Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0090
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L08825-1|AAA28914.1|  723|Drosophila melanogaster single-strande...    29   4.9  
BT028793-1|ABI34174.1|  783|Drosophila melanogaster IP13829p pro...    29   4.9  
AE014297-2725|AAG22156.2|  980|Drosophila melanogaster CG4733-PA...    29   4.9  

>L08825-1|AAA28914.1|  723|Drosophila melanogaster single-stranded
           recognition proteinprotein.
          Length = 723

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -2

Query: 446 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 276
           DG S+  S + D    E   D+A  Y S++ +D+D   +  G G  S+   K K   SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEK 528

Query: 275 PQ 270
            +
Sbjct: 529 KE 530


>BT028793-1|ABI34174.1|  783|Drosophila melanogaster IP13829p
           protein.
          Length = 783

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/105 (20%), Positives = 43/105 (40%)
 Frame = -2

Query: 404 VRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENRISPSAEPTD 225
           V  D+ +   ++ + ++  V +  G  + +     G    S+  + +A+++ +   +PT 
Sbjct: 186 VSLDVVDGPSAARIANSTAVSDKGGEPAAT-----GSRKSSKTKETSADSKPATKEKPTA 240

Query: 224 AETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDA 90
             T+  AR   SR+ T           ++A TS T        DA
Sbjct: 241 VATVANARKSTSRIATDNAGNMAAATAAAAATSATSAATATSMDA 285


>AE014297-2725|AAG22156.2|  980|Drosophila melanogaster CG4733-PA
           protein.
          Length = 980

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/105 (20%), Positives = 43/105 (40%)
 Frame = -2

Query: 404 VRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENRISPSAEPTD 225
           V  D+ +   ++ + ++  V +  G  + +     G    S+  + +A+++ +   +PT 
Sbjct: 291 VSLDVVDGPSAARIANSTAVSDKGGEPAAT-----GSRKSSKTKETSADSKPATKEKPTA 345

Query: 224 AETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDA 90
             T+  AR   SR+ T           ++A TS T        DA
Sbjct: 346 VATVANARKSTSRIATDNAGNMAAATAAAAATSATSAATATSMDA 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,739,781
Number of Sequences: 53049
Number of extensions: 487557
Number of successful extensions: 1872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1870
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)