Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0101
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33720.1 68417.m04788 pathogenesis-related protein, putative ... 45 5e-05
At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protei... 44 9e-05
At2g19980.1 68415.m02336 allergen V5/Tpx-1-related family protei... 43 3e-04
At4g33730.1 68417.m04789 pathogenesis-related protein, putative ... 42 6e-04
At5g26130.1 68418.m03108 pathogenesis-related protein, putative ... 41 0.001
At4g25780.1 68417.m03710 pathogenesis-related protein, putative ... 40 0.002
At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1) i... 40 0.002
At4g31470.1 68417.m04471 pathogenesis-related protein, putative ... 38 0.006
At3g09590.1 68416.m01139 pathogenesis-related protein, putative ... 38 0.007
At3g19690.1 68416.m02494 pathogenesis-related protein, putative ... 37 0.017
At2g14580.1 68415.m01633 pathogenesis-related protein, putative ... 37 0.017
At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protei... 36 0.023
At2g19970.1 68415.m02335 pathogenesis-related protein, putative ... 36 0.030
At4g33710.1 68417.m04787 pathogenesis-related protein, putative ... 36 0.040
At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protei... 36 0.040
At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1) i... 36 0.040
At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protei... 35 0.069
At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protei... 33 0.16
At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protei... 31 0.85
At3g15200.1 68416.m01921 pentatricopeptide (PPR) repeat-containi... 31 0.85
At5g66120.2 68418.m08330 3-dehydroquinate synthase, putative sim... 30 2.0
At2g37960.1 68415.m04659 expressed protein 30 2.0
At1g50060.1 68414.m05617 pathogenesis-related protein, putative ... 29 2.6
At2g17580.1 68415.m02034 polynucleotide adenylyltransferase fami... 29 3.4
At1g50050.1 68414.m05616 pathogenesis-related protein, putative ... 29 3.4
At4g07820.1 68417.m01237 pathogenesis-related protein, putative ... 29 4.5
>At4g33720.1 68417.m04788 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 163
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSEL 466
YGE++ WS T + A VD W E ++ + + CGH+TQ++WR++ L
Sbjct: 79 YGENI--AWSSGSMTGVAA---VDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERL 133
Query: 467 GIGSAKSKTGKLYVS 511
G + G+ +++
Sbjct: 134 GCAKVRCNNGQTFIT 148
>At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protein
similar to pathogenesis related protein-1 GB:AAC25629
GI:3290004 from [Zea mays]; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 241
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +2
Query: 284 NQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSF-GK--EPEVLNCGHFTQIIWRS 454
N YGE+++ W+ N RD V+ W E + G EP+ + CGH+TQI+WR
Sbjct: 131 NGPYGENIF--WAGKNNWS--PRDIVNVWADEDKFYDVKGNTCEPQHM-CGHYTQIVWRD 185
Query: 455 TSELGIGSAKSKTGKLY 505
++++G S G +Y
Sbjct: 186 STKVGCASVDCSNGGVY 202
>At2g19980.1 68415.m02336 allergen V5/Tpx-1-related family protein
low similarity to SP|P33154 Pathogenesis-related protein
1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 165
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 266 SLAYSLNQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLNCGHFTQII 445
++ YS + YGE++ GW P + W++E +++ CGH+TQI+
Sbjct: 68 AMKYSTDGTYGENIAAGWV-QPMDTMSGPIATKFWFTEKPYYNYATNKCSEPCGHYTQIV 126
Query: 446 WRSTSELGIGSAK 484
++ LG G+ +
Sbjct: 127 ANQSTHLGCGTVR 139
>At4g33730.1 68417.m04789 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 172
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSF-GKEPEVLNCGHFTQIIWRSTSELG 469
YGE++ G S D + A V W E + + F CGH+TQ++WR ++ LG
Sbjct: 89 YGENLAFG-SGD----MSAAQAVAMWVHEKSYYDFYSNSCHGPACGHYTQVVWRGSARLG 143
Query: 470 IGSAKSKTG 496
G AK G
Sbjct: 144 CGKAKCNNG 152
>At5g26130.1 68418.m03108 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 164
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 266 SLAYS-LNQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEP--EVLNCGHFT 436
SL +S N YGE++ WS + + V W +E +++ + + CGH+T
Sbjct: 70 SLTHSNSNGLYGENL--AWS---GGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYT 124
Query: 437 QIIWRSTSELGIGSAKSKTGKLYVS 511
Q++WR++ +G K G +V+
Sbjct: 125 QVVWRTSEWVGCAKVKCDNGGTFVT 149
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 475 KCEEQDWKALCLANYYPPGNYSG 543
KC+ C NYYPPGNY G
Sbjct: 140 KCDNGGTFVTC--NYYPPGNYRG 160
>At4g25780.1 68417.m03710 pathogenesis-related protein, putative
similar to gene PR-1 protein - Medicago truncatula,
SP|Q40374; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 190
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 GESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSELG 469
GE++Y G+ + + D V W SE + +G CGH+TQI+W+ST +G
Sbjct: 106 GENIYWGYGANWSPA----DAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVG 161
Query: 470 IGSAKSKTGKLYVS 511
G ++++
Sbjct: 162 CARVVCDNGGIFMT 175
>At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1)
identical to GB:M90508 SP|P33154
Length = 161
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGI 472
YGE++ W + + A V+ W SE +++ CGH+TQ++WR + LG
Sbjct: 79 YGENL--AWGSGDLSGVSA---VNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSVRLGC 133
Query: 473 GSAKSKTGKLYVS 511
+ G +S
Sbjct: 134 AKVRCNNGGTIIS 146
>At4g31470.1 68417.m04471 pathogenesis-related protein, putative
similar to pathogenesis related protein-1 from Zea mays
GI:3290004; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 185
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +2
Query: 293 YGESVYCG----WSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRS 454
YGE+++ G W+P RD V W SE+ + N C H+TQ++W+
Sbjct: 100 YGENLFWGSGKGWTP--------RDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKK 151
Query: 455 TSELGIGSAKSKTGKLYV 508
+S +G + KTG ++
Sbjct: 152 SSRIGCAISFCKTGDTFI 169
>At3g09590.1 68416.m01139 pathogenesis-related protein, putative
similar to SP|Q05968 Pathogenesis-related protein 1
precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 186
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLN----CGHFTQIIWRSTS 460
YGE+++ W T + V +W+ E F++ + CGH+TQ++WR T+
Sbjct: 99 YGENIF--WHRRKKTWSPEK-VVTRWFEE--RFNYDVKTNTCAPGKMCGHYTQMVWRETT 153
Query: 461 ELGIGSAKSKTGKLYV 508
+G K G+ Y+
Sbjct: 154 AVGCARVKCHNGRGYL 169
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 TMSRLFT-SKSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEE 251
T +RL ++ E L+ HN+ R GV L ++++++ + KWA++
Sbjct: 36 TAARLVNRARRAKLSREFLQAHNDARVSSGVPTLGWDRDLARFADKWAKQ 85
>At3g19690.1 68416.m02494 pathogenesis-related protein, putative
similar to PR-1a protein GI:19944 GB:X06930 from
[Nicotiana tabacum]; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 161
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 120 FTSKSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELLKE 263
+ S + D + + LE HNE R E G+ PLV + E++ + +A + + +
Sbjct: 18 YGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRIND 65
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 338 KIKARDCVDKWYSEINEFSFGK----EPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLY 505
++ A D + W +E + + +P C H+TQ++W++T LG +G +
Sbjct: 85 EMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVCNSGGTF 144
Query: 506 VS 511
++
Sbjct: 145 IT 146
