Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0099
(785 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 149 6e-35
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 127 4e-28
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 123 6e-27
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 122 8e-27
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 117 4e-25
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 117 4e-25
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 110 4e-23
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 101 2e-20
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 101 2e-20
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 100 4e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 8e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 100 8e-20
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 97 6e-19
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 96 1e-18
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 95 1e-18
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 94 4e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 93 9e-18
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 85 3e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 83 6e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 79 9e-14
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 75 2e-12
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 75 3e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 71 3e-11
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 64 3e-09
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 62 1e-08
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 62 2e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 61 3e-08
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 60 6e-08
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 58 2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 53 7e-06
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 53 9e-06
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 46 8e-04
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 45 0.002
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.29
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 38 0.38
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.50
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.87
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.5
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 2.0
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 35 2.7
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase fam... 35 2.7
UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;... 34 3.5
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 3.5
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 4.6
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 6.1
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 8.1
UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 33 8.1
UniRef50_Q7S3K1 Cluster: Predicted protein; n=1; Neurospora cras... 33 8.1
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 149 bits (362), Expect = 6e-35
Identities = 70/93 (75%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = +2
Query: 509 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
+++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+
Sbjct: 8 VVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRL 67
Query: 689 QRKGPLIIFNKDQGLTRVSATSP-V*LLNVNKL 784
RKGPLII+NKDQGLTR P V ++NVNKL
Sbjct: 68 HRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKL 100
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 127 bits (306), Expect = 4e-28
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 125 bits (301), Expect = 1e-27
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQ
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQ 203
Query: 692 RKGPLIIFNKDQGLTRVSATSP-V*LLNVNKL 784
R+GP II+N+D G+ + P + LLNV+KL
Sbjct: 204 RRGPCIIYNEDNGIIKAFRNIPGITLLNVSKL 235
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 123 bits (296), Expect = 6e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 120 bits (289), Expect = 4e-26
Identities = 55/93 (59%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Frame = +2
Query: 509 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI
Sbjct: 146 VIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRI 205
Query: 689 QRKGPLIIFNKDQGLTRVSATSP-V*LLNVNKL 784
R+GPL++++KD+GL + P + +NV+KL
Sbjct: 206 ARRGPLVVYDKDEGLRKAFRNIPGIETINVDKL 238
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 122 bits (295), Expect = 8e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 175 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1
Query: 109 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 255
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS E
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVE 174
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 117 bits (281), Expect = 4e-25
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 34 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +2
Query: 512 IEKIPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 682
+ +PE+PLV++ I KT AV L+ + A +D K S++LRAGKGK+R RR
Sbjct: 120 VSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRR 179
Query: 683 RIQRKGPLIIFNKDQ 727
QR+GPL+I+N D+
Sbjct: 180 HKQRRGPLVIYNPDE 194
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 117 bits (281), Expect = 4e-25
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 57 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +1
Query: 91 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 255
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 682
I ++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 143 ISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRR 202
Query: 683 RIQRKGPLIIFN 718
QR+GPL++++
Sbjct: 203 HRQRRGPLVVYD 214
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 110 bits (264), Expect = 4e-23
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +3
Query: 252 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 416
GAG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I + E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+
Sbjct: 144 ISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKI 203
Query: 692 RKGPLIIFNKDQGLTRVSATSP-V*LLNVNKL 784
GPLII++ D G+ + P V L NV KL
Sbjct: 204 SNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKL 235
