Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0098
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5) 25 0.91
SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 30 1.2
SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 2.2
SB_46831| Best HMM Match : YiaAB (HMM E-Value=8.3) 29 2.2
SB_27237| Best HMM Match : MinC_C (HMM E-Value=3) 29 2.2
SB_9554| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_52871| Best HMM Match : Cyanate_lyase (HMM E-Value=7.8) 29 2.2
SB_36099| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 29 3.8
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 29 3.8
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 29 3.8
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.8
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_38530| Best HMM Match : TPR_1 (HMM E-Value=3.4e-32) 28 6.6
SB_9054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_47796| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13) 27 8.7
SB_55634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 27 8.7
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 27 8.7
SB_17804| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_15566| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5)
Length = 738
Score = 25.4 bits (53), Expect(2) = 0.91
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 410 GHVTNVHWARGHNGGVS 360
GHVTN +RGH+G ++
Sbjct: 720 GHVTNTSRSRGHDGYIT 736
Score = 23.8 bits (49), Expect(2) = 0.91
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -2
Query: 467 EHWARGHNGRVSHDHGG-HQGHVT 399
E W R H R S+ HG + HVT
Sbjct: 669 ERWIREHKERTSYGHGTVTRRHVT 692
>SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 910
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 425 HGGHQGHVTNVHWARGHNGGV-SHDHRGYTRSLG 327
+G HQGH+ N +GH G V +++H TRS G
Sbjct: 777 YGAHQGHMCNGLPEKGHYGDVGAYEHAMDTRSPG 810
>SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 609
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 388 GLGATMAGSATITGATLGPSANNYRARYYDGRISNDHGR 272
GLG T G T +G L PS + Y + Y G++ G+
Sbjct: 522 GLGTTGHGLITPSGLKLAPSGDYYESARYTGQLPETAGQ 560
>SB_46831| Best HMM Match : YiaAB (HMM E-Value=8.3)
Length = 340
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVES--VEPE 241
+ +P K+P H T PL+P G TP+ H + + +P+E EPE
Sbjct: 10 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIEDHLTEPE 64
>SB_27237| Best HMM Match : MinC_C (HMM E-Value=3)
Length = 340
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVES--VEPE 241
+ +P K+P H T PL+P G TP+ H + + +P+E EPE
Sbjct: 10 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIEDHLTEPE 64
>SB_9554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVES--VEPE 241
+ +P K+P H T PL+P G TP+ H + + +P+E EPE
Sbjct: 106 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIEDHLTEPE 160
>SB_52871| Best HMM Match : Cyanate_lyase (HMM E-Value=7.8)
Length = 346
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVES--VEPE 241
+ +P K+P H T PL+P G TP+ H + + +P+E EPE
Sbjct: 106 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIEDHLTEPE 160
>SB_36099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 71 DTTRAQMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVE 226
DTT + +P K+P H T PL+P G TP+ H + + +P+E
Sbjct: 772 DTTESD--AIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIE 822
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 470 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 351
D+ R H+ R H HGG G+ + GH GG H H
Sbjct: 118 DDCDGRSHSHR--HAHGGGPGYGGDYGGGLGHCGGPGHGH 155
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 452 GHNGRVSHD-HGGHQGHVTNVHWARGHNGGVSHDHRGYT 339
G++G HD H H + + H+ GH+ G+ HD+ G+T
Sbjct: 69 GYHGYHDHDVHIHHHDYGGHDHYDGGHHDGMHHDY-GHT 106
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -2
Query: 452 GHNGRVSHDHGGHQ----GHVTNVHWARGHNGGVSHDHRGYT 339
GH+ SH++ GH GH H N G SH H G++
Sbjct: 310 GHSHGHSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHS 351
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 164 LTPLVHILININDAASATPVESVEPEQSNVEKS 262
LT H+LIN+ND PV S QS V+++
Sbjct: 597 LTDTSHLLINVNDINDNPPVFSPSAYQSRVKEN 629
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 446 NGRVSHDHGG--HQGHVTNVHWARGHNGGVSHDHRGYTR 336
+GR++ GG H+++ RG GGVS H G+ R
Sbjct: 1059 HGRLTRGDGGGASSAHISHGRLTRGDGGGVSSAHIGHGR 1097
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 220 GGSAGSIVDVNKNVDERGKLSRNEGSRRGLGMGRWELRLG 101
GGS GSI+ N+ G+++ N GS G G G R+G
Sbjct: 309 GGSGGSILIETMNMTGHGEVNVNGGSVTGSGGGGAGGRIG 348
>SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 286 NDHGRNSQAFLNI*LFRFDAFNGGSAGSIVDVNKNVDER 170
N+ G + I LFR N GS DV K+ DER
Sbjct: 23 NERGNQFSLYQKIDLFRLQCLNEAEEGSGKDVFKSWDER 61
>SB_38530| Best HMM Match : TPR_1 (HMM E-Value=3.4e-32)
Length = 803
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVE 226
+ +P K+P H T PL+P G TP+ H + + +P+E
Sbjct: 503 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIE 550
>SB_9054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVE 226
+ +P K+P H T PL+P G TP+ H + + +P+E
Sbjct: 106 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIE 153
>SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 446 NGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 342
+G SHD G H + + GH+G SHD G+
Sbjct: 5 DGVDSHDDDGDDSHDDDGDDSHGHDGVESHDGYGF 39
>SB_780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVE 226
+ +P K+P H T PL+P G TP+ H + + +P+E
Sbjct: 106 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIE 153
>SB_232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 86 QMSVLP*SKLPSSHPQSTSGPLVP-GQLTPLVHILININDAASATPVE 226
+ +P K+P H T PL+P G TP+ H + + +P+E
Sbjct: 541 ESDAIPSVKVPQEHEDDTCTPLLPSGPETPIHHDPLEVLYRLLISPIE 588
>SB_47796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 588 RGQPTTHGGHDGHVTRRAT 532
RG P HG G +TRR T
Sbjct: 4 RGDPERHGAETGRITRRTT 22
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 588 RGQPTTHGGHDGHVTRRAT 532
RG P HG G +TRR T
Sbjct: 4 RGDPQRHGAETGRITRRTT 22
>SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1483
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 455 RGHNGRVSHDHGGHQGHVTNVHWA 384
+G N + + GH HVTNV WA
Sbjct: 875 KGKNAKFKK-YPGHSAHVTNVRWA 897
>SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13)
Length = 464
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 366 GQPRSQGLH*VPRPTITGLGTMMAGSAM 283
G+P S GL P PT+T +G M A + M
Sbjct: 397 GRPHSHGLSGRPGPTLTRMGLMAALTRM 424
>SB_55634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 588 RGQPTTHGGHDGHVTRRAT 532
RG P HG G +TRR T
Sbjct: 4 RGDPERHGAETGRITRRTT 22
>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1584
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 588 RGQPTTHGGHDGHVTRRAT 532
RG P HG G +TRR T
Sbjct: 4 RGDPERHGAETGRITRRTT 22
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -2
Query: 461 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 345
W RG G + GG G + W R GG+ G
Sbjct: 24 WGRGQGGGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGG 62
>SB_17804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 588 RGQPTTHGGHDGHVTRRAT 532
RG P HG G +TRR T
Sbjct: 4 RGDPERHGAETGRITRRTT 22
>SB_15566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1265
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 434 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRS 333
S H H+G VTN ++ DHRG RS
Sbjct: 831 SDSHRDHRGVVTNDRYSYYGRSDYQRDHRGLRRS 864
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,008,602
Number of Sequences: 59808
Number of extensions: 311453
Number of successful extensions: 919
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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