Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0098
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    31   0.037
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.9  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   1.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   3.2  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   4.3  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   5.7  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 30.7 bits (66), Expect = 0.037
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 65  NVDTTRAQMSVLP*SKLPSSHPQSTSGPLVPGQLTPL 175
           N+ T    + VLP SK+P+S+P S   P+VP    P+
Sbjct: 31  NIRTGANNIGVLPASKMPTSYP-SLPAPIVPSPGAPI 66


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 431 HDHGGHQGHVTNVHWARGHNGGVSHDH 351
           H H  H G+    +   G +GG +HDH
Sbjct: 124 HHHHHHHGNNGGGNGGGGGSGGNAHDH 150



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 354 SQGLH*VPRPTITGLGTMMAGSAMITGETA 265
           + GLH +P P IT  G+ M+     TG ++
Sbjct: 152 ADGLHSIPSPPITVSGSDMSSPGAPTGSSS 181


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 568 RGTRWTRHPTSNW 530
           RG RW R PTS W
Sbjct: 22  RGRRWPRPPTSCW 34


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 73  HYESPDVGPALVEAPIVPSPVHVGTPRS-WTTYPSRPH 183
           H    D GPAL  API   P  +   ++ +   P+RP+
Sbjct: 145 HPHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPN 182


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 252  TFDCSGSTLSTGVALAASLMLIRMWTRGV 166
            T  CS     TGV +  S++L RM   GV
Sbjct: 1160 TVHCSAGVGRTGVFITLSIVLERMQYEGV 1188


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 518 VAPSPVARRVTCPSC 562
           VAP+P A+   CP+C
Sbjct: 411 VAPTPKAKTHICPTC 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,223
Number of Sequences: 2352
Number of extensions: 9923
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)