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 246
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 101 bits (243), Expect = 2e-20
Identities = 49/94 (52%), Positives = 53/94 (56%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 59 AGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINT 118
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFP 536
ARG + P P
Sbjct: 119 TEKRHAVAAAIAATGCPSLVMARGHRINNVPELP 152
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRR 685
I +PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR
Sbjct: 145 INNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRR 204
Query: 686 IQRKGPLIIFNKDQGLTR 739
+ GPL+++ +D G+ +
Sbjct: 205 VCAVGPLVVYAEDNGIVK 222
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 249
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVS 56
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 101 bits (242), Expect = 2e-20
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
+G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 57 SGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 50.0 bits (114), Expect = 7e-05
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +1
Query: 94 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
Score = 41.9 bits (94), Expect = 0.018
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
IE + E+P+VV D +++INKTK AV L + +++ ++ K G+ R+ R+ +
Sbjct: 143 IEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKV------TGRARDGRKKR 196
Query: 692 RKGPLII 712
GPLII
Sbjct: 197 PVGPLII 203
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 100 bits (240), Expect = 4e-20
Identities = 49/94 (52%), Positives = 51/94 (54%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 59 AGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNI 118
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFP 536
ARG + + P P
Sbjct: 119 KQKRHAAATAVAATGIVPLVLARGHRISQVPQIP 152
Score = 70.1 bits (164), Expect = 6e-11
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 145 ISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRV 204
Query: 692 RKGPLII-FNKDQGLTRVSATSP-V*LLNVNKL 784
RKGPL++ FN++ L + P V ++NV +L
Sbjct: 205 RKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRL 237
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 255
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQ 58
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.5 bits (237), Expect = 8e-20
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
+G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 57 SGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 88 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 673
+E +PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 143 VESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 99.5 bits (237), Expect = 8e-20
Identities = 46/62 (74%), Positives = 49/62 (79%)
Frame = +3
Query: 234 ALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 413
A+ R G H SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RR
Sbjct: 52 AVNRLSGMNH--SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRR 109
Query: 414 WH 419
WH
Sbjct: 110 WH 111
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/91 (40%), Positives = 58/91 (63%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR +
Sbjct: 143 IGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVA 202
Query: 692 RKGPLIIFNKDQGLTRVSATSPV*LLNVNKL 784
R+GP+++ ++G + L NV+ L
Sbjct: 203 RRGPMLVMPNNKGTRAFRNIFGLDLANVSAL 233
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +1
Query: 91 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 96.7 bits (230), Expect = 6e-19
Identities = 45/96 (46%), Positives = 53/96 (55%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 53 AGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINK 112
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFPWL 542
+RG +K P P++
Sbjct: 113 NQRKSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFV 148
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/71 (36%), Positives = 46/71 (64%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR +
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKK 197
Query: 692 RKGPLIIFNKD 724
GPL++F +
Sbjct: 198 PTGPLLVFKNN 208
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 95.9 bits (228), Expect = 1e-18
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 58 AGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 81.8 bits (193), Expect = 2e-14
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I+ +PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR Q
Sbjct: 144 IDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQ 203
Query: 692 RKGPLIIFNKDQGLTRVSAT-SPV*LLNVNKL 784
R+G LI+ ++++GL S V + NV +L
Sbjct: 204 RRGVLIVHDQNEGLANAFRNISGVDISNVXRL 235
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 100 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 240
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 95.5 bits (227), Expect = 1e-18
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 8/123 (6%)
Frame = +2
Query: 410 ALAPSRQPPTAESGLGSSRCCYWRPSARSG*RTIIEKIP-ELPLVVA-------DKVQEI 565
A++ S T+ G+ R P R G TI+ ++ E+ +V A KV+
Sbjct: 43 AVSESAGYQTSAESWGTGRARGPMPRVRGGGLTILARVLLEICVVEAACLHQPGHKVEGY 102
Query: 566 NKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRVS 745
KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G+ + S
Sbjct: 103 KKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKAS 162
Query: 746 ATS 754
TS
Sbjct: 163 ETS 165
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGG 332
+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 46 ESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 93.9 bits (223), Expect = 4e-18
Identities = 45/92 (48%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
+E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +Q
Sbjct: 147 VEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQ 206
Query: 692 RKGPLIIFNKDQGLTRVSATSP-V*LLNVNKL 784
R+GPL+++++D G+TR P V L +V++L
Sbjct: 207 RRGPLVVYSEDNGVTRAFRNIPGVELCSVDRL 238
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 139 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 225
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 92.7 bits (220), Expect = 9e-18
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 416
+ AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 53 KNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I + LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR Q
