Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0089
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 36 0.024
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 33 0.17
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 33 0.17
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.67
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.89
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 31 0.89
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 31 0.89
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 30 2.1
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 30 2.1
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 30 2.1
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical pr... 29 3.6
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 3.6
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 3.6
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 3.6
AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical ... 29 3.6
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.7
Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical pr... 28 6.3
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 28 6.3
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRSAMITGE 233
G G HGGH G H G +GG H G+ RS + + Y G S+ T
Sbjct: 47 GGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRGLSSGST-- 104
Query: 232 TAGFSSTFDCSGSTLSTG 179
+S + + S STG
Sbjct: 105 NTSYSKSTPRTNSGYSTG 122
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 HNGRVSH--DHGGHQGHVTNVHWARGHNG--GVSHDHRGYTRSLGNNYRARYYDGRSAMI 242
H G SH +GGH GH + + G +G G+S G T + + R G S
Sbjct: 67 HGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRGLS---SGSTNTSYSKSTPRTNSGYSTGK 123
Query: 241 TGETAGFSSTFDCSGSTLST 182
T +TA S + + ST ST
Sbjct: 124 TTKTASSSRNYSNTSSTRST 143
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -3
Query: 412 GHN-GRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDG 257
GH+ G H H H H N H GH+ G ++D+ G++ S G +N+ +DG
Sbjct: 371 GHSHGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAGSDNHHGHSHDG 424
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 412 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNN 281
GH H DHG GH + H + GH+ + HDH G++ GNN
Sbjct: 360 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHG-GNN 403
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -3
Query: 412 GHN-GRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDG 257
GH+ G H H H H N H GH+ G ++D+ G++ S G +N+ +DG
Sbjct: 389 GHSHGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAGSDNHHGHSHDG 442
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 412 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNN 281
GH H DHG GH + H + GH+ + HDH G++ GNN
Sbjct: 378 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHG-GNN 421
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 409 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDG 257
H+ H H G H H GH+G SH H G+ S G+ + A + G
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHG--SHGVHHGHHESHGHGHHAPAHHG 604
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 305
GH+G HG H+ H H GH+G GV H H G
Sbjct: 578 GHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRG 305
GH+G +HG H GH H A H+G G H H G
Sbjct: 517 GHHG----EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 553
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 397 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 305
V H GGH GHV H H+G H G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -3
Query: 412 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYRARYYDGRSAM 245
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+ + RS+M
Sbjct: 76 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQQQ---RRSSM 132
Query: 244 ITGETAG 224
G +G
Sbjct: 133 SAGSESG 139
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -3
Query: 412 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYRARYYDGRSAM 245
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+ + RS+M
Sbjct: 580 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQQQ---RRSSM 636
Query: 244 ITGETAG 224
G +G
Sbjct: 637 SAGSESG 643
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -3
Query: 412 GHNGRVSHDHGG------HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 257
G G SH HGG H H H+ G G H H Y+ S + YY G
Sbjct: 179 GGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGFHHHHHSSYSGSSSDYSSNNYYGG 236
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 311
GH+ HDHGG GH + H G GG HDH
Sbjct: 41 GHD-HGGHDHGGWGGHDHHDH-HHGGWGGHDHDH 72
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -3
Query: 388 DHGG--HQGHVTNVHWARGHNGGVSHDHRGY 302
DHGG H GH H GH+ G HDH G+
Sbjct: 23 DHGGGDHGGHDHGGHDHGGHDHG-GHDHGGW 52
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -3
Query: 391 HDHGGHQ--GHVTNVHWARGHNGGVSHDH 311
HDHGGH GH H G G HDH
Sbjct: 32 HDHGGHDHGGHDHGGHDHGGWGGHDHHDH 60
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQ--GHVTNVHWARGHNGGVSHDH 311
GH+ HDHGGH G + H H G HDH
Sbjct: 36 GHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDH 70
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 412 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 302
GH+ HDHGGH H H G HDH +
Sbjct: 31 GHD-HGGHDHGGHD------HGGHDHGGWGGHDHHDH 60
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1273 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1310
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1295 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1332
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1086 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1123
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1393 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1430
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1273 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1310
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1295 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1332
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1086 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1123
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1393 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1430
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1104 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1141
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 409 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 302
H+ SH HGGH G H+ + H H G+
Sbjct: 50 HHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHGH 85
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 391 HDHGGHQGHV-TNVHWARGHNGGVSHDHRG 305
H GGH GH+ T+ H H+GG H G
Sbjct: 38 HTDGGHHGHMDTHHHHDSHHHGGHHGGHHG 67
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GQLTPLVHILININDAASATPVESVEPEQSNVEEKPAVSP 239
GQ T +HIL + ATP S PE + E P++SP
Sbjct: 1064 GQRTSQLHILSTEEEVLQATPPSS--PENKSSEVPPSISP 1101
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -3
Query: 394 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY---RARYYDGRSAMITGETAG 224
+HDHG H + H+ G +HDH G++ ++ A + G S G + G
Sbjct: 75 AHDHG----HAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHSHG 130
Query: 223 FSSTFDCSGSTLSTGVALAASLMLIRMWTRGVS 125
S TG + R+W +S
Sbjct: 131 AESAKQVGDEYQYTGFLSFLNDAKTRLWVYAIS 163
>Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.5 protein.
Length = 233
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Frame = -3
Query: 415 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN-----YRARYYDGRS 251
+GHNG G G+ T+ RG G HR T + + Y Y DG S
Sbjct: 159 KGHNGNTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDGSS 218
Query: 250 AMITGETAGFSSTF 209
TA ++ F
Sbjct: 219 TFTCRATASYTVQF 232
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 4 P*LPPCRPNVDTTRAQMSVLP*SKLPSSHPQSTSDPSFL 120
P LPP RP V TT + P + +P++ P S PSFL
Sbjct: 998 PPLPP-RPKVKTTAVDET--PQNLVPNNQPAQPSSPSFL 1033
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 4 P*LPPCRPNVDTTRAQMSVLP*SKLPSSHPQSTSDPSFL 120
P LPP RP V TT + P + +P++ P S PSFL
Sbjct: 998 PPLPP-RPKVKTTAVDET--PQNLVPNNQPAQPSSPSFL 1033
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 4 P*LPPCRPNVDTTRAQMSVLP*SKLPSSHPQSTSDPSFL 120
P LPP RP V TT + P + +P++ P S PSFL
Sbjct: 998 PPLPP-RPKVKTTAVDET--PQNLVPNNQPAQPSSPSFL 1033
>AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical
protein Y64G10A.6 protein.
Length = 846
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 42 ESPDVGPALVEAPIVPSPVHVGPLVPGQLTPLVHILINI-NDAASATPVESVEPEQSNVE 