Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0093
         (723 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81047-14|CAH04642.1|  357|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   4.4  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   4.4  
AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z81104-1|CAB70255.1|  329|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81047-14|CAH04642.1|  357|Caenorhabditis elegans Hypothetical
           protein C41G6.16 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -2

Query: 554 YIIMINAAVFYQIEYT-KY*QLLLVYV*DICTKLSNSIAGHIFILQSNLFSFTSTYILIK 378
           Y I +N   F  +EY  KY  L++V +      LSN +  H  IL+ N+     T+I+IK
Sbjct: 32  YAIHLNFLNF-DVEYAIKYPNLIIVML----GMLSNIL--HFLILRGNILKHNPTFIMIK 84

Query: 377 II 372
           ++
Sbjct: 85  VV 86


>Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical
           protein K03D7.9 protein.
          Length = 211

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 528 ILSNRIYEILTATTGLCLRHMYQIIK 451
           ++ N I+ I+T T+GL   H+YQ++K
Sbjct: 95  VVYNFIFFIMTLTSGLFYYHLYQLLK 120


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 537 INHNN-IFHSIFTHIPTESGLKKVQVKIITT 626
           IN NN  FH IFT + +E+G+    VK + T
Sbjct: 853 INSNNEAFHRIFTQVTSENGVVAESVKKLVT 883


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 537 INHNN-IFHSIFTHIPTESGLKKVQVKIITT 626
           IN NN  FH IFT + +E+G+    VK + T
Sbjct: 853 INSNNEAFHRIFTQVTSENGVVAESVKKLVT 883


>AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical
           protein Y75B12B.10 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 524 YQIEYT-KY*QLLLVYV*DICTKLSNSIAGHIFILQSNLFSFTSTYILIKII 372
           + +EY  KY  L++V +      LSN +  H  IL+ N+     T+I+IK++
Sbjct: 16  FDVEYAIKYPNLIIVML----GMLSNIL--HFLILRGNILKHNPTFIMIKVV 61


>Z81104-1|CAB70255.1|  329|Caenorhabditis elegans Hypothetical
           protein M199.1 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -2

Query: 611 YLDFFQTRFGRYVSEYRMKYIIMINAAVFYQ-IEYTKY*QLLLVYV*DICTKLSNSIAGH 435
           +L +  T FG ++    + YI +IN     + I++T Y  ++L+ V D+C    + I   
Sbjct: 35  WLGYPITVFGIFIE---LLYIPIINIIFKTKLIKHTCYKIIVLLAVTDMCATACSCIITG 91

Query: 434 IFILQSNLFSFTSTYILI 381
           I ++Q  +F    T+I I
Sbjct: 92  ILLIQGAVFCVYPTFIYI 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,653,122
Number of Sequences: 27780
Number of extensions: 283682
Number of successful extensions: 539
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)