IATPGRL+D E+G L +V+DEADR
Sbjct: 108 HVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADR 167
Query: 402 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
MLDMGF P I +I + RQTL +SAT E++ +
Sbjct: 168 MLDMGFIPDIERIFGLVPFTRQTLFFSATMAPEIERI 204
Score = 39.1 bits (87), Expect = 0.13
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 240
TG+GKT ++ LP I + R P +LVL PTRELA Q+ + + H +
Sbjct: 57 TGTGKTASFTLPMITMLARGRA--RARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKA 114
Query: 241 TCVFGVLLKESKPGTWRG 294
+ GV KE + +G
Sbjct: 115 LLIGGVSFKEQEQAIDKG 132
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V V+G E Q R LE+ V++VI TPGR+ID+ G+ L + LV+DEADRMLDMGF
Sbjct: 231 VVVFGGMDHEKQRRSLEQPVDLVIGTPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGF 290
Query: 420 EPQIRKIIEQI--RPDRQTLMWSATWPKEVKNL 512
P +++I+ Q+ + +RQTL++SAT + L
Sbjct: 291 IPDVKRIVSQLPRKGERQTLLFSATLEDHILRL 323
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 216
++ + + TG+GKT A++L + N P R G P ALVLAPTRELA QIQ+ A
Sbjct: 163 RDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVL 222
Query: 217 GHTSYVRNTCVFG 255
+ + + VFG
Sbjct: 223 EIFTGLTSVVVFG 235
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G +Q R L GV++V+A PGRL+D + +GT ++ L++DEADRM DMGF+P I+
Sbjct: 107 GVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQ 166
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I++ + QTL++SAT P EV+ L
Sbjct: 167 SILKCLVQPHQTLLFSATMPPEVRKL 192
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT AY LP I + + P RG LV+APTRELA QI G + +R
Sbjct: 47 TGTGKTAAYALPIIQKMLSTP---RGRVR-TLVIAPTRELACQISDSFRSLGQRARIREC 102
Query: 244 CVFG 255
++G
Sbjct: 103 SIYG 106
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V GA Q + + G I++ATPGRL+DFLEKG YLVLDEADRMLDMGF
Sbjct: 371 VAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSLKYLVLDEADRMLDMGFL 430
Query: 423 PQIRKII--EQIRP--DRQTLMWSATWPKEVKNL 512
I+ +I + + P +R TLM+SAT+P E++ L
Sbjct: 431 SSIKTVINHKTMTPTAERITLMFSATFPHEIQEL 464
Score = 50.0 bits (114), Expect = 7e-05
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A++LP + +I NN P P LV+ PTRELA QI + A F H+S
Sbjct: 307 TGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFSHSSV 366
Query: 232 VRNTCVFG 255
+ +G
Sbjct: 367 AKCCVAYG 374
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 84.2 bits (199), Expect = 3e-15
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V V+G R Q +L +G +IATPGRLIDFL++G + C +VLDEADRMLDMGF
Sbjct: 222 VGVYGGQNRSRQIHELSKGCHFMIATPGRLIDFLDEGMLRMDHCHSVVLDEADRMLDMGF 281
Query: 420 EPQIRKIIEQIRPD------------RQTLMWSATWPKEVKNLLR 518
E QIRKI+ PD RQT+++SAT+P V + R
Sbjct: 282 EHQIRKILS--NPDYGMPQPSGDGLPRQTVLFSATFPPSVLQIGR 324
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/54 (51%), Positives = 32/54 (59%), Gaps = 10/54 (18%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPP------IRRGD----GPIALVLAPTRELAQQI 195
TGSGKTLAY+LP + I N P + + D P ALVL PTREL QQI
Sbjct: 153 TGSGKTLAYVLPIVNRILNSYPKLAMNTLAKSDLNIQCPSALVLVPTRELVQQI 206
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q + L+ GV+I++ATPGRL+D + + LVLDEADRMLDMGF I+
Sbjct: 133 GVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIK 192
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
K+IE + +RQ +M+SAT+ +K L
Sbjct: 193 KVIEYLPKNRQNMMFSATFSTPIKKL 218
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ TG+GKT A+ILP I + + +R +LVL PTRELA Q++ A +
Sbjct: 62 KDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKAYT 120
Query: 220 HTSYVRNTCVFG 255
+R+ VFG
Sbjct: 121 KYLALRSDAVFG 132
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 83.8 bits (198), Expect = 4e-15
Identities = 35/87 (40%), Positives = 57/87 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA ++Q LE G I++ TPGR+ D + +G L C + VLDEAD ML+ GF ++
