Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0105
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 201 1e-51
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 200 2e-51
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 189 4e-48
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 120 3e-27
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 93 4e-19
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 33 0.56
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 33 0.56
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 33 0.56
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 33 0.56
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 33 0.56
BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interactin... 30 3.9
BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interactin... 30 3.9
AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interactin... 30 3.9
AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein pr... 30 3.9
AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein pr... 30 3.9
AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein. 30 3.9
BC024154-1|AAH24154.1| 934|Homo sapiens ATP11A protein protein. 29 6.9
AL356752-2|CAI16579.1| 934|Homo sapiens ATPase, Class VI, type ... 29 6.9
AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type ... 29 6.9
AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type ... 29 6.9
AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type ... 29 6.9
AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens ... 29 6.9
AF083383-1|AAC64084.1| 310|Homo sapiens 38kDa splicing factor p... 29 6.9
AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein. 29 6.9
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 201 bits (490), Expect = 1e-51
Identities = 101/142 (71%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 200 bits (488), Expect = 2e-51
Identities = 100/142 (70%), Positives = 113/142 (79%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRHIRVRKQVV P ++
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIV 149
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 189 bits (461), Expect = 4e-48
Identities = 97/142 (68%), Positives = 109/142 (76%)
Frame = +1
Query: 37 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHPRGEG 216
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRK +
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 217 PQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHAR 396
P+ + LV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 397 ILIRQRHIRVRKQVVQHPMHLL 462
+LIRQRH RVRKQVV P ++
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIV 149
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 120 bits (289), Expect = 3e-27
Identities = 58/69 (84%), Positives = 63/69 (91%)
Frame = +1
Query: 256 LVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQ 435
LVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQ
Sbjct: 20 LVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQ 79
Query: 436 VVQHPMHLL 462
VV P ++
Sbjct: 80 VVNIPSFIV 88
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 212 KDPKRLFEGNALLR 253
+DP+RLFEGNALLR
Sbjct: 5 EDPRRLFEGNALLR 18
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 93.5 bits (222), Expect = 4e-19
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +1
Query: 46 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRK 180
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRK
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRK 46
Score = 36.7 bits (81), Expect = 0.045
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 179 RSARELLTLEEKDPKRLFE 235
++ARELLTL+EKDP+RLFE
Sbjct: 46 KAARELLTLDEKDPRRLFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.56
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 328 FLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLC-AWTLASTWTDCS 501
F RRL T + K +A+ + A + Q H+RV VV P L+ + TW D S
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSS 164
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.56
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 328 FLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLC-AWTLASTWTDCS 501
F RRL T + K +A+ + A + Q H+RV VV P L+ + TW D S
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSS 164
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.56
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 328 FLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLC-AWTLASTWTDCS 501
F RRL T + K +A+ + A + Q H+RV VV P L+ + TW D S
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSS 164
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.56
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 328 FLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLC-AWTLASTWTDCS 501
F RRL T + K +A+ + A + Q H+RV VV P L+ + TW D S
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSS 164
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 33.1 bits (72), Expect = 0.56
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 328 FLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLC-AWTLASTWTDCS 501
F RRL T + K +A+ + A + Q H+RV VV P L+ + TW D S
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSS 164
>BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + + Y
Sbjct: 461 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQM----YKLD 516
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
+R R +++ LG F++R R
Sbjct: 517 CERPGRGRSASSGLGEFNARAR 538
>BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + + Y
Sbjct: 461 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQM----YKLD 516
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
+R R +++ LG F++R R
Sbjct: 517 CERPGRGRSASSGLGEFNARAR 538
>AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interacting
protein 4 protein.
Length = 637
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + + Y
Sbjct: 461 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQM----YKLD 516
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
+R R +++ LG F++R R
Sbjct: 517 CERPGRGRSASSGLGEFNARAR 538
>AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein
protein.
Length = 296
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + + Y
Sbjct: 120 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQM----YKLD 175
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
+R R +++ LG F++R R
Sbjct: 176 CERPGRGRSASSGLGEFNARAR 197
>AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + + Y
Sbjct: 433 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQM----YKLD 488
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
+R R +++ LG F++R R
Sbjct: 489 CERPGRGRSASSGLGEFNARAR 510
>AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein.
Length = 609
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + + Y
Sbjct: 433 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQM----YKLD 488
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
+R R +++ LG F++R R
Sbjct: 489 CERPGRGRSASSGLGEFNARAR 510
>BC024154-1|AAH24154.1| 934|Homo sapiens ATP11A protein protein.
Length = 934
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -2
Query: 408 PDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTNQRR 250
PD+ + +++G+++ F +LRL+ E+LN + HI F L I ++ +RR
Sbjct: 483 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEILSFDSVRRR 533
>AL356752-2|CAI16579.1| 934|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 934
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -2
Query: 408 PDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTNQRR 250
PD+ + +++G+++ F +LRL+ E+LN + HI F L I ++ +RR
Sbjct: 483 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEILSFDSVRRR 533
>AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -2
Query: 408 PDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTNQRR 250
PD+ + +++G+++ F +LRL+ E+LN + HI F L I ++ +RR
Sbjct: 509 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEILSFDSVRRR 559
>AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -2
Query: 408 PDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTNQRR 250
PD+ + +++G+++ F +LRL+ E+LN + HI F L I ++ +RR
Sbjct: 509 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEILSFDSVRRR 559
>AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -2
Query: 408 PDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTNQRR 250
PD+ + +++G+++ F +LRL+ E+LN + HI F L I ++ +RR
Sbjct: 509 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEILSFDSVRRR 559
>AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ40105 fis, clone TESTI2006383. ).
Length = 535
Score = 29.5 bits (63), Expect = 6.9
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 432 LADTNMPLPDQNS---GMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNT 262
L DT++ L D+ MMD LRQ R E + + QE++ K + ++ +
Sbjct: 359 LEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQMYKLDCG-- 416
Query: 261 NQRRRRALPSNNLLGSFSSRVR 196
R R +++ LG F++R R
Sbjct: 417 --RPGRGRSASSGLGEFNARAR 436
>AF083383-1|AAC64084.1| 310|Homo sapiens 38kDa splicing factor
protein.
Length = 310
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 303 CAWSED*GLLGASSADAGVQIWPGEVHPSCQNFDPAKAYSCPQASCATS 449
C+WS D + A SAD V +W SC + A S S TS
Sbjct: 232 CSWSPDGSKIAAGSADRFVYVWDTTSRRSCTSCLVTLAPSMKWLSTPTS 280
>AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein.
Length = 1102
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -2
Query: 408 PDQNSGMMDGLRQARFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSNTNQRR 250
PD+ + +++G+++ F +LRL+ E+LN + HI F L I ++ +RR
Sbjct: 477 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEILSFDSVRRR 527
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,297,914
Number of Sequences: 237096
Number of extensions: 1641005
Number of successful extensions: 4208
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4188
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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