>At2g14580.1 68415.m01633 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 161
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 359 VDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGIGSAKSKTGKLYVS 511
V+ W +E +++ CGH+TQ++WR++ LG + G +S
Sbjct: 96 VNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIIS 146
>At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protein
low similarity to SP|Q05968 Pathogenesis-related protein
1 precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 205
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEP--EVLNCGHFTQIIWRSTSEL 466
YGE+++ + N R VDKW E + CGH+TQI+WR+T+ +
Sbjct: 106 YGENIF-RYQRSENWS--PRRVVDKWMDESLNYDRVANTCKSGAMCGHYTQIVWRTTTAV 162
Query: 467 GIGSAK 484
G +K
Sbjct: 163 GCARSK 168
>At2g19970.1 68415.m02335 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 177
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGI 472
YGE++ GW P ++ W +E + CGH+TQ++ + LG
Sbjct: 89 YGENIAAGWV-QPKDQMSGPIAAKYWLTEKPNYDHATNKCKDVCGHYTQMVANQSLSLGC 147
Query: 473 GSAKSKTGKL 502
GS + +L
Sbjct: 148 GSFRCHENEL 157
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 150 EALEVHNEYRREHGVSPLVINKEISKISQKWAEELLKETV 269
+ L+VHN+ R GV+PL NK ++ +QK+A K V
Sbjct: 37 KTLKVHNQIRAAVGVAPLKWNKTVAAYAQKFANRQAKAGV 76
>At4g33710.1 68417.m04787 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 166
Score = 35.5 bits (78), Expect = 0.040
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +2
Query: 257 KRDSLAYSLNQR--YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVL---N 421
KRD N R YGE++ WS + A V W E +++ F K
Sbjct: 68 KRDCRLIHSNSRGRYGENL--AWSSGDMSGAAA---VRLWVREKSDY-FHKSNTCRAGKQ 121
Query: 422 CGHFTQIIWRSTSELGIGSAKSKTGKLYVSQTTIH 526
CGH+TQ++W+++ +G K G +V+ H
Sbjct: 122 CGHYTQVVWKNSEWVGCAKVKCDNGGTFVTCNYSH 156
>At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 210
Score = 35.5 bits (78), Expect = 0.040
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 266 SLAYSLNQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGK---EPEVLNCGHFT 436
SL +S YGE+++ G D + V+ W E ++ E + + CGH+T
Sbjct: 116 SLTHSTGP-YGENLFWGSGSDFTSTF----AVESWTVEAKSYNHMTNTCEGDGM-CGHYT 169
Query: 437 QIIWRSTSELGIGSAKSKTG 496
QI+WR T LG + G
Sbjct: 170 QIVWRETRRLGCARVVCENG 189
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 132 SNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEE 251
+ FE + L+ HN R G+ PLV + +I+ + WA +
Sbjct: 71 TGSFEQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQ 110
>At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1)
identical to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains an extracellular proteins
SCP/Tpx-1/Ag5/PR-1/Sc7 signature (PDOC00772)
Length = 176
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 293 YGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSEL 466
+GE++ GW + + W +E + + + CGH+TQI+WR + L
Sbjct: 91 FGENLAAGWGT-----MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRL 145
Query: 467 GIGSAKSK 490
G S + K
Sbjct: 146 GCASVRCK 153
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 150 EALEVHNEYRREHGVSPLVINKEISKISQKWAEELLKE 263
E L VHN+ R GV P+V N+ ++ +Q +A E ++
Sbjct: 44 ETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARD 81
>At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 161
Score = 34.7 bits (76), Expect = 0.069
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 284 NQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEP-EVLNCGHFTQIIWRSTS 460
N YGE+++ G + W SE +++ CGH+TQI+W++T
Sbjct: 73 NGPYGENLFWG----SGNRWGPSQAAYGWLSEARSYNYRSNSCNSEMCGHYTQIVWKNTQ 128
Query: 461 ELG 469
++G
Sbjct: 129 KIG 131
>At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protein
low similarity to SP|Q40374 Pathogenesis-related protein