Sbjct: 134 GASMKQQEDALEEGTPIIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVT 193
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLL 515
+I++++ RQ L++SAT P +++NL+
Sbjct: 194 RILDRLPKTRQVLLFSATVPTDIQNLI 220
Score = 33.9 bits (74), Expect = 4.7
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
K+ R+ TG+GKT A+ LP + I R AL+L PTRELA Q+
Sbjct: 67 KDLIVRSKTGTGKTAAFGLPLLEKIPADERRVR-----ALILCPTRELALQV 113
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/88 (47%), Positives = 54/88 (61%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA Q L RGV++V+ TPGRLID LE+G +L Y VLDEAD ML +GF I
Sbjct: 111 GAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIE 170
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I++Q RQT+++SAT E+ L R
Sbjct: 171 TILQQTPAARQTMLFSATLNDEIHRLAR 198
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
K+ R TG+GKTLA+ LP I ++ + + RG P A+V+APTRELA+Q+ +
Sbjct: 38 KDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRERGRLPRAIVIAPTRELAKQVAE 94
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = +3
Query: 270 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 449
EQ R L G I++ATPGRL+D L K +L + T+LV DEADRMLDMGF+ +I +++++
Sbjct: 125 EQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKR 184
Query: 450 IRPDRQTLMWSAT 488
+ RQTL++SAT
Sbjct: 185 LPSTRQTLLFSAT 197
Score = 44.0 bits (99), Expect = 0.004
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Frame = +1
Query: 64 TGSGKTLAYILPAI----VHINN---QPPIRR-GDGPI-ALVLAPTRELAQQIQQVAADF 216
TG+GKT A+ LP + H +N QP + PI ALVL PTRELAQQ+ +
Sbjct: 47 TGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQY 106
Query: 217 GHTSYVRNTCVFG 255
+ S V + V+G
Sbjct: 107 AYGSSVTSVMVYG 119
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/86 (45%), Positives = 56/86 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + Q + L+RG I++ATPGRL+D + +G L + VLDEADRMLDMGF P ++
Sbjct: 112 GVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLK 171
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+II Q+ RQ+L +SAT ++ L
Sbjct: 172 RIITQLPTQRQSLFFSATLAPKITEL 197
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A LP + + P+ALVLAPTRELA QI +G +R+
Sbjct: 48 TGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSV 107
Query: 244 CVFG 255
++G
Sbjct: 108 LIYG 111
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P R Q L+R IV+ TPGR+ID + + L+ +VLDEADRMLD+GF P I
Sbjct: 111 GKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIE 170
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI+ + +RQTL+ SAT P ++ L
Sbjct: 171 KILRRCPEERQTLLLSATVPPTIEKL 196
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A H +
Sbjct: 50 TGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAKLTHGQRINVV 106
Query: 244 CVFG 255
V+G
Sbjct: 107 AVYG 110
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Frame = +3
Query: 279 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-- 452
R +++ +++ TPGRL DFL K +L YL+LDEADRMLDMGF P+I+ II
Sbjct: 476 RQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLILDEADRMLDMGFLPEIKAIINDFDM 535
Query: 453 --RPDRQTLMWSATWPKEVKNL 512
+ DR TLM+SAT+P E++NL
Sbjct: 536 PPKEDRHTLMFSATFPTEIQNL 557
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAI---VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 228
TGSGKT A+++P + + ++ + P+ALV+APTRELA QIQ+ A F +
Sbjct: 399 TGSGKTAAFLIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKEARKFAQNT 458
Query: 229 YVRNTCVFG 255
++ ++G
Sbjct: 459 SIKPVVIYG 467
Score = 37.1 bits (82), Expect = 0.51
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA ++L +Y+ + IG + + +I Q + +E K +KL +L G + +
Sbjct: 555 QNLAAEFLNNYVYLTIGKVG-GTHSDITQCIMEVEESAKRDKLIEILDTEGTN-----RN 608
