Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0110
(795 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 155 5e-38
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 9e-15
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 76 3e-14
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 76 4e-14
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 75 7e-14
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 72 6e-13
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 72 6e-13
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 71 1e-12
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 70 3e-12
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 64 9e-11
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 64 9e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 62 7e-10
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 54 1e-07
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 54 1e-07
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 52 4e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 7e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 46 5e-05
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 43 3e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 39 0.004
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 37 0.022
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 36 0.038
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 35 0.087
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.12
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.27
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.47
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 29 3.3
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.3
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_25806| Best HMM Match : DUF159 (HMM E-Value=0.37) 28 7.6
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 28 7.6
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 155 bits (375), Expect = 5e-38
Identities = 73/90 (81%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 CVWG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G APK Q R+LERGVEI IATPGRLID LE TNL+RCTYLVLDEADRMLDMGFE
Sbjct: 165 CIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFE 224
Query: 423 PQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
PQIR II+QIRPDRQTLMWSATWPKEV+ L
Sbjct: 225 PQIRTIIDQIRPDRQTLMWSATWPKEVQGL 254
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA D+L DY+ I +GSL L+ANH ILQIVD+C++HEKE+ + + G +T+I
Sbjct: 254 LAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHNVGSFIG--GIVILSSLQTLI 311
Query: 689 FVETKRKAENISRNIRRYG 745
F ETKR+A+ ++R +R G
Sbjct: 312 FTETKRRADELTRKLRSDG 330
Score = 78.2 bits (184), Expect = 7e-15
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 88 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 255
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++G
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYG 168
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 110 bits (264), Expect = 1e-24
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 12/104 (11%)
Frame = +3
Query: 243 VCVWGAPK-REQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLD 410
VCV+G EQ +L+RG EI++ TPGR+ID L TN QRCTYLVLDEADRM D
Sbjct: 176 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFD 235
Query: 411 MGFEPQIRK--------IIEQIRPDRQTLMWSATWPKEVKNLLR 518
MGFEPQI K II+ IRPDRQT+M+SAT+P++++ L R
Sbjct: 236 MGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALAR 279
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +1
Query: 76 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 255
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 2 PIQAQGWPIAMSGKNLVGV---PQRVPAKRWPTSCQPLC 109
PIQAQ P+ MSG++++ + P R A + C+ C
Sbjct: 130 PIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 103 bits (247), Expect = 2e-22
Identities = 48/94 (51%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
VC G Q R L+ G +++ TPGRL DF+EKG +L+ +L+LDEADRMLDMGFE
Sbjct: 821 VCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFE 880
Query: 423 PQIRKIIEQI----RPDRQTLMWSATWPKEVKNL 512
P IR+I+E + + +RQTLM+SAT+P+E++ L
Sbjct: 881 PAIRRIVESMGMPDKSERQTLMFSATFPEEIQRL 914
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A++LP + + N P A+ +APTRELA QI A F H +
Sbjct: 757 TGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTM 816
Query: 232 VRNTCVFG 255
+R +G
Sbjct: 817 LRPVVCYG 824
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/97 (27%), Positives = 51/97 (52%)
Frame = +2
Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
+ LA D+L DY+ + +G + +I Q V ++EK ++L +L + G +T
Sbjct: 912 QRLAGDFLNDYLFLTVGRVG-GTTSDIEQTVIEVTDNEKRDRLTQILGDAGTD-----RT 965
Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
++FVE+KR A+ ++ + G+P I +L + E
Sbjct: 966 LVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQERE 1002
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 103 bits (246), Expect = 2e-22
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Frame = +3
Query: 228 LCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 407
LC V GA Q R+L+R +++ATPGRL+D +++G L +LVLDEADRML
Sbjct: 953 LCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRML 1012
Query: 408 DMGFEPQIRKIIEQ-IRPD---RQTLMWSATWPKEVKNLLR 518
DMGFEPQIR+I++Q P RQTLM+SAT+PKE++ L R
Sbjct: 1013 DMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLAR 1053
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/95 (31%), Positives = 47/95 (49%)
Frame = +2
Query: 509 LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 688
