Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0105
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 153 8e-38
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 153 8e-38
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 152 2e-37
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 113 1e-25
07_03_1358 - 25984897-25984997,25985623-25985650 47 1e-05
12_01_0348 - 2662510-2662565,2662634-2662943,2663573-2663734,266... 34 0.056
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 29 2.1
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 2.8
04_04_0288 + 24164671-24165549,24166113-24166496 29 2.8
03_06_0336 - 33220493-33220986,33221077-33221252,33221357-332214... 29 2.8
02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404 29 2.8
12_01_0934 - 9273325-9273807,9273898-9274062,9274155-9274235,927... 28 3.7
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 28 3.7
03_06_0069 - 31449319-31450368 28 3.7
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 28 4.8
02_02_0602 + 12053929-12054081,12054241-12054498,12054611-120547... 28 4.8
01_06_1405 + 37070395-37070484,37070599-37070700,37071403-370714... 28 4.8
08_02_0251 - 14776308-14776495,14777624-14777708,14779125-147791... 27 6.4
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 6.4
11_03_0022 - 9015408-9015467,9015468-9015560,9017326-9017420,901... 27 8.5
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 27 8.5
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 153 bits (371), Expect = 8e-38
Identities = 76/141 (53%), Positives = 98/141 (69%)
Frame = +1
Query: 40 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEGP 219
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR + P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 220 QEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHARI 399
+ I + R G+L + Q KLDYVL L +E+FL RRLQT VFK+G+AKSIHHAR+
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 129
Query: 400 LIRQRHIRVRKQVVQHPMHLL 462
LIRQRHIRV +Q+V P ++
Sbjct: 130 LIRQRHIRVGRQIVNIPSFMV 150
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 153 bits (371), Expect = 8e-38
Identities = 76/141 (53%), Positives = 98/141 (69%)
Frame = +1
Query: 40 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEGP 219
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR + P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 220 QEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHARI 399
+ I + R G+L + Q KLDYVL L +E+FL RRLQT VFK+G+AKSIHHAR+
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 345
Query: 400 LIRQRHIRVRKQVVQHPMHLL 462
LIRQRHIRV +Q+V P ++
Sbjct: 346 LIRQRHIRVGRQIVNIPSFMV 366
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 152 bits (368), Expect = 2e-37
Identities = 76/139 (54%), Positives = 97/139 (69%)
Frame = +1
Query: 46 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEGPQE 225
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR + P+
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 226 IVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHARILI 405
I + R G+L + Q KLDYVL L +E+FL RRLQT VFK+G+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 406 RQRHIRVRKQVVQHPMHLL 462
RQRHIRV +Q+V P ++
Sbjct: 155 RQRHIRVGRQIVNIPSFMV 173
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 113 bits (271), Expect = 1e-25
Identities = 64/127 (50%), Positives = 80/127 (62%)
Frame = +1
Query: 40 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEGP 219
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ L K +PR
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQELLTLDEK------NPRRIFE 63
Query: 220 QEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHARI 399
E + R + R G+L E Q KLDYVL L +E+FL+ RLQT VFK+G KSIHH +
Sbjct: 64 GEALLR-----HMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
Query: 400 LIRQRHI 420
LIRQ HI
Sbjct: 119 LIRQHHI 125
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 40 FSKTYVTPRRPFEKARLDQELKIIGEYG 123
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>12_01_0348 -
2662510-2662565,2662634-2662943,2663573-2663734,
2664072-2664272,2664357-2664541,2665108-2665240
Length = 348
Score = 34.3 bits (75), Expect = 0.056
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 134 SVKYGASNTRSLVSVRSARELLTLEEKDPKRLFEGNALLRLWFVLE 271
S K G RS++ VRS + L+EKD +++GN RL VL+
Sbjct: 302 SAKPGGKERRSVLPVRSEKPNGALDEKDGSMIYKGNLAWRLRLVLK 347
