Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0100
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 25 4.6
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 29 4.7
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 29 4.7
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 4.7
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 29 4.7
U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 29 4.7
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 29 4.7
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 29 4.7
U64836-7|AAG24061.1| 674|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC006638-7|AAK85485.2| 491|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 24.6 bits (51), Expect(2) = 4.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -1
Query: 462 FYNHHHHH 439
++NHHHHH
Sbjct: 27 YHNHHHHH 34
Score = 22.6 bits (46), Expect(2) = 4.6
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 456 NHHHHHQ 436
+HHHHHQ
Sbjct: 30 HHHHHHQ 36
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 340 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 373
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 274 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 307
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 274 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 307
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 340 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 373
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 274 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 307
>U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical
protein B0495.5 protein.
Length = 729
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 582 LYQYQQSLLHPSGGSQSAVLHRPLPHNNAFNWV 680
+YQY Q + H GG +A LP++N+ N V
Sbjct: 317 IYQYMQKISHKDGGFYAAEDADSLPNHNSSNKV 349
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 274 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 307
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 274 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 307
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 700 DAISCHPTQLNALLCGNGLCRTADCEPPLGCSKDC 596
D SC ++L A +C +C+T DCE P C
Sbjct: 274 DCTSCTCSELGAHMCEKYMCKT-DCENPRKVEGQC 307
>U64836-7|AAG24061.1| 674|Caenorhabditis elegans Hypothetical
protein F10G2.7 protein.
Length = 674
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Frame = -1
Query: 336 LMMLPCRNKVVQEFEER---------RWMHDARKYQQSVVLICKLCYAECSSVDHG 196
L + C K V FE R W K + S + IC L Y C+ DHG
Sbjct: 284 LKEMKCSGKEVSTFEMRSSQLCTHALHWFAPFLKEKPSRIHICNLTYKHCAPEDHG 339
>AC006638-7|AAK85485.2| 491|Caenorhabditis elegans Hypothetical
protein F41G4.5 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 43 LAAKTDFIYATGQRASFYFIKAAPQWQPFNAGNWNRLEQNLR 168
LAA+T + R SF +K +P + + WN++EQN +
Sbjct: 317 LAAQT-YTPTVRDRESFKPVKKSPPPETWTQDQWNKVEQNCK 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,339,592
Number of Sequences: 27780
Number of extensions: 355353
Number of successful extensions: 1259
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -