Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0089
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 32 0.44
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.58
SB_25379| Best HMM Match : Keratin_B2 (HMM E-Value=2.5) 31 0.77
SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20) 31 1.3
SB_50253| Best HMM Match : HYR (HMM E-Value=2.6e-20) 30 2.3
SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_56781| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5) 25 4.7
SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07) 29 5.4
SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 29 5.4
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 28 7.2
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 28 9.5
SB_19355| Best HMM Match : MFS_1 (HMM E-Value=1.8e-22) 28 9.5
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 9.5
SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3) 28 9.5
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 28 9.5
SB_8396| Best HMM Match : Spb1_C (HMM E-Value=0.65) 28 9.5
>SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 910
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 385 HGGHQGHVTNVHWARGHNGGV-SHDHRGYTRSLGNNYR 275
+G HQGH+ N +GH G V +++H TRS G Y+
Sbjct: 777 YGAHQGHMCNGLPEKGHYGDVGAYEHAMDTRSPGYPYK 814
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 126 LTPLVHILININDAASATPVESVEPEQSNVEEK-PAVSPVIIADLPS 263
LT H+LIN+ND PV S QS V+E PA + V D S
Sbjct: 597 LTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQVSATDRDS 643
>SB_25379| Best HMM Match : Keratin_B2 (HMM E-Value=2.5)
Length = 442
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 72 EAPIVPSPVHVGPLVPGQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVS 236
+ PI P P + + G L +++++ND +A PVE+V+ +Q++ + K S
Sbjct: 348 KGPISPDPA-IMEEIDGLSNTLDDLILSLNDVDTAEPVENVDIDQADADCKALYS 401
>SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20)
Length = 591
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Frame = -3
Query: 418 ARGHNGRVS---HDHGGHQ-GHVTNV----HWARGHNGGVSHDHRGYTRSLGNNYRARYY 263
A G G VS H G H GHVT + HW G + G + N + +R Y
Sbjct: 341 ASGRTGPVSLGSHYLGKHHDGHVTLINGIQHWTVAVTGKYRIEAVGASGGYDNQFNSRSY 400
Query: 262 DGRSAMITG 236
R A ITG
Sbjct: 401 RSRGARITG 409
>SB_50253| Best HMM Match : HYR (HMM E-Value=2.6e-20)
Length = 525
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 259 GRSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIRMWTRGVSCPGTRGPTWTGDGTM 80
G+ ITG S ++C+GS S G A+A + + + + GV+ G G + T
Sbjct: 419 GKKLTITGALKENSGLYECTGSN-SWGNAIAVASLTVEISGSGVAV-GDEGQSLTVHRHN 476
Query: 79 GASTRAGPTSGL 44
S R TSGL
Sbjct: 477 VTSLRHHVTSGL 488
>SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Frame = +3
Query: 9 AAAVPAKRGHYESPDVGPALVE-APIVPSPVHVGPLVPGQ-----LTPLVHILININDAA 170
A + P K ES V VE AP+ +P+ P P + TP+ L+
Sbjct: 62 AESAPVKYTPVESVPVKHTPVESAPVKYTPMESAPYTPVESKPVKYTPVQSALVKYTPVE 121
Query: 171 SA----TPVESVEPEQSNVEEKP 227
SA TPVES + + VE KP
Sbjct: 122 SAPVKYTPVESAPVKYTPVESKP 144
>SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 248 NDHGRNSRLFFNI*LFRFDAFNGGSAGSIVDVNKNVDER 132