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
++FV+TKR A+ ++ + + G+ I +L ++ E
Sbjct: 609 LVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQRE 645
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 83.8 bits (198), Expect = 4e-15
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Frame = +3
Query: 231 CS*HVCVWGAPKREQA-RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 407
C V ++G + + R + +G I+ ATPGRL+D + K L++ YLVLDEADRML
Sbjct: 393 CVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRML 452
Query: 408 DMGFEPQIRKIIE----QIRPDRQTLMWSATWPKEVKNL 512
DMGF P+++K+I + RQTLM+SAT+P+E++ L
Sbjct: 453 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 491
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A++LP + H+ + + P +++APTREL QI A F +
Sbjct: 334 TGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTC 393
Query: 232 VRNTCVFG 255
VR ++G
Sbjct: 394 VRAVVIYG 401
Score = 33.1 bits (72), Expect = 8.3
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 503 EELAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAK 679
+ LA ++L +Y+ + +G + A ++ Q V + K KL +L+ IG +
Sbjct: 489 QRLAAEFLKSNYLFVAVGQVG-GACRDVQQTVLQVGQFSKREKLVEILRNIGDE-----R 542
Query: 680 TIIFVETKRKAENIS 724
T++FVETK+KA+ I+
Sbjct: 543 TMVFVETKKKADFIA 557
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 83.4 bits (197), Expect = 6e-15
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
+ G +Q L RGV+++IATPGRL+D E+G L LV+DEADRMLDMGF P
Sbjct: 107 IGGVSFGDQDAKLTRGVDVLIATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPD 166
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNL 512
I +I + + RQTL ++AT P E++ +
Sbjct: 167 IERICKLVPFTRQTLFFTATMPPEIRRI 194
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
TG+GKT A++LP + + R P L+L PTRELA Q+++
Sbjct: 47 TGTGKTAAFVLPMLTILEKGRA--RARMPRTLILEPTRELAAQVKE 90
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 83.4 bits (197), Expect = 6e-15
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q RGV+++I TPGRL+D L +LVLDEADRMLDMGF P IR
Sbjct: 107 GVSIRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIR 166
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+I++ I RQTL +SAT P + L R
Sbjct: 167 RILKHIPARRQTLFFSATMPAPIGVLAR 194
Score = 43.2 bits (97), Expect = 0.008
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A++LP + + ++P RG ALV+ PTRELA QI + D + +
Sbjct: 47 TGSGKTAAFLLPILHQLIDRP---RGTTR-ALVITPTRELAAQILEDLNDLAVHTPISAA 102
Query: 244 CVFG 255
VFG
Sbjct: 103 AVFG 106
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 83.4 bits (197), Expect = 6e-15
Identities = 37/90 (41%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G Q + + +GV++++A PGRL+D +G+ +L R LVLDEADRMLDMGF
Sbjct: 112 CIFGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFI 171
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
++K++ ++ RQ L++SAT+ K++ +L
Sbjct: 172 HDVKKVLARLPAKRQNLLFSATFSKDITDL 201
Score = 36.3 bits (80), Expect = 0.89
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHI--NNQPPIRRGDGPI---ALVLAPTRELAQQIQQVAADFGHTS 228
TG+GKT + LP + + P + GP LVL PTRELA Q+ +
Sbjct: 47 TGTGKTGGFALPILERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDL 106
Query: 229 YVRNTCVFG 255
+ C+FG
Sbjct: 107 NFISACIFG 115
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 83.4 bits (197), Expect = 6e-15
Identities = 36/86 (41%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + Q R LE+G++I++ATPGRL+D + +G +L + VLDE D+MLDMG ++
Sbjct: 112 GVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVK 171
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
+II + +RQ +++SAT P E++ L
Sbjct: 172 RIITYLPRERQNMLFSATMPVEIEKL 197
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVRN 240
