Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0104
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 539 CLQNIVDDEEVIRSTISLIC 480
           C++ +V+DEE   +T +++C
Sbjct: 53  CVKYLVEDEETSLATCNMLC 72



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 403 FGNDVSEKLNDALNNRLPELLETYNEQIRE 492
           + N + ++L +A NN LPE +  ++  + E
Sbjct: 396 YTNKMIDRLKNANNNELPEHVIMWSSPLTE 425


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 456 GKSVVQSVIQLFGYVVAEENNFESGLNIANSKNGTELP 343
           G  VV     +  YVV +   F+    ++ +K G ELP
Sbjct: 504 GFEVVYMTEPIDEYVVQQMKEFDGKTLVSVTKEGLELP 541


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 163 TNYIQHRPCPPQTQRLCCRRQRSGH 237
           T Y++H+  P  T    C  +  GH
Sbjct: 341 TQYVRHKNTPYHTPEPDCIHELLGH 365


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 307 TVSLRLLPSINVRELSAVLTVGNVES 384
           TVS   LPS ++ E++ V+   N+ S
Sbjct: 176 TVSANPLPSYDIPEINKVVDFINIMS 201


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 564 FRRYTLRRLFTKYC 523
           F+ Y LRR++  YC
Sbjct: 48  FKCYNLRRIYYFYC 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,704
Number of Sequences: 336
Number of extensions: 2370
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)