LA D+L +YI + +G + S + NI Q V E +K + L LL G Q T++
Sbjct: 1051 LARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFLLDLLNASGPQQ----LTLV 1105
Query: 689 FVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
FVETK+ A+ + + + G+ I + R E
Sbjct: 1106 FVETKKGADALEMFLAKDGYYCTSIHGDRSQRERE 1140
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 88.2 bits (209), Expect = 7e-18
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
VC G QA LERG ++ TPGRL DF+ + L +L+LDEADRMLD+GF
Sbjct: 585 VCYGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFG 644
Query: 423 PQIRKIIEQ----IRPDRQTLMWSATWPKEVKNL 512
P I K+IE+ + RQTLM+SAT+P E+++L
Sbjct: 645 PDIHKLIEESNMTAKESRQTLMFSATFPDEIQHL 678
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 240
TGSGKT AY+LP + + Q P+AL +APTRELA+QI A F HT
Sbjct: 525 TGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVC 584
Query: 241 TCVFGV 258
C GV
Sbjct: 585 VCYGGV 590
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/96 (38%), Positives = 53/96 (55%)
Frame = +3
Query: 216 WTHILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 395
+ H+ C H C+ G RE LE GV +V+ TPGR+ D + +G N + VLDEA
Sbjct: 185 YMHVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEA 242
Query: 396 DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEV 503
D ML GF+ QI + ++ Q ++ SAT P +V
Sbjct: 243 DEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDV 278
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVR- 237
+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V+
Sbjct: 131 SGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKC 190
Query: 238 NTCVFGVLLKESK 276
+ C+ G ++E +
Sbjct: 191 HACIGGTNVREDR 203
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 77.8 bits (183), Expect = 9e-15
Identities = 38/95 (40%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGF 419
+ + G ++ +A L++GV ++IATPGRL+D L+ L + LV+DEADR+L++GF
Sbjct: 677 IIMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGF 736
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRIT 524
E ++R+II + RQT+++SAT K V++L +++
Sbjct: 737 EEEMRQIIRILPSKRQTVLFSATQTKNVEDLAKLS 771
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD-FGHTSYVRN 240
TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D H ++
Sbjct: 618 TGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYG 676
Query: 241 TCVFGV 258
+ GV
Sbjct: 677 IIMGGV 682
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 76.2 bits (179), Expect = 3e-14
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Frame = +3
Query: 264 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT---YLVLDEADRMLDMGFEPQIR 434
K EQ R ++ IV+ TPGRL+ +++ T N CT LVLDEADR+LDMGF P +
Sbjct: 163 KNEQKRIMK--TNIVVCTPGRLLQHMDE-TPNFD-CTSLQILVLDEADRILDMGFAPTLN 218
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKNLLRITWET 533
IIE + +RQTL++SAT + VK+L R++ ++
Sbjct: 219 AIIENLPSERQTLLYSATQTRSVKDLARLSLQS 251
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 222
TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+
Sbjct: 96 TGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGN 147
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 75.8 bits (178), Expect = 4e-14
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = +3
Query: 246 CVWGA-PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 422
C++G P Q + G+++++ TPGR++DF+ +GT +L + ++VLDE DRMLDMGF
Sbjct: 178 CIYGGMPYEPQENAINSGLDVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFA 237
Query: 423 PQIRKII----EQIRPDR-QTLMWSATWP 494
+ +++ + R D+ QTL++SAT P
Sbjct: 238 ESVEEVLAASYAEDREDKPQTLLFSATLP 266
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQI 195
TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+
Sbjct: 119 TGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 75.8 bits (178), Expect = 4e-14
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
G K EQ++ L+ G EIV+ATPGRLID ++ TNL R TYLV DEADRM DMGF
Sbjct: 627 GGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF 681
Score = 74.5 bits (175), Expect = 9e-14
Identities = 35/64 (54%), Positives = 43/64 (67%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 563 TGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVV 622
Query: 244 CVFG 255
VFG
Sbjct: 623 AVFG 626
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 74.9 bits (176), Expect = 7e-14
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G P Q L G ++V+ATPGRL+D L + TYLV+DE DRML MG E Q+R
Sbjct: 204 GVPVSTQTIALREGADVVVATPGRLLD--------LYKITYLVMDEPDRMLGMGMEEQLR 255
Query: 435 KII---EQIRPDRQTLMWSATWPKEVKNLLR 518
KI+ RQTL+WSAT P+ ++ L R
Sbjct: 256 KIVGLATGTSRARQTLLWSATLPESLERLAR 286
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 195
TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 118 TGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 71.7 bits (168), Expect = 6e-13
Identities = 28/71 (39%), Positives = 52/71 (73%)
Frame = +3
Query: 297 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 476
V +++ATPGR++D ++K ++ +C LV+DEAD++L M F+ + +II+ + +RQ L+
Sbjct: 173 VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILL 232
Query: 477 WSATWPKEVKN 509
+SAT+P V++
Sbjct: 233 FSATFPISVRD 243
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
R G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 71.7 bits (168), Expect = 6e-13
Identities = 28/71 (39%), Positives = 52/71 (73%)
Frame = +3
Query: 297 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 476
V +++ATPGR++D ++K ++ +C LV+DEAD++L M F+ + +II+ + +RQ L+
Sbjct: 173 VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILL 232