TG+GKT A+ +P + + + +G I ALVLAPTRELA QI + +G +R
Sbjct: 47 TGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRT 106
Query: 241 TCVFG 255
+FG
Sbjct: 107 LVIFG 111
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 83.4 bits (197), Expect = 6e-15
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G QA+ L++G +I++ATPGRL++ + +L +LVLDEADRMLDMGF I+
Sbjct: 111 GMKMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQ 170
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
KI++ + RQ L++SAT+ VK L
Sbjct: 171 KILQAVNKKRQNLLFSATFSTAVKKL 196
Score = 41.5 bits (93), Expect = 0.024
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TG+GKT A+ LP + ++ +P + AL+L PTRELA Q+
Sbjct: 47 TGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQV 90
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 83.4 bits (197), Expect = 6e-15
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 428
V G Q R+L+R +IV+ATPGRL+D + + L + +++DEADRMLDMGF P
Sbjct: 107 VGGVDFIRQERNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPD 166
Query: 429 IRKIIEQIRPDRQTLMWSATWPKEVKNL 512
I I+ Q+ RQ+L++SAT P ++ L
Sbjct: 167 INTIVRQLPKGRQSLLFSATCPPRIQEL 194
Score = 43.2 bits (97), Expect = 0.008
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG---HTSYV 234
TG+GKT ++LP + I R G ALVL+PTRELA QI Q A D+ HT+ V
Sbjct: 47 TGTGKTGGFLLPVLHKIAEGR--RHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAV 104
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/86 (26%), Positives = 44/86 (51%)
Frame = +2
Query: 497 RSEELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGA 676
R +ELA + D + + + + ++H + + + +K L +L E G+S+
Sbjct: 190 RIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKVLDE-GKSET--G 246
Query: 677 KTIIFVETKRKAENISRNIRRYGWPA 754
+ IIF TKR AE++S + G+P+
Sbjct: 247 QVIIFTRTKRSAEDLSIALNDAGYPS 272
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 83.4 bits (197), Expect = 6e-15
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q + L GV++++ATPGRL+D ++ + LVLDEADRMLDMGF I+
Sbjct: 110 GVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIK 169
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
KI+ + RQ LM+SAT+ E++ L +
Sbjct: 170 KILAMLPAKRQNLMFSATFSDEIRELAK 197
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G +R+
Sbjct: 47 TGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYGKYLPLRSA 105
Query: 244 CVFG 255
VFG
Sbjct: 106 VVFG 109
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 83.4 bits (197), Expect = 6e-15
Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDL--ERGVEIVIATPGRLIDFLEKGTTN---LQRCTYLVLDEADRML 407
+ ++G + +D+ + EI+IATPGRL+D +++ L L+LDEADRML
Sbjct: 418 IAIYGGVDANEQKDILGQEHNEIIIATPGRLVDLIQRSKEVVGLLGGVGMLILDEADRML 477
Query: 408 DMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWET 533
+GF Q++KI EQIRPDRQTLM+SAT+P+ +++ + W T
Sbjct: 478 QLGFGDQLQKISEQIRPDRQTLMFSATFPQTMQDAAK-KWLT 518
Score = 35.5 bits (78), Expect = 1.5
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 24/88 (27%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINN---QPPIRRGD---------------------GPIALVLAP 171
TGSGKTL Y+LPAI +I Q IRR GP+ L++ P
Sbjct: 335 TGSGKTLGYLLPAIPNILEHLRQRKIRRQQMTMQEKLENKKKSKLLKNTNMGPMVLIIVP 394
Query: 172 TRELAQQIQQVAADFGHTSYVRNTCVFG 255
TRELA+Q++ + + ++G
Sbjct: 395 TRELAKQVESSCKPLRSKFNIHSIAIYG 422
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 83.0 bits (196), Expect = 8e-15
Identities = 38/91 (41%), Positives = 55/91 (60%)
Frame = +3
Query: 240 HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
H G EQ R+LE+G EI++ T GR+ID +E+G+ L Y +LDEAD ML+MGF
Sbjct: 147 HTVYGGVSIAEQLRNLEQGGEIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGF 206
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
I I D + LM+SAT P+++ ++