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 RRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLCA-WTLASTWTDCS 501
RRL T + K A+ + A I+Q H+RV + V P L+ TW D S
Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLVTRNMEDFITWVDSS 137
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 319 IEDFLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLCAWTLAST 486
+ED+ E L T F + L KS+H AR H+ +++ + P + AST
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLALQRHHHEPPAAASASELYAST 165
>04_04_0288 + 24164671-24165549,24166113-24166496
Length = 420
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 450 GMLHNLLADTNMPLPDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHII 298
GML N+ D + PD + G L A + + + +Q +L+ +++H I
Sbjct: 38 GMLPNIELDVDSFTPDHDDGFTSTLSDAARNNYAMVSAVQSLLSHESRHDI 88
>03_06_0336 -
33220493-33220986,33221077-33221252,33221357-33221492,
33221731-33221894,33222902-33222969
Length = 345
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 40 FSKT-YVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVC 186
FSK Y+TPR+ E RL ++LKI G N R +R A + K+C
Sbjct: 155 FSKVRYLTPRQFVE--RLSRDLKIQGVVAGENYRFGYRASGDAAELVKLC 202
>02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404
Length = 635
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 128 ATSVKYGASNTRSLVSVRSARELLTLEEKDPKRLFEGNAL 247
AT V + TRSL R AREL TLE ++L G A+
Sbjct: 264 ATQVLETVAGTRSLAWGRLARELTTLEAVTWRKLTVGGAV 303
>12_01_0934 -
9273325-9273807,9273898-9274062,9274155-9274235,
9274347-9274475,9274590-9274661,9274758-9274826,
9275143-9275514,9275590-9275703,9275729-9275848
Length = 534
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 206 RG*GAHEQTLRIRASVYLTRHTSRLLRRPYSPMIFNSWSRRAF 78
RG G + R+R L R+ RLLRR + N W RR++
Sbjct: 117 RGGGGGGRLPRLRYGYILWRYVVRLLRR-VEVRVMNRWVRRSY 158
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 297 RLCAWSED*GLLGASSADAGVQIW 368
R CAWS D LL +S D+ IW
Sbjct: 76 RSCAWSPDGKLLATASFDSTTAIW 99
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 391 HDGWTSPGQI*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYEPET 251
HD +S G + P+SA +P + SDQ H VS+ P Y+ T
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYDVAT 282
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 375 EVHPS-CQNFDPAKAYSCPQASCATSHAFIVRLDSGKHMD 491
E HPS C+N A++++C S + S + I LD +D
Sbjct: 687 ESHPSVCENAPHAESFTCDSPSKSNSFSKISALDKANTID 726
>02_02_0602 +
12053929-12054081,12054241-12054498,12054611-12054712,
12054879-12055034,12055413-12055482,12055782-12055936,
12056011-12056100,12056183-12056254,12056409-12056468
Length = 371
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 318 D*GLLGASSADAGVQIWPGEVHPSCQNFD-PAKAYSCPQASCATSHAFI 461
D GL +S D V++W +F P K YS + AT+H I
Sbjct: 115 DTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLI 163
>01_06_1405 +
37070395-37070484,37070599-37070700,37071403-37071472,
37071772-37071926,37072003-37072092,37072701-37072736
Length = 180
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 318 D*GLLGASSADAGVQIWPGEVHPSCQNFD-PAKAYSCPQASCATSHAFI 461
D GL +S D V++W +F P K YS + AT+H I
Sbjct: 8 DTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLI 56
>08_02_0251 -
14776308-14776495,14777624-14777708,14779125-14779160,
14779930-14780177,14780670-14780901,14781159-14781937,
14781987-14782155
Length = 578
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 151 RAILHACCGDRTLR*SSTLGQDVPFQKDDEVSRTSLKIPTVLC 23
R I+H C + T R LG D DE S S K LC
Sbjct: 265 REIIHCCADETTKRIIEELGDDYYAILADECSDLSYKEQLALC 307
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 260 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 346
FV +W + + M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300
>11_03_0022 -
9015408-9015467,9015468-9015560,9017326-9017420,
9018019-9018079,9018601-9018620,9018743-9018824,
9018919-9019020,9019116-9019532
Length = 309
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 252 RRRALPSNNLLGSFSSRVRSSRADLTDTSERVFD 151
RRR+ PS+ L R R +D +D ER+ D
Sbjct: 59 RRRSKPSDRFLKLLRKRARDYNSDDSDDEERLSD 92
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 336 ASSADAGVQIWPGEVHPSCQNFDPAKAYSCPQASCATSHAFIVRLDSG 479
A+S G W CQ++DPAK Y+ Q H I D+G
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV---HGRIFAADTG 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,503,885
Number of Sequences: 37544
Number of extensions: 301711
Number of successful extensions: 850
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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