Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0090
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 32 0.31
06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776 31 0.54
12_01_0506 + 4017568-4017716,4018171-4018474 30 1.3
12_01_0204 + 1539859-1540158 30 1.3
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420... 29 2.2
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 29 2.9
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239... 29 3.8
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 29 3.8
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 28 5.1
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 28 6.7
01_06_0034 + 25769436-25769701,25769749-25769887 28 6.7
12_02_0959 + 24818310-24818369,24818689-24819136,24819265-248194... 27 8.9
12_02_0281 + 16744690-16744727,16744744-16745611,16746195-167467... 27 8.9
12_01_0149 - 1150949-1151041,1151145-1151190,1151343-1151460,115... 27 8.9
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 27 8.9
05_06_0263 + 26752759-26754393 27 8.9
05_05_0321 + 24091997-24092530 27 8.9
05_03_0459 - 14284513-14286336 27 8.9
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 27 8.9
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 27 8.9
>03_05_1122 +
30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -2
Query: 437 SNFASEEIDLEVRFDIANSYCSSDVTDN---DVVCEGDGSGSLSNDVLKGKSSGSER--- 276
SN +D E +A C D+ + D++ EGD G L+ D + G
Sbjct: 54 SNSMKMHVDAETAGGVALDVCKGDILEKKQCDIIAEGDRGGVLTVDTCNAEEDGEVTGAV 113
Query: 275 PQDAAENRISPSAEPTDAETLGTARTKLS 189
DA + SA + E+LG A +++
Sbjct: 114 VSDAVVEAVRCSA--NNVESLGLAEVEIA 140
>06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776
Length = 833
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 409 WRLDLTSPIVIAAPMSLTMMLSARETEAVAS-ATTFSRASPPEAKDLRTRLKIGFLLQRN 233
WR T +A S++ AR AV ++ F ++PP +D+R L F ++R
Sbjct: 124 WRSSATKATGVATAGSVSSRRRARRAAAVTRRSSAFPSSTPPTQEDVRRGLDARFNIERR 183
Query: 232 R 230
R
Sbjct: 184 R 184
>12_01_0506 + 4017568-4017716,4018171-4018474
Length = 150
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -2
Query: 506 TADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGS 327
T +L V+ + ++ DG ++ ++ E D+E++ D Y + DV + V E GS
Sbjct: 72 TGELDVAYIYVEEPEIVDLCDGSADNSNYEADMELKVDSEEEYVNMDVEVD--VGEATGS 129
Query: 326 GSLSNDVLK-GKSSGS 282
G V + G++SGS
Sbjct: 130 GCKGKAVEEHGEASGS 145
>12_01_0204 + 1539859-1540158
Length = 99
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 64 YAGSWSPPGASDIINFSGRVTDVKADD 144
+AGSW+ G + +F GRVT V+ D
Sbjct: 38 HAGSWNGEGQGGLAHFGGRVTRVRRGD 64
>11_01_0532 +
4201374-4201401,4201475-4202652,4204316-4204670,
4204791-4204864,4206965-4207056,4207500-4207573,
4207680-4207822,4207889-4207909
Length = 654
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 371 SDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQ-DAAENRISPSAEPTDAETLGTAR 201
SD +D+ V E D S ++ D +G+E P D E + PSAEP A + T R
Sbjct: 42 SDDSDSAAVNEDDDS-AVPEDADDETLAGAEDPVLDLREAEVLPSAEPVSAFPVATRR 98
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -2
Query: 323 SLSNDVLKGKSSGSERPQ-DAAENRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCREL 147
SL +++ K+ E Q D ++N P+ P A L K + T ++ R+
Sbjct: 455 SLKSELPADKTIEKEYMQTDCSQNNRKPNELPLSAPVL-----KNQILGTIDPQKDARQS 509
Query: 146 KSSALTSVTRPEKLMMSDAPGGLQEPA*PSRRR 48
KSS + T E++++SD+ E PSR R
Sbjct: 510 KSSIQQNTTPVERIVVSDSEDSADECERPSRSR 542
>02_01_0336 +
2397648-2397812,2398367-2398441,2398860-2398975,
2399155-2399269,2399360-2399488,2399809-2399856,
2400369-2400448,2400628-2400824,2400916-2401202,
2401281-2401307,2401353-2401538,2401633-2402094,
2402201-2402350,2402612-2402687,2402851-2402978,
2403244-2403435,2403559-2403690,2403767-2403889,
2404128-2404346,2404518-2404679
Length = 1022
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 329 SGSLSNDVLKGKSSGSERPQDAAENRISPSAEPTDAETLGTARTKLSR 186
S +L + + + K S E+PQD + NR+S +A+ D T+ + SR
Sbjct: 544 SAALFDKLKRDKESFREKPQDGSMNRLSHAAD-NDTSTVKDMPSSRSR 590