Sbjct: 207 VEDIESIFSHANKDARVLMFSATMPRQILSI 237
Score = 36.3 bits (80), Expect = 0.89
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
+ TG+GKT A+ LP I + + P P ALVL PTRELA Q+
Sbjct: 90 KARTGTGKTAAFGLPLIQELGS--PCEH---PGALVLVPTRELAAQV 131
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 83.0 bits (196), Expect = 8e-15
Identities = 38/91 (41%), Positives = 57/91 (62%)
Frame = +3
Query: 246 CVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
CV G R + + LERG IV+ TPGRL D +E+G ++ + +VLDEAD MLD GF
Sbjct: 108 CVGGMDPRAERKALERGCHIVVGTPGRLRDHIERGALDMSQLKAVVLDEADEMLDFGFRE 167
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ I++ R+TL++SAT P+ + ++ R
Sbjct: 168 DLEYILDAAPASRRTLLFSATVPRAIADIAR 198
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +1
Query: 10 SSRLADSYVWKEFSWRTTTGSGKTLAY-ILPAIVHINNQPPIRRGDGPIALVLAPTRELA 186
S+ +A+ ++ TGSGKT A+ + A + + R D P+AL++APTRELA
Sbjct: 28 SAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMALIVAPTRELA 87
Query: 187 QQIQ-QVAADFGHTSYVRNTCVFGVLLKESKPGTWRG 294
Q+Q ++A +G +CV G+ + + RG
Sbjct: 88 LQVQRELAWLYGEARGQIASCVGGMDPRAERKALERG 124
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 83.0 bits (196), Expect = 8e-15
Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
V V G ++ RD + V+I++ATPGRLIDFL L + L+LDEADRMLDMG
Sbjct: 150 VTVVGGMHYDKQRDQLQNEVVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLDMG 209
Query: 417 FEPQIRKIIEQIRP--DRQTLMWSATWPKEVKNL 512
F P +++II + P DRQTL++SAT+ ++V NL
Sbjct: 210 FIPDVKRIIRKCTPKEDRQTLLFSATFNQDVLNL 243
Score = 39.9 bits (89), Expect = 0.072
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTSY 231
TG+GKT A+++ AI + P R P L LAPTRELA QI + A HT +
Sbjct: 88 TGTGKTAAFLITAIQTMLETPIEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAHTGH 147
Query: 232 VRNTCVFGV 258
T V G+
Sbjct: 148 KVVTVVGGM 156
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 83.0 bits (196), Expect = 8e-15
Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 VCVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V V+G +EQAR++ RG +IV+ATPGR+ D + + ++ + +Y VLDEAD ML+MGF
Sbjct: 103 VAVYGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGF 162
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
I I+ D+ T ++SAT P+EV + +
Sbjct: 163 YEDITNILADTPEDKLTWLFSATMPREVARIAK 195
Score = 34.7 bits (76), Expect = 2.7
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYVRN 240
TG+GKT A+ P + +I+ +G L++APTREL QI ++ H VR
Sbjct: 48 TGTGKTAAFGFPLLQNIDASSKTTQG-----LIIAPTRELCLQITNEMKLYAKHIKGVRV 102
Query: 241 TCVFG 255
V+G
Sbjct: 103 VAVYG 107
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 83.0 bits (196), Expect = 8e-15
Identities = 41/81 (50%), Positives = 53/81 (65%)
Frame = +3
Query: 210 RFWTHILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 389
+F ++ C V G QA +L RGVEIVI TPGRL D LEK T L +C Y++LD
Sbjct: 796 KFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILD 855
Query: 390 EADRMLDMGFEPQIRKIIEQI 452
EADRM+DMGFE + I+++I
Sbjct: 856 EADRMMDMGFEDTVHYILDKI 876
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 234
TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI + F
Sbjct: 744 TGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSC 803
Query: 235 RNTCVFG 255
R V G
Sbjct: 804 RTVAVVG 810
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 82.6 bits (195), Expect = 1e-14
Identities = 36/80 (45%), Positives = 55/80 (68%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q + L G ++++ATPGRL+D L L R LVLDEADRML +GF ++ +++E +
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEAL 187
Query: 453 RPDRQTLMWSATWPKEVKNL 512
+QTL++SAT+P+EV+ L
Sbjct: 188 PAKKQTLLYSATFPEEVRAL 207
Score = 40.3 bits (90), Expect = 0.054