N+ G L+ I LFR N GS DV K+ DER
Sbjct: 23 NERGNQFSLYQKIDLFRLQCLNEAEEGSGKDVFKSWDER 61
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Frame = -3
Query: 418 ARGHNGRVSHDHGG----HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRS 251
+R +G DHGG H G + R +GG DH G R G R GR
Sbjct: 2 SRRDHGSTRRDHGGTGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGRD 61
Query: 250 AMITGETAG 224
TG G
Sbjct: 62 HGGTGRDHG 70
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -3
Query: 415 RGHNGRVSHDHGGHQ---GHVTNVHWARGHN-GGVSHDHRGYTRSLGNNYRARYYDGRSA 248
R H G DHGG + G H G + GG DH G R G R GR
Sbjct: 11 RDHGG-TGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDH 69
Query: 247 MITGETAG 224
TG G
Sbjct: 70 GGTGRDHG 77
>SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/76 (31%), Positives = 31/76 (40%)
Frame = -3
Query: 406 NGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRSAMITGETA 227
+G SHD G H + + GH+G SHD G+ Y Y + +TG
Sbjct: 5 DGVDSHDDDGDDSHDDDGDDSHGHDGVESHDGYGF-------YNVYYNGDPKSSVTGHIR 57
Query: 226 GFSSTFDCSGSTLSTG 179
TFD GS S G
Sbjct: 58 P-DGTFD--GSFFSAG 70
>SB_56781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -3
Query: 421 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR-SLGNNYRARYYDGRSAM 245
+ RG G G +G R + GG + RGYTR + G R Y +
Sbjct: 55 YTRGTRGFTGGTRGFTRGTRGYTRGTRRYTGGYTRGTRGYTRGTRGYTGGTRGYTRGTRR 114
Query: 244 ITGETAGFS 218
TG T G++
Sbjct: 115 YTGGTRGYT 123
Score = 28.3 bits (60), Expect = 7.2
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = -3
Query: 385 HGGHQGHVTNVHWARGHNGGVSHDHRGYT-RSLGNNYRARYYDGRSAMITGETAGFS-ST 212
HGG +G+ +RG+ GG RGYT + G R Y G + +T T G++ T
Sbjct: 7 HGGTRGYTGG---SRGYTGGT----RGYTGGTRGYTGGTRGYTGGTRGLTRGTRGYTRGT 59
Query: 211 FDCSGSTLSTGVALAASLMLIRMWTRGVSCPGTRGPTWTGDGTMGAS 71
+G T R +T G + GTRG T G G +
Sbjct: 60 RGFTGGTRGFTRGTRGYTRGTRRYTGGYT-RGTRGYTRGTRGYTGGT 105
Score = 28.3 bits (60), Expect = 7.2
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Frame = -3
Query: 418 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR-SLGNNYRARYYDGRSAMI 242
+RG+ G GG +G+ G G++ RGYTR + G R + +
Sbjct: 17 SRGYTGGTRGYTGGTRGYTGGTRGYTGGTRGLTRGTRGYTRGTRGFTGGTRGFTRGTRGY 76
Query: 241 TGETAGFSS--TFDCSGSTLSTGVALAASLMLIRMWTRGVS--CPGTRGPTWTGDGTMGA 74
T T ++ T G T T + R +TRG GTRG T G G
Sbjct: 77 TRGTRRYTGGYTRGTRGYTRGTRGYTGGT----RGYTRGTRRYTGGTRGYTGGTRGYTGG 132
Query: 73 STRA--GPTSGL 44
TR G T+G+
Sbjct: 133 YTRGTRGYTNGI 144
>SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5)
Length = 738
Score = 25.4 bits (53), Expect(2) = 4.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 370 GHVTNVHWARGHNGGVS 320
GHVTN +RGH+G ++
Sbjct: 720 GHVTNTSRSRGHDGYIT 736
Score = 21.8 bits (44), Expect(2) = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = -3
Query: 421 WARGHNGRVSHDHGG-HQGHVT 359
W R H R S+ HG + HVT
Sbjct: 671 WIREHKERTSYGHGTVTRRHVT 692
>SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07)
Length = 287
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = -3
Query: 418 ARGHNGRVS---HDHGGHQ-GHVTNV----HWARGHNGGVSHDHRGYTRSLGNNYRARYY 263