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 209 FPEFQHQSVPLKEKSDFQPRPEVFRFRRTCP*ERR 313
FP FQH S L EK+ FQ + +F+ C ER+
Sbjct: 738 FPPFQHPSHQLLEKNKFQ-QQRYNKFKNRCIAERK 771
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 429 EVGPAVNNFLEKIPVYLTDYAAEVSRVWSTSPNSSSTDYCKLLERYL*IKNKLCSLKIV 605
+V + +NF+ P + E + S SPN+S Y +LE + +LC KIV
Sbjct: 810 DVDHSKSNFMFHSPFVGEEVGIEKKIIASVSPNNSDVQYKVMLEHR--VLRRLCVQKIV 866
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 368 DVTDNDVVCEG---DGSGSLSNDVLKGKSSGSERPQDAAENRISPSAEP 231
D+ +NDVVC G +L + ++ G+S ++ +A +P+ P
Sbjct: 337 DIVNNDVVCSGFLPTAEPTLRDGIVAGESPSTQHLSNATTEAKTPTKSP 385
>01_06_0034 + 25769436-25769701,25769749-25769887
Length = 134
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 368 DVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 258
+V +D +C+G+G G + G ++ RPQ A E
Sbjct: 16 EVESSDTICQGEGPGEGGHPDPAGPAAALLRPQVAGE 52
>12_02_0959 +
24818310-24818369,24818689-24819136,24819265-24819482,
24819651-24819929
Length = 334
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -2
Query: 368 DVTDNDVV---CEGDGSGSLSNDVLKGKSSGSER 276
++ +ND++ C G G+GS S DVL +SG E+
Sbjct: 73 ELQENDLLFFTCNGHGNGSCSFDVLIFDASGCEK 106
>12_02_0281 +
16744690-16744727,16744744-16745611,16746195-16746725,
16747737-16748549
Length = 749
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -3
Query: 532 DELGDVLQTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM 353
DE+ +++ RL S+ G F+R LL G + L W LD + + P+S
Sbjct: 562 DEMLFIIRGRLESSTTDGGRMGFFNRGLLKEGDFCGEELLTWALDPKAAANL--PLSTRT 619
Query: 352 MLSARETEAVA 320
+ + E EA A
Sbjct: 620 VKAISEVEAFA 630
>12_01_0149 -
1150949-1151041,1151145-1151190,1151343-1151460,
1151541-1151637,1151711-1151908,1152024-1152086,
1152384-1152443,1152558-1152660,1154398-1154507
Length = 295
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -2
Query: 443 GWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSE 279
GWSN D D+A + S + +D+ E +L D+LK + SE
Sbjct: 66 GWSNLVCSREDHAKSVDVAVLFLGSKLQSSDISKEKQADSTLV-DMLKNSFASSE 119
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 472 TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVA 320
TG F+ +L G + L W LD TS V + P S + + E EA A
Sbjct: 564 TGFFNSDVLKGGDFCGEELLTWALDPTS--VSSLPSSTRTVKTMSEVEAFA 612
>05_06_0263 + 26752759-26754393
Length = 544
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +3
Query: 396 KSNLQINLFGREVGPAVNNFLEKIP----VYLTDYAAE 497
K +L+ NLFG E G A++ L K+P +YL+D E
Sbjct: 331 KLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLE 368
>05_05_0321 + 24091997-24092530
Length = 177
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/82 (21%), Positives = 32/82 (39%)
Frame = -2
Query: 482 RQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVL 303
RQV R E++ S+F+ + + ++ D +N GDG G +
Sbjct: 15 RQVGRSREEELLGLLSDFSGDSGEFGRELSFSDLVVVEDTANNPSPRGGDGGGDRAAPTA 74
Query: 302 KGKSSGSERPQDAAENRISPSA 237
+G RP ++E + A
Sbjct: 75 AAAENGQARPSSSSEQEEAAEA 96
>05_03_0459 - 14284513-14286336
Length = 607
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 329 SGSLSNDVLKGKSSGSERPQDAAENRISPSAE-PTDAETLGTARTKL 192
S S S+ G SS SER D+A +R +A+ PT+AE KL
Sbjct: 426 SDSSSSSSCSGSSSSSER-NDSASSRPDTTADHPTEAEVKPMEEQKL 471
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -2
Query: 398 FDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGK--SSGSERPQDAAENRISPSAEPT 228
F+ + D D D+ C G G +ND +KG GS + Q ++ + I+ T
Sbjct: 213 FEFTGMSTNQDDADEDIFCTGGGMELENNDSVKGDKVQDGSFKSQISSGHSINKQPSRT 271
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 353 DVVCEGDGSGSLSNDVLKGKSSGSERPQDAA 261
+V C G G G+++ D +G SG R DAA
Sbjct: 120 NVGCIGGGGGNITVDGFRGGGSGGGRGGDAA 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,058,700
Number of Sequences: 37544
Number of extensions: 300464
Number of successful extensions: 1110
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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