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQI 195
TGSGKT A+ +P + + + G + LVL PTRELAQQ+
Sbjct: 55 TGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQV 99
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +3
Query: 240 HVCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
H ++G + Q DL G EIV+AT GRL+D +++ +L + +VLDEADRMLDMG
Sbjct: 136 HTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMG 195
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
F IRKI++ + RQTL++SAT+ ++ L
Sbjct: 196 FIDDIRKIMQMLPKQRQTLLFSATFSAPIRKL 227
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDG--PIA-LVLAPTRELAQQIQQVAADFGHTSYV 234
TG+GKT A++LP++ + P+ LVL PTRELA QI Q + +
Sbjct: 75 TGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPL 134
Query: 235 RNTCVFG 255
R+T +FG
Sbjct: 135 RHTVLFG 141
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 82.6 bits (195), Expect = 1e-14
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 246 CVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
CV+G P +Q L RGV+IV+ TPGR++D + + +L ++VLDEAD+ML++GFE
Sbjct: 132 CVYGGTPIGQQESKLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFE 191
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ I+ RQT ++SAT P+ VK + +
Sbjct: 192 EDVEAILHDCPAGRQTFLFSATMPQWVKQITK 223
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHI--NNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHT 225
R TG+GKTLA+ LP I + N + RG P +VLAPTRELA+Q++ F
Sbjct: 68 RARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEI--FITA 125
Query: 226 SYVRNTCVFG 255
+ CV+G
Sbjct: 126 PTLDTACVYG 135
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/88 (43%), Positives = 53/88 (60%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q L +G ++V+ TPGRL+D ++G L + LVLDEAD MLD+GF P I
Sbjct: 125 GRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIE 184
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+I+ Q RQ +++SAT P + L R
Sbjct: 185 RILRQTPDTRQAMLFSATMPDPIITLAR 212
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TG GKT A+ +P + + P AL++ PTREL Q+
Sbjct: 56 TGMGKTYAFGVPLLQRVTTDTEKELSGIPRALIVVPTRELCLQV 99
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +3
Query: 285 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 464
L +GV IV TPGR+ D + GT + + +LVLDEADRMLDMGF Q+ +I++ + +R
Sbjct: 118 LNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKER 177
Query: 465 QTLMWSATWPKEVKNLLR 518
TL++SAT P E+ N+ +
Sbjct: 178 ITLLFSATMPPEIHNICK 195
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 7/95 (7%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G REQ L++G +IVIATPGRL DFLE+ +L+ +VLDEAD+MLDMGFEPQIR
Sbjct: 84 GEGAREQRGLLKKGCDIVIATPGRLKDFLERRCLSLKYVRVMVLDEADKMLDMGFEPQIR 143
Query: 435 KIIEQI-------RPDRQTLMWSATWPKEVKNLLR 518
++ + +RQTLM+SAT+ V+ + +
Sbjct: 144 DLVYKFDMPGNGPNGNRQTLMFSATFGTGVQAMAK 178
>UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 697
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 GAPKREQARDLERGV-EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 431
G K Q LE+ +I+I+TPGRLI+ +E G +L T LVLDEAD+ML G PQ+
Sbjct: 328 GISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKMLSKGLIPQL 387
Query: 432 RKIIEQIRPDRQTLMWSATWPKEVKNL 512
++I QIRPD Q +++SAT+P +K +
Sbjct: 388 KQIRGQIRPDSQNILFSATFPDSLKEV 414
Score = 33.9 bits (74), Expect = 4.7
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Frame = +1
Query: 67 GSGKTLAYILPAIVH------------INNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 210
GSGKTL Y+ P I H I + ++ G + LVL PTREL Q+
Sbjct: 253 GSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLVPTRELGLQVHSNTL 312
Query: 211 DFGHTSYVRNTCVFGVLLK 267
++ + ++G + K
Sbjct: 313 IITQLFGIKTSVIYGGISK 331
Score = 33.1 bits (72), Expect = 8.3
