Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0104
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 30 1.1
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 30 1.1
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 29 1.9
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 29 1.9
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 28 4.5
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 28 4.5
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 27 7.9
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 27 7.9
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 27 7.9
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 27 7.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 7.9
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 27 7.9
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 27 7.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 7.9
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 27 7.9
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 388 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERITSSSS 522
L V+ D+ EKL D L + ++ ETY +++RE++ERI + +
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERIKDTET 649
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 388 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERITSSSS 522
L V+ D+ EKL D L + ++ ETY +++RE++ERI + +
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERIKDTET 649
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 388 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERITSSSS 522
L V+ D+ EKL D L + ++ ETY +++RE++ERI + +
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERIKDTET 649
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 388 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERITSSSS 522
L V+ D+ EKL D L + ++ ETY +++RE++ERI + +
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERIKDTET 649
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 388 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERITSSSS 522
L V+ D+ EKL D L + ++ ETY +++RE++ERI + +
Sbjct: 606 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERIKDTET 653
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical protein
C25A1.7 protein.
Length = 970
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 163 SQKVESDVIDDNVADALESQFGYCARCAEDVRN 65
SQ + + D+N + +ES+ YC RC + RN
Sbjct: 921 SQVILHENRDENSVELVESRLRYCERCRKHTRN 953
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 163 SQKVESDVIDDNVADALESQFGYCARCAEDVRN 65
SQ + + D+N + +ES+ YC RC + RN
Sbjct: 921 SQVILHENRDENSVELVESRLRYCERCRKHTRN 953
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 301 VSTVSLRLLPSI-NVRELSAVLTVGNVESALKVVLFGNDVSEKLNDALNNRLPELLETYN 477
VS +L LPS+ ++ L V GN+ + ++ + F N+ + +L NN + ++
Sbjct: 278 VSNNALYALPSLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSF 337
Query: 478 EQIREIVERITSSSS 522
E + ++V + ++S
Sbjct: 338 ESLDKLVVLLVGNNS 352
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 MAVASSGSLVVEDIRLVSTVSLRLLPSINVRELSAVLTVGNVESALKVVLFGNDVSEKLN 432
MA SG+ V+D+RL+ + + + N +S ++ G V K F N S+
Sbjct: 374 MAAVLSGAEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFIN--SDDFQ 431
Query: 433 DALNNRLPE---LLETYNEQIREI 495
++N + E +L ++N Q+ EI
Sbjct: 432 TSINVPVYEGERVLCSHNRQLGEI 455
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 MAVASSGSLVVEDIRLVSTVSLRLLPSINVRELSAVLTVGNVESALKVVLFGNDVSEKLN 432
MA SG+ V+D+RL+ + + + N +S ++ G V K F N S+
Sbjct: 374 MAAVLSGAEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFIN--SDDFQ 431
Query: 433 DALNNRLPE---LLETYNEQIREI 495
++N + E +L ++N Q+ EI
Sbjct: 432 TSINVPVYEGERVLCSHNRQLGEI 455
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 370 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 504
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,376,074
Number of Sequences: 27780
Number of extensions: 234160
Number of successful extensions: 828
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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