Query: 477 WSATWPKEVKN 509
+SAT+P V++
Sbjct: 233 FSATFPISVRD 243
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 219
R G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 70.9 bits (166), Expect = 1e-12
Identities = 28/73 (38%), Positives = 51/73 (69%)
Frame = +3
Query: 288 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 467
E GV++++ATPGR+++ + + +L V+DE D ML +GFE Q+++I+E++ RQ
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 468 TLMWSATWPKEVK 506
T+++SAT P ++
Sbjct: 313 TMLFSATIPPSIE 325
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 69.7 bits (163), Expect = 3e-12
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRMLDMGF 419
V V G +QA L +VIATPGRL D ++ T NL++ +LVLDEADR+LD F
Sbjct: 108 VIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSF 167
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWETTF 539
++ I + + RQTL++SAT + L +++ F
Sbjct: 168 GDDLKVIFDAVPEKRQTLLFSATLTDTMGELQKMSGSQPF 207
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 53 TGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEA 107
Query: 244 CVFGVL 261
+ G L
Sbjct: 108 VIVGGL 113
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +3
Query: 240 HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 419
H C+ G E R L+ G IV TPGR+ D + + + LVLDEAD ML+ GF
Sbjct: 97 HACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGF 156
Query: 420 EPQIRKIIEQIRPDRQTLMWSATWPKEV 503
+ QI + + P Q ++ SAT P E+
Sbjct: 157 KEQIYDVYRYLPPATQVVLLSATLPHEI 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 240
+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G + S +
Sbjct: 43 SGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSVQCH 97
Query: 241 TCVFGVLLKE 270
C+ G + E
Sbjct: 98 ACIGGTNIGE 107
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 357 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++N +
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 66
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 357 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++N +
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 66
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTSY 231
TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 147 TGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLG 206
Query: 232 VRNTCVFG 255
+R V G
Sbjct: 207 IRTVSVIG 214
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGR-LIDFLEKGTTNLQRC----TYLVLDEADRML 407
V + G PK E+ D ++G +I P R L +E+ R T V+ ADRM+
Sbjct: 161 VWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADRMI 220
Query: 408 DMGFEPQIRKIIEQI 452
DMGFEP+++KI+E +
Sbjct: 221 DMGFEPEVQKILEHL 235
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +3
Query: 243 VCVWGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMG 416
V V G QA L + I+IATPGRLID LE KG +L+ YLV+DEADR+L+M
Sbjct: 65 VIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKG-FSLRTLKYLVMDEADRILNMD 123
Query: 417 FEPQ 428
FE +
Sbjct: 124 FEKE 127
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 10 TGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKCA 64
Query: 244 CVFG 255
+ G
Sbjct: 65 VIVG 68
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G E+ + + I + TPGR+ +E+ + +LDEAD++LD F+ QI
Sbjct: 118 GGISLEEDKKALKSCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQIN 177
Query: 435 KIIEQIRPDRQTLMWSATWPKEVKN-LLRITWETTF 539
I + ++Q + +SAT+P+ + N L + E TF
Sbjct: 178 WIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTF 213
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG--HTSYVR 237
+G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G +
Sbjct: 59 SGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLAC 113
Query: 238 NTCVFGVLLKESK 276
+ G+ L+E K
Sbjct: 114 KVFIGGISLEEDK 126
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
MGFEP+I+KI+ IRPDRQT+M SATWP V+ +
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRM 34
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +3
Query: 378 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 512
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ ++K L
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKAL 51
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 GAPKREQARD-LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 431
G K++ RD LE V++++ATPG L+ + +K T+LV+DEAD M D F+
Sbjct: 491 GGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLT 550
Query: 432 RKIIEQI 452
+I+ I
Sbjct: 551 MEILHTI 557
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHTS 228
TGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H +
Sbjct: 424 TGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHA 482
Query: 229 YVRNTCVFG 255
R+ + G
Sbjct: 483 RFRSVGLIG 491
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +3
Query: 303 IVIATPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDM-GFEPQIRKIIEQIRPDRQTLM 476
I+I TPG L+D++ K ++ + VLDEAD M+ + G + Q +I + + D Q L+
Sbjct: 224 IIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLL 283
Query: 477 WSATWPKEV 503
+SAT+ ++V
Sbjct: 284 FSATYDEDV 292
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 231
++ +G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202
Query: 232 VR 237
++
Sbjct: 203 IK 204
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 44.8 bits (101), Expect = 8e-05
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 222 HILCS*HVCVWGAPKREQARDLERGVEIVIATPGRLIDFLEKG 350
H+ C H C+ G RE LE GV +V+ TPGR+ D + +G
Sbjct: 2 HVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 297 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