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 503 EELAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAK 679
+E+++D++ D I++ IGS +L ++I Q + H+K L LL E Q +E K
Sbjct: 412 KEVSKDWIKDPSIRLRIGSSELPKLNHIQQDAQLIAHHKKPRALIKLLSE-PQFKEK-KK 469
Query: 680 TIIFVETKRKAENIS 724
TI+F ++ + IS
Sbjct: 470 TIVFFNKIKELKRIS 484
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 82.2 bits (194), Expect = 1e-14
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q R+L RGV+IV+ TPGR++D + + T L+ +Y+VLDEAD ML+MGF + +I++ +
Sbjct: 114 QIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSV 173
Query: 453 RPDRQTLMWSATWPKEVKNLLR 518
+++ L++SAT P + L +
Sbjct: 174 STEKRMLLFSATLPDSIMKLAK 195
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 81.8 bits (193), Expect = 2e-14
Identities = 32/76 (42%), Positives = 59/76 (77%)
Frame = +3
Query: 288 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 467
+RG++I++ATPGRL+D+++ G +L + +VLDEAD M+DMGF +++I+++ + ++Q
Sbjct: 123 KRGLDIIVATPGRLLDYIKSGKLSLSQVDTVVLDEADLMVDMGFIDDVKEILKRTKEEKQ 182
Query: 468 TLMWSATWPKEVKNLL 515
+++SAT PK + NL+
Sbjct: 183 VMLFSATMPKAIMNLV 198
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/91 (41%), Positives = 57/91 (62%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
V V G P Q L+RG++++IATPGRL+D +++ +L VLDEAD M D+GF
Sbjct: 252 VVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVLDEADHMADLGFL 311
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLL 515
P +R I+E +P Q + +SAT + V+ L+
Sbjct: 312 PNVRAILEGTKPGGQRMFFSATLDRGVEALV 342
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/85 (36%), Positives = 40/85 (47%)
Frame = +1
Query: 1 AHSSSRLADSYVWKEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 180
A S L D ++ R TGSGKTL + LP + + Q R P LVL PTRE
Sbjct: 171 AIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRE 230
Query: 181 LAQQIQQVAADFGHTSYVRNTCVFG 255
LA Q+ G + +R + V G
Sbjct: 231 LAMQVADALRPLGDSLDLRLSVVVG 255
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +3
Query: 249 VWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
V+G AP Q ++L++ +V+ TPGR+ID +EKGT + + YLV+DEAD M +MGF
Sbjct: 106 VYGKAPFYHQEKELKQKTHVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVD 165
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
QI II+ + R T++ SAT P ++ L
Sbjct: 166 QIETIIKDLSKKRVTMLLSATMPSAIETL 194
Score = 39.9 bits (89), Expect = 0.072
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ ++ TGSGKT A+ +P ++ + P ALVL PTRELA Q+++ + G
Sbjct: 42 KDIIVKSQTGSGKTAAFAIPICQLVDWDE-----NKPQALVLVPTRELAIQVKEDMFNIG 96
Query: 220 HTSYVRNTCVFG 255
++ V+G
Sbjct: 97 RFKRLKVAAVYG 108
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
GA R Q R L++ ++++ TPGR++D L +GT +L +LVLDEAD ML MGF I
Sbjct: 111 GADMRNQLRALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDID 170
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNL 512
I+E D+QT ++SAT P ++K +
Sbjct: 171 WILEHTPKDKQTALFSATMPHQIKRI 196
Score = 36.7 bits (81), Expect = 0.67
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
TG+GKT A+ LP + I+ + P ALVL PTRELA Q+ +
Sbjct: 51 TGTGKTAAFSLPLLSRIDTTK-----NKPQALVLCPTRELAIQVAE 91
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 81.8 bits (193), Expect = 2e-14
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLID-FLEKGTTNLQRCTYLVLDEADRMLDMGFEP 425
V G + Q +L + ++VIATPGRLID L L L+LDEADR+LDMGF+
Sbjct: 296 VGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKD 355
Query: 426 QIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWETTFR 542
+I KI+E +RQT+++SAT EVK L +++ + R
Sbjct: 356 EINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIR 394
Score = 40.3 bits (90), Expect = 0.054
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +1
