Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0101
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 58  NCFKLVTRDPVLFARPT 8
           N F+LVT +P+L  RP+
Sbjct: 267 NIFELVTVEPILTERPS 283


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 481 EEQDWKALCLANYYPPGNYS 540
           EE DW+      YYP   YS
Sbjct: 283 EEFDWQKPFYPGYYPTMTYS 302


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 481 EEQDWKALCLANYYPPGNYS 540
           EE DW+      YYP   YS
Sbjct: 283 EEFDWQKPFYPGYYPTMTYS 302


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 624 VVRFSRRTIVARAELHSPRG 565
           +VRF R TI     L SPRG
Sbjct: 30  LVRFRRFTIELDKVLESPRG 49


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 511 ANYYPPGNYSGLFVKNVLP 567
           AN +  G+     VKN++P
Sbjct: 588 ANVFAKGDMEAFLVKNIIP 606


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 201 EAKRHALVCIHYGLPML 151
           E   HA++C++ GL M+
Sbjct: 333 ERPDHAVLCVYMGLSMV 349


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 205 TRGETPCSRLYSLWTSNASFSKSFDLEVNSLLI 107
           +RG+   SR+  L   +   S+    EV SLL+
Sbjct: 19  SRGDNDRSRIARLGRDDGGKSRQSSFEVTSLLM 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,702
Number of Sequences: 438
Number of extensions: 4050
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)