Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0090
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.29 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   0.88 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   0.88 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   6.2  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   6.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.2  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 368 RSCNNYWRCQ 397
           +SCN YW+CQ
Sbjct: 168 KSCNRYWQCQ 177


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 365 HRSCNNYWRC 394
           H SC+ YW+C
Sbjct: 35  HTSCDKYWKC 44


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 365 HRSCNNYWRC 394
           H SC+ YW+C
Sbjct: 35  HTSCDKYWKC 44


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 275 PQDAAENRISPS 240
           PQD A N ISPS
Sbjct: 355 PQDGAGNLISPS 366


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 582 KLCSLKIVKK 611
           KLC +KIVKK
Sbjct: 366 KLCGMKIVKK 375


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 209 FPEFQHQSVPLKEKSDFQPRPEV 277
           FPEF H  +   + +   P P V
Sbjct: 69  FPEFVHSGMVHNDGTQLMPSPTV 91


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 209 FPEFQHQSVPLKEKSDFQPRPEV 277
           FPEF H  +   + +   P P V
Sbjct: 69  FPEFVHSGMVHNDGTQLMPSPTV 91


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 221 QHQSVPLKEKSDFQPRPE 274
           +H S P ++ ++  P PE
Sbjct: 206 KHHSFPFRKTTEIPPEPE 223


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 155 CICVVSATSAPDST*SWLF 211
           C C  S +  P ST  W F
Sbjct: 554 CYCYYSISIRPISTLGWFF 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,695
Number of Sequences: 336
Number of extensions: 2284
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)