A G G VS H G H GHVT V HW G + G + N +R Y
Sbjct: 53 ASGRTGPVSLGSHYLGKHHDGHVTLVNGTQHWTVDVTGKYRIEAVGASGGYDNQSNSRSY 112
Query: 262 DGRSAMITG 236
R A ITG
Sbjct: 113 RSRGARITG 121
>SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -3
Query: 418 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 278
A GH ++H H H A H G++H H T+ L ++Y
Sbjct: 214 AHGHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSH---TKGLAHSY 257
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQ----GHVTNVHWARGHNGGVSHDHRGYT 299
GH+ SH++ GH GH H N G SH H G++
Sbjct: 310 GHSHGHSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHS 351
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 406 NGRVSHDHGG--HQGHVTNVHWARGHNGGVSHDHRGYTR 296
+GR++ GG H+++ RG GGVS H G+ R
Sbjct: 1059 HGRLTRGDGGGASSAHISHGRLTRGDGGGVSSAHIGHGR 1097
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 415 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 311
R H+ R H HGG G+ + GH GG H H
Sbjct: 123 RSHSHR--HAHGGGPGYGGDYGGGLGHCGGPGHGH 155
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 51 DVGPALVEAPIVPSPVHVGP-LVPG--QLTPLV-HILININDAASATP-VESVEPEQSNV 215
++ PA V +VP PV +GP ++P ++ P V ++ + + A P V PE V
Sbjct: 16 EIRPAEVVQEVVPPPVAIGPEILPAVPEIVPAVPEVVPAVPEIVPAVPEVVPAVPEVVPV 75
Query: 216 --EEKPAVSPVIIA 251
E +PAV V+ A
Sbjct: 76 VPEVEPAVPEVVPA 89
>SB_19355| Best HMM Match : MFS_1 (HMM E-Value=1.8e-22)
Length = 572
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 177 TPVESVEPEQSNVEEKPAVSPVIIADLPS 263
T +E +E Q++V KPA +P+ ++ LP+
Sbjct: 535 TALEPIEEVQADVSAKPADTPMRVSSLPT 563
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 159 NDAASATPVESVEPEQSNVEEKPAVSPVIIADLP 260
+D TPVE+ E EQS+++ + P+ D P
Sbjct: 735 DDQDHKTPVETTETEQSDMDTSESYDPIAPTDDP 768
>SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3)
Length = 861
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = -3
Query: 418 ARGHNGRVSHDHGG---HQGHVTNVHWA-RGHNGGVSHDHRGYTRSLGNNYRARYYDGRS 251
+RG+ G + +GG H G T + H GG + + G+TR G+ R+Y G +
Sbjct: 328 SRGNTGGFTRHYGGFTRHYGGFTRHYGVFTRHYGGFTRHYGGFTRHYGD--FTRHYGGFT 385
Query: 250 AMITGETAGFSS-TFDCSGSTLSTGV 176
G T + T G T GV
Sbjct: 386 RHYGGFTRHYGGFTRHYGGFTRHYGV 411
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 174 ATPVESVEPEQSNVEEKPAVSP 239
+TPV + EP++ EEKP+ SP
Sbjct: 1480 STPVATPEPKKEEPEEKPSPSP 1501
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 391 HDHGGHQGHVTNVHWARGHNGGVSHDHRGYT 299
HD+GGH H+ GH+ G+ HD+ G+T
Sbjct: 83 HDYGGHD------HYDGGHHDGMHHDY-GHT 106
>SB_8396| Best HMM Match : Spb1_C (HMM E-Value=0.65)
Length = 1007
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 114 VPGQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVS 236
+ G L +++++ND +A PVE+V+ +Q++ + K S
Sbjct: 4 IDGLSNTLDDLILSLNDVDTAEPVENVDIDQADADCKALYS 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,978,064
Number of Sequences: 59808
Number of extensions: 302789
Number of successful extensions: 1042
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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