Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0098
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97015-9|AAB52349.1|  343|Caenorhabditis elegans Hypothetical pr...    33   0.12 
U21308-2|AAB93313.3|  507|Caenorhabditis elegans Hypothetical pr...    32   0.27 
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    32   0.36 
Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    31   0.47 
U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical pr...    31   0.62 
U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    31   0.62 
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    31   0.62 
U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   1.9  
U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-li...    28   5.8  

>U97015-9|AAB52349.1|  343|Caenorhabditis elegans Hypothetical
           protein F48C1.8 protein.
          Length = 343

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 467 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 342
           +H    H G   HDHGGH  H  + H    H G   HDH  +
Sbjct: 23  DHGGGDHGG---HDHGGHD-HGGHDHGGHDHGGWGGHDHHDH 60



 Score = 31.9 bits (69), Expect = 0.36
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 467 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 351
           +H    H G   HDHGG  GH  + H   G  GG  HDH
Sbjct: 38  DHGGHDHGG---HDHGGWGGHDHHDH-HHGGWGGHDHDH 72



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = -2

Query: 467 EHWARGHNGRVSHDHGGHQ--GHVTNVHWARGHNGGVSHDH 351
           +H    H G   HDHGGH   G   + H    H G   HDH
Sbjct: 33  DHGGHDHGG---HDHGGHDHGGWGGHDHHDHHHGGWGGHDH 70


>U21308-2|AAB93313.3|  507|Caenorhabditis elegans Hypothetical
           protein ZK1290.6 protein.
          Length = 507

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 470 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRS 333
           +E  + G  G     HGGH G     H   G +GG    H G+ RS
Sbjct: 41  EEQRSTGGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRS 86


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -2

Query: 470 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRG 345
           + H A  H+G    +HG H GH    H A  H+G     G  H H G
Sbjct: 508 EHHHAPAHHGHHG-EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 553



 Score = 31.5 bits (68), Expect = 0.47
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = -2

Query: 464 HWARGHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 345
           H   GH+G     HG H+ H    H     GH+G  GV H H G
Sbjct: 574 HGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617



 Score = 30.7 bits (66), Expect = 0.82
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = -2

Query: 470 DEHWARGHNGRVSH--DHGGHQGHVTNVHWARGHNGGVSHDHRG 345
           + H A  H+G   H   HG H GH  + H   GH+    H H G
Sbjct: 566 EHHHAPAHHGHHGHHGSHGVHHGHHES-H-GHGHHAPAHHGHHG 607



 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -2

Query: 467 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDH 351
           EH    H+     +HG H GH    H A  H+G   SH H
Sbjct: 408 EHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGH 447



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = -2

Query: 464 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG 327
           H   G +G     HG H     + H    H+    H H G+  S G
Sbjct: 539 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHG 584



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
 Frame = -2

Query: 449 HNGRVSHDHGGHQGHVTNVHWARGHNG--GVSHDH 351
           H+    H H G   H    H   GH+G  GV H H
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGH 589



 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -2

Query: 470 DEHWARGHNGR-VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 345
           + H A  H+G   SH HG H     + H    H+    H H G
Sbjct: 431 EHHHAPAHHGHHESHGHG-HHSPAHHGHHGEHHHAPAHHGHHG 472


>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 470 DEHWARGHNGRVSHDHG-GHQGHVTNVHWARGHNGGVSHDHRGYT 339
           D   A  H+   +HDHG  H  H  +      H+ G +HDH G++
Sbjct: 77  DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHS 121


>U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical
           protein F53A9.7 protein.
          Length = 85

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 437 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 345
           V H  GGH GHV   H    H+G     H G
Sbjct: 35  VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65


>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 467 EHWARGHN-GRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG 327
           +H   GH+ G   H H  H   H  N H   GH+ G ++D+ G++ S G
Sbjct: 366 DHNDHGHSHGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAG 413


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 467 EHWARGHN-GRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG 327
           +H   GH+ G   H H  H   H  N H   GH+ G ++D+ G++ S G
Sbjct: 384 DHNDHGHSHGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAG 431


>U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical
           protein F53A9.6 protein.
          Length = 86

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -2

Query: 464 HWARGHNGRVSHDH--GGHQGHV-TNVHWARGHNGGVSHDHRG 345
           H A G+     H H  GGH GH+ T+ H    H+GG    H G
Sbjct: 25  HGAPGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGGHHGGHHG 67



 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -2

Query: 449 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 342
           H+   SH HGGH G     H+   +     H H G+
Sbjct: 50  HHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHGH 85


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 464 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRG 345
           H +R  +    H HGGH GH +      G +G G S  HRG
Sbjct: 242 HGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 282



 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 464 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRG 345
           H +   + R  H HGGH GH +      G +G G S  HRG
Sbjct: 291 HGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 331


>U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical
           protein F53A9.1 protein.
          Length = 77

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 398 NVHWARGHNGGVSHDHRGYTRSLGQQLPG 312
           +VH   GH+ G  H H G+   LG  + G
Sbjct: 35  HVHTDGGHHHGHHHHHHGFLHELGHAMTG 63


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 463 CSSVTCPSCPPWSWLTRHCGP*PSCSSG 546
           CS   CP        T+HCG   +C+SG
Sbjct: 506 CSEDKCPGMSKSMMCTKHCGQGCACASG 533


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 463 CSSVTCPSCPPWSWLTRHCGP*PSCSSG 546
           CS   CP        T+HCG   +C+SG
Sbjct: 571 CSEDKCPGMSKSMMCTKHCGQGCACASG 598


>U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-like
           protein protein16 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 470 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 336
           D+H   GH  R S  H GHQ    + H   GH    + DH  + +
Sbjct: 141 DDH--HGHEKRSSDSHHGHQKRSVDEH--HGHQKKNAEDHHEHQK 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,248,446
Number of Sequences: 27780
Number of extensions: 210743
Number of successful extensions: 858
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)