PR-1 precursor {Medicago truncatula}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 207
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 422 CGHFTQIIWRSTSELGIGSAKSKTG 496
CGH+TQ++WR T LG + G
Sbjct: 162 CGHYTQMVWRDTKRLGCARVVCENG 186
>At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protein
contains similarity to SP|Q41495 STS14 protein precursor
{Solanum tuberosum}; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 185
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 359 VDKWYSEINEFSFGKEPEVLN--CGHFTQIIWRSTSELGIGSA 481
V+ W E +++ + N CG + Q++WR++ ELG A
Sbjct: 117 VETWVKEKPFYNYKSDTCAANHTCGVYKQVVWRNSKELGCAQA 159
>At3g15200.1 68416.m01921 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 523
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 120 FTSKSNDFENE--ALEVHNEYRREHGVSPLVINKEISKISQKWAEELLKETVS 272
F ++ ND +++ AL+VHN + G SP I + + K EEL+ E V+
Sbjct: 65 FPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVN 117
>At5g66120.2 68418.m08330 3-dehydroquinate synthase, putative
similar to aroB [Neisseria gonorrhoeae][GI:2661441];
contains 3-dehydroquinate synthase domain PF01761
Length = 442
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 470 IGSAKSKTGKLYVSQTTI-HQEITAGYSLKMSYPL 571
+ SAKSK G+L +S TT+ + AG S M+ PL
Sbjct: 35 VASAKSKPGELSLSSTTLSRSRVRAGASQLMNEPL 69
>At2g37960.1 68415.m04659 expressed protein
Length = 480
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 270 SPTV*TKGMVKVSTADGHLTQIQRSKLETA*INGTAKSMSFPLARSL-KC 416
+P+V KGM K+ A +LT S+++T NG A + S L S+ KC
Sbjct: 197 APSVSRKGMKKIPQAANYLTFQTPSEMQTPLNNGVATNESSDLTSSVAKC 246
>At1g50060.1 68414.m05617 pathogenesis-related protein, putative
similar to prb-1b [Nicotiana tabacum] GI:19970; contains
Pfam profile PF00188: SCP-like extracellular protein
Length = 161
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 KRDSLAYSLNQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEV--LNCGH 430
K D N YGE++ G S + A V W E +S+ C H
Sbjct: 64 KADCNLVHSNGPYGENLAKGSS----SSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLH 119
Query: 431 FTQIIWRSTSELGIGSAKSKTGKLYVS 511
+TQ++WR + ++G + +VS
Sbjct: 120 YTQVVWRDSVKIGCARVQCTNTWWFVS 146
>At2g17580.1 68415.m02034 polynucleotide adenylyltransferase family
protein similar to SP|P13685 Poly(A) polymerase (EC
2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 757
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 171 EYRREHGVSPLVINKEISKISQKWAEELLKETVS 272
E+ REH S + E+SK S+K ++E L E VS
Sbjct: 400 EFAREHETSVIGYAPEVSKSSRKRSDEDLAEAVS 433
>At1g50050.1 68414.m05616 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1b precursor
(pr-1b) GB:X03465 GI:19977 from [Nicotiana tabacum];
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 226
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 266 SLAYSLNQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSFGKEPEV--LNCGHFTQ 439
SL S YGE++ G N V+ W +E +++ + C H+TQ
Sbjct: 68 SLTPSTGGSYGENLANG----NNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQ 123
Query: 440 IIWRSTSELGIGSAKSKTGKLYV 508
++W ++ ++G G +V
Sbjct: 124 VVWSNSVKIGCARVLCNNGGYFV 146
>At4g07820.1 68417.m01237 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 160
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 129 KSNDFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEE 251
K+ D + HN R GVSPL+ ++ ++ +Q +AE+
Sbjct: 24 KAQDQPQDYFNAHNRARVSVGVSPLMWSQTLTAYAQAYAEK 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,837,760
Number of Sequences: 28952
Number of extensions: 316622
Number of successful extensions: 769
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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