Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0105
(502 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 25 0.59
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 0.59
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.77
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.4
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 22 3.1
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 21 7.2
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 7.2
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.6 bits (51), Expect = 0.59
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 261 NQRRRRALPSNNLLGSFSSRVRSSRADLTD 172
N R + +N+LG + +R+R S + TD
Sbjct: 27 NYREKEKEVLDNILGGYDARIRPSGENATD 56
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.6 bits (51), Expect = 0.59
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 261 NQRRRRALPSNNLLGSFSSRVRSSRADLTD 172
N R + +N+LG + +R+R S + TD
Sbjct: 27 NYREKEKEVLDNILGGYDARIRPSGENATD 56
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 0.77
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 260 TRDVEGHYLRTISWGPSPRG*GAHEQTLRIRA 165
T +V G+ ++T+SW + G E LRI +
Sbjct: 328 TCNVRGNPIKTVSWLKDGKPLGLEEAVLRIES 359
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 98 SWSRRAFSKGRRGVTYVFENTDGTL 24
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 98 SWSRRAFSKGRRGVTYVFENTDGTL 24
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 98 SWSRRAFSKGRRGVTYVFENTDGTL 24
S++ + S + +TYV++N +GTL
Sbjct: 252 SFAIESISYEQTAITYVWKNDEGTL 276
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 98 SWSRRAFSKGRRGVTYVFENTDGTL 24
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 336 LQEVLNLQTKHIIEFHLFFIQYSNTNQRRR 247
++ V N+ K + F L F+Q N N++ +
Sbjct: 42 IRPVQNMTEKVHVNFGLAFVQLINVNEKNQ 71
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 200 TLEEKDPKRLFEGNALLRL 256
T EEK P+ F G L RL
Sbjct: 17 TPEEKRPRTAFSGEQLARL 35
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 124 LRNKREVWRVKYTLARIRKVCS 189
+ K + K T+ +RKVCS
Sbjct: 23 MSKKMTIEEAKKTIKNLRKVCS 44
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -2
Query: 225 LLGSFSSRVRSSRADLTDTSERVFD 151
+ G F+ +VR +R + T+ ++D
Sbjct: 299 IAGKFNLQVRGTRGEHTEAEGGIYD 323
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,039
Number of Sequences: 438
Number of extensions: 2919
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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