Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0090
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.77 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.4  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   7.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 423 GREVGPAVNNFLEKIPVYLTDYAAEVSRVWSTSPNS 530
           GR V P     L+     L   A EV  +W  +P+S
Sbjct: 386 GRSVNPRYYGSLQAAARKLLGNAPEVENIWDYTPSS 421


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 541 ITVNYSNDTCESKINYVL 594
           I  N S D CE+ +N+++
Sbjct: 119 INANKSTDKCENGLNFII 136


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 529 RHQQITVNYSNDTCESKINY 588
           RH ++    + D C+ +INY
Sbjct: 209 RHMEVIKIKNFDNCDQRINY 228


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 341 EGDGSGSLSNDVLKGKSSGSERP 273
           EG G  SL   + +G+ +G+E P
Sbjct: 731 EGSGGDSLRTLLQRGQETGAEWP 753


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +2

Query: 371 SCNNYW 388
           SCNNYW
Sbjct: 100 SCNNYW 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,248
Number of Sequences: 438
Number of extensions: 2712
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)