Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0105
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical pr...   187   5e-48
U97189-6|AAC48162.1|  183|Caenorhabditis elegans Hypothetical pr...    31   0.62 
U39652-5|AAV28338.1|  986|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un...    28   3.3  

>Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical
           protein F40F8.10 protein.
          Length = 189

 Score =  187 bits (455), Expect = 5e-48
 Identities = 93/146 (63%), Positives = 111/146 (76%)
 Frame = +1

Query: 25  RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKVCS*APHP 204
           R+ +V SK   +PRRPFEK RLDQELK+IG +GL+NKREVWRVKYTLA++RK        
Sbjct: 3   RLKTVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTL 62

Query: 205 RGEGPQEIVRR*CPSTSLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKSGLAKSI 384
             + P+ +         LV+IGVLDE +MKLDYVLGLK+EDFLERRLQTQVFK GLAKSI
Sbjct: 63  EDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSI 122

Query: 385 HHARILIRQRHIRVRKQVVQHPMHLL 462
           HHARILI+Q HIRVR+QVV  P  ++
Sbjct: 123 HHARILIKQHHIRVRRQVVDVPSFIV 148


>U97189-6|AAC48162.1|  183|Caenorhabditis elegans Hypothetical
           protein C48B6.2 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 0.62
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +1

Query: 328 FLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVVQHPMHLLCAWTL-ASTWTDCS 501
           F  RRL   +   G+ +S+  A  L+ Q H+R+  ++V  P  ++   +    TWT  S
Sbjct: 105 FARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMITWTKAS 163


>U39652-5|AAV28338.1|  986|Caenorhabditis elegans Hypothetical
           protein R07E4.1b protein.
          Length = 986

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/42 (26%), Positives = 28/42 (66%)
 Frame = +1

Query: 316 KIEDFLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVV 441
           ++EDFLE+ ++ ++ +S   ++I H+R LI+  +   ++ ++
Sbjct: 164 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 205


>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
           protein R07E4.1a protein.
          Length = 1122

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/42 (26%), Positives = 28/42 (66%)
 Frame = +1

Query: 316 KIEDFLERRLQTQVFKSGLAKSIHHARILIRQRHIRVRKQVV 441
           ++EDFLE+ ++ ++ +S   ++I H+R LI+  +   ++ ++
Sbjct: 300 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 341


>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 6 protein.
          Length = 2098

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 415  HIRVRKQVVQHPMHLLCAWTLASTW 489
            H+  +  +VQ+P +++C WT  +T+
Sbjct: 2020 HLDTKNLLVQYPFNVICNWTSGNTY 2044


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,016,511
Number of Sequences: 27780
Number of extensions: 246380
Number of successful extensions: 794
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)