Query: 40 KEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
K+ +TGSGKT A++LP + + + R L+L PTRELA Q Q V +
Sbjct: 228 KDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIR--VLILLPTRELALQCQSVMENLA 285
Query: 220 HTSYVRNTCVFGVLLKESK 276
S + + + G L +++
Sbjct: 286 QFSNITSCLIVGGLSNKAQ 304
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G +Q + RG I++ TPGR +D +++G N + +Y VLDEAD MLDMGF I+
Sbjct: 106 GVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIK 165
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
KII + +RQ+ ++SAT P E+ L +
Sbjct: 166 KIINVLPVERQSFLFSATIPSEIIELAK 193
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 234
R+ TGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+ G S +
Sbjct: 45 RSKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEALGKRSGI 98
Query: 235 RNTCVFG 255
R V+G
Sbjct: 99 RTVVVYG 105
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 273 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
Q L RGV +++ATPGRLID +E+GT +L + +VLDEAD ML+MGF I +I+ +
Sbjct: 114 QIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHV 173
Query: 453 RPDRQTLMWSATWPKEVKNLLR 518
RQT+++SAT K + + R
Sbjct: 174 PERRQTMLFSATVSKPILRIAR 195
Score = 36.3 bits (80), Expect = 0.89
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TG+GKT A+ +P + ++ + P AL++ PTREL Q+ + G V+
Sbjct: 50 TGTGKTAAFAIPVLENLEAERV------PQALIICPTRELCLQVSEEIKRIGKYMKVKVL 103
Query: 244 CVFG 255
V+G
Sbjct: 104 AVYG 107
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 81.8 bits (193), Expect = 2e-14
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 VCVWGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
V ++G + + Q R L +G +IV+ TPGRL+D L++GT +L + + LVLDEAD ML MGF
Sbjct: 107 VALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 166
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
+ I+ QI QT ++SAT P+ ++ + R
Sbjct: 167 IEDVETIMAQIPEGHQTALFSATMPEAIRRITR 199
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 240
TGSGKT A+ LP + +++ P ++ P LVLAPTRELA Q+ + DF H V
Sbjct: 52 TGSGKTAAFSLPLLQNLD--PELK---APQILVLAPTRELAVQVAEAMTDFSKHMRGVNV 106
Query: 241 TCVFG 255
++G
Sbjct: 107 VALYG 111
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/93 (41%), Positives = 59/93 (63%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
+ + G +QA L++ ++IATPGR+ D L LQ +VLDEADRMLDMGF
Sbjct: 133 LAIGGTTGSKQANQLKKNPRLIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFA 192
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRI 521
PQ+R I +R RQT+M+SA++ V+++ ++
Sbjct: 193 PQLRTIQSTLRGPRQTMMFSASFGSNVESIAQL 225
Score = 39.5 bits (88), Expect = 0.095
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 204
TGSGKTLA+ L + + +P R L+L P+RE+AQQI +V
Sbjct: 79 TGSGKTLAFALSLLTTLQKKPEAR------GLILVPSREMAQQIYKV 119
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/88 (42%), Positives = 58/88 (65%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G R Q L+R V++V+ TPGR++D + +GT + LVLDEAD ML+MGF I
Sbjct: 158 GTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIE 217
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLR 518
II+Q+ ++Q +++SAT P E++N+ +
Sbjct: 218 WIIDQLPKNKQMVLFSATMPNEIRNIAK 245
Score = 33.5 bits (73), Expect = 6.2
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 201
TG+GKT A+ LP I + + + LV+ PTRELA Q+ +
Sbjct: 97 TGTGKTAAFALPLIEKLADNKELNAK----VLVMTPTRELATQVAE 138
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,666,090
Number of Sequences: 1657284
Number of extensions: 17663003
Number of successful extensions: 53255
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 48639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52082
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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