V+IV TPG+L DF+ +L + + +LDEAD +L G I KI +I
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 243
TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + ++++
Sbjct: 327 TGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKSS 383
Query: 244 CVFG 255
+ G
Sbjct: 384 VILG 387
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 294 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 401
G + V+ATPGR + + + L Y+V DEADR
Sbjct: 387 GGDSVVATPGRFLHVVMEMELKLSSVEYVVFDEADR 422
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 297 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
V +V+ + EK +N+Q YLV+DEADRM++ G ++ I+E I
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
Score = 35.1 bits (77), Expect = 0.066
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 14/59 (23%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 198
TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 177 TGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 249 VWGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 359
V G +Q R L++ EIV+ATPGRL + + + T+
Sbjct: 253 VGGMAAPKQQRLLKQRPEIVVATPGRLWELISQVFTH 289
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 303 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 410
IV+ TPGR++ + T NL+ + +LDE D+ML+
Sbjct: 170 IVVGTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 575 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 754
H + Q +++EK KL LL + +Q IIFV++ ++ +S + + +PA
Sbjct: 308 HGLQQYYVKLKDNEKNRKLFDLLDLLEFNQ-----VIIFVKSVQRCTALSHLLLKQNFPA 362
Query: 755 VCI 763
+CI
Sbjct: 363 ICI 365
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 303 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 410
IV+ TPGR++ + T NL+ + +LDE D+ML+
Sbjct: 170 IVVGTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 342 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 452
E+ +N+Q YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +3
Query: 300 EIVIATPGRLIDFL--EKGTTNLQRCTYLVLDEADRMLDM---GFEPQIRKIIEQI-RPD 461
+I++ TP RL+ L E L +L+LDEAD++ + GF QI I + +PD
Sbjct: 258 DILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPD 317
Query: 462 RQTLMWSAT 488
++SAT
Sbjct: 318 IHRGLFSAT 326
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 35.9 bits (79), Expect = 0.038
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 148 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGVLLKE 270
P ALVL+PTRELA QIQ+V G + S + C+ G + E
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGE 45
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 240 HVCVWGAPKREQARDLERGVEIVIATPGRL 329
H C+ G E R L+ G IV TPGR+
Sbjct: 35 HACIGGTNIGEDIRKLDYGQHIVSGTPGRV 64
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 34.7 bits (76), Expect = 0.087
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +3
Query: 255 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 434
G + ++ L G E+++ATP + L++ T+L R ++V D+AD ML F +I+
Sbjct: 301 GGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDAD-MLAEYFTAEIK 359
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 67 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD 213
GSGK LAY+LP I I + +GP+ L+L + ++ V D
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCED 285
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 55 RTTTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 231
++ TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254
Query: 232 V 234
V
Sbjct: 255 V 255
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 303 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 407
IVI TP RL + +++ QR +V+DE D+ L
Sbjct: 280 IVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 282 DLERGVEIVIATPGRLIDFL 341
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 64 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 192
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 378 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 467
LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 557 LQLSANHN-ILQIVDICQEHEKENKLNVLLQEI-GQSQEPGAKTIIFVETKRKAENISRN 730
L L AN + L IC + ++ N L + + + G SQ G + KRK
Sbjct: 423 LSLDANFSPYLADACICFQAKRSNTLYLSVSQADGSSQLRGKNDVAVRPAKRKVIVGDNT 482
Query: 731 IRRYGWPAVCIMAIKLTRRDE 793
+ YG P V + K RR+E
Sbjct: 483 VYNYGAPHVTSTSTKAQRRNE 503
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 411 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLR 518
MGFE I I+ + R+T ++SAT EV+ L+R
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVR 36
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 360 LQRCTYLVLDEADRMLDMGFEPQIRKII 443
LQRC LVLDEA +D + Q++++I
Sbjct: 1219 LQRCKVLVLDEATANVDYRTDRQVQQLI 1246
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 360 LQRCTYLVLDEADRMLDMGFEPQIRKII 443
LQRC LVLDEA +D + Q++++I
Sbjct: 984 LQRCKVLVLDEATANVDYRTDRQVQQLI 1011
>SB_25806| Best HMM Match : DUF159 (HMM E-Value=0.37)
Length = 563
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 417 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKNLLRITWETTFR 542
F+ QI++++ + L +S + +E +NLL+ TW+ R
Sbjct: 123 FDQQIQRLVGDVLLATGFLSYSGPFNQEFRNLLQSTWKKDMR 164
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 324 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 455
R + LEKG + LDEAD+M+D F R+++E I+
Sbjct: 372 RQLRHLEKGKETCDQ----KLDEADKMIDAYFREMQRRLMEDIK 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,092,641
Number of Sequences: 59808
Number of extensions: 567879
Number of successful extensions: 1471
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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