Sbjct: 141 ISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQ 200
Query: 692 RKGPLII 712
RKG LI+
Sbjct: 201 RKGILIV 207
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +1
Query: 103 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ Y TV+ LP VF PIR DLV + +RQPY VSK
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSK 53
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/101 (43%), Positives = 53/101 (52%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 58 AGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPK 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFPWL*PTKS 557
ARG + P P + +KS
Sbjct: 118 QMRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/72 (50%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +2
Query: 512 IEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
I +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 144 IAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIK 203
Query: 689 QRKGPLIIFNKD 724
+RKGPL+++ D
Sbjct: 204 ERKGPLVVYGND 215
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 91 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 249
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVS 55
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 83.4 bits (197), Expect = 6e-15
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 7 IGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNPLASS 66
Query: 692 RKGPLIIFNKDQGLTRVSATS 754
P K +R S TS
Sbjct: 67 AGDPASSTMKTTVSSRPSETS 87
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 79.4 bits (187), Expect = 9e-14
Identities = 36/101 (35%), Positives = 53/101 (52%)
Frame = +3
Query: 240 LREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
++ +G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 54 IKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
Query: 420 XXXXXXXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFPWL 542
+RG LK +FP +
Sbjct: 114 IKTNRKVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMI 154
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 75.4 bits (177), Expect = 2e-12
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRNRR I
Sbjct: 7 IESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYIS 66
Query: 692 RKGPLIIFNKDQG-LTRVSATSP-V*LLNVNKL 784
RKGPLI++ + L + P V + NV++L
Sbjct: 67 RKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRL 99
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/94 (40%), Positives = 45/94 (47%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 55 AGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPS 114
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFP 536
QARG +L P
Sbjct: 115 RQRKFAIASAIAATAVVPLVQARGHVLGEVKEVP 148
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/83 (34%), Positives = 51/83 (61%)
Frame = +2
Query: 509 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
++ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R
Sbjct: 140 VLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYK 199
Query: 689 QRKGPLIIFNKDQGLTRVSATSP 757
+KGPL+I+N+D+G+ + P
Sbjct: 200 TKKGPLVIYNEDKGIVKAFRNIP 222
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +1
Query: 88 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 240
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 70.9 bits (166), Expect = 3e-11
Identities = 27/75 (36%), Positives = 52/75 (69%)
Frame = +2
Query: 509 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR +
Sbjct: 137 VIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYV 196
Query: 689 QRKGPLIIFNKDQGL 733
+ K LI+ ++D+G+
Sbjct: 197 KPKSVLIVVDEDEGI 211
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 416
AG +TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 52 AGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
I +P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I
Sbjct: 134 IADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYIT 191
Query: 692 RKGPLIIFNKD 724
RKGPL+I+N +
Sbjct: 192 RKGPLVIYNTE 202
Score = 57.6 bits (133), Expect = 3e-07
Identities = 37/106 (34%), Positives = 45/106 (42%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 54 AGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNL 107
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFPWL*PTKSRRSTR 572
+ARG + PS P + T + T+
Sbjct: 108 NQRRYAVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTK 153
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 97 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
P V V+ V A P P VF P+RPD++N VH + K R PY VS+
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 62.5 bits (145), Expect = 1e-08
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +2
Query: 527 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 706
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +++K L
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVL 195
Query: 707 IIFNKDQGLTRVSATSP 757
++ KD G+ + + P
Sbjct: 196 LVVGKDDGVVKAAKNLP 212
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +2
Query: 509 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
++EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR
Sbjct: 160 VVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYK 219
Query: 689 QRKGPLII 712
+ K L++
Sbjct: 220 EPKSVLVV 227
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/96 (31%), Positives = 41/96 (42%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 428
+GAG + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 429 XXXXXXXXXXXXXXXXXXXXXXQARGQLLKRFPSFP 536
ARG ++++ PS P
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLP 168
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +2
Query: 527 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 706
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K L
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVL 199
Query: 707 IIFNKDQGLTRVSATSPV*LLNVNKL 784
I+ + + V + + N L
Sbjct: 200 IVARNSSAMKAFRSLPGVDIASPNSL 225
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 60.1 bits (139), Expect = 6e-08
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = +2
Query: 542 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 718
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 719 KDQGLTRVSATSP-V*LLNVNKL 784
++ L + P V ++NV +L
Sbjct: 61 ENAKLLKAFRNVPGVEVVNVTRL 83
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 58.4 bits (135), Expect = 2e-07
Identities = 21/75 (28%), Positives = 47/75 (62%)
Frame = +2
Query: 512 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 691
+ ++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R+
Sbjct: 134 VSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRT 193
Query: 692 RKGPLIIFNKDQGLT 736
KGPL++ D+G++
Sbjct: 194 PKGPLVVVGNDRGIS 208
Score = 38.7 bits (86), Expect = 0.16
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 401
AG +T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 53 AGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 53.2 bits (122), Expect = 7e-06
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = +2
Query: 509 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 688
II+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R R I
Sbjct: 147 IIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYI 202
Query: 689 QRKGPLIIFN 718
+RKGPLI+ N
Sbjct: 203 ERKGPLIVVN 212
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 533 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 712
P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ + GPLII
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLII 206
Score = 37.9 bits (84), Expect = 0.29
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 243 REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 395
R+ AG +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 46.4 bits (105), Expect = 8e-04
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +2
Query: 278 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 433
++G+R C SA W VR C+R HV WW +VR E L LAP QP
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 207 RFYVQELEAALL---REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 377
R ++ E A L R+ AG +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 378 GRMFAPTK 401
GR P +
Sbjct: 101 GRAAHPPR 108
Score = 38.7 bits (86), Expect = 0.16
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 530 LPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 706
LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR RR K L
Sbjct: 151 LPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVL 210
Query: 707 II 712
+
Sbjct: 211 FV 212
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.29
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 397 VGANIRPPRHMLPKAP*P 344
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 37.5 bits (83), Expect = 0.38
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 255 AGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 401
AG SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 52 AGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.50
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 500 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 399
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 36.3 bits (80), Expect = 0.87
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +3
Query: 252 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
GA H AE + T AR PR GGG HR GA G + RGG
Sbjct: 186 GAPH-AEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 360 RRHPDRTYGYHHHGHAEFGQQHVR-YP 283
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 243 REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 383
RE G G A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 225 LEAALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 347
L A+ R G G +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 375 HDTCYRRHPDRTYGYHHHGHAEFG 304
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase family
protein; n=1; Trichomonas vaginalis G3|Rep:
Phosphatidylinositol 3-and 4-kinase family protein -
Trichomonas vaginalis G3
Length = 2286
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -2
Query: 736 SQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQE-DDSLFGLVDL 560
SQ LI+ +Y L ++ F TS+ + V LK + C Q+ + S++ ++DL
Sbjct: 1065 SQKLIIDSEYLRGKILPIAFLSCFLNTSSDQ-KEVFLKQLNDCFSLGQKINSSIYKIIDL 1123
Query: 559 LDFVGYN 539
L+ +GYN
Sbjct: 1124 LEMLGYN 1130
>UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;
n=1; Janibacter sp. HTCC2649|Rep: Hypothetical short
chain dehydrogenase - Janibacter sp. HTCC2649
Length = 217
Score = 34.3 bits (75), Expect = 3.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 240 LREQGAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGG 380
+R+QG GH + SWG + + PRV G H ++CR G
Sbjct: 123 MRDQGFGHVVNVTSWGVQKKQPKFSPRVEVGARHMGPHRRARDLCRRG 170
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 3.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 387 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 274
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 4.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 375 HDTCYRRHPDRTYGYHHHGHAEFGQQH 295
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 6.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 376 PRHMLPKAP*PDLWVPPPR 320
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 8.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 378 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 298
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 366
Score = 33.1 bits (72), Expect = 8.1
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 150 APPVRIQGAHTSG-PGQ*CSRFYVQELEAALLREQ----GAGHQTSAESWGTGRAVARIP 314
APP + H G PG+ + V ++ R + G GHQ S + T A AR+
Sbjct: 68 APPASVWAVHVDGGPGERAALVLVDRVDDGGRRTELLAGGGGHQASLAAT-TPAAAARLG 126
Query: 315 RVRGGGTHRSG 347
+V G HR G
Sbjct: 127 QVLGEAAHRRG 137
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 33.1 bits (72), Expect = 8.1
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 72 RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRFYVQELEAALLREQ 251
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 252 GAGHQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 389
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_Q7S3K1 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 352
Score = 33.1 bits (72), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 175 PIRPDLVNDVHVSMSKNSRQPYCVSKELVTKPVPNHGVP 291
P +PDL + H ++++ P + E+ KP PNH P
Sbjct: 134 PAQPDLQTETHAIRARDAGPPTRQTDEMNLKPTPNHWAP 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,466,243
Number of Sequences: 1657284
Number of extensions: 17130433
Number of successful extensions: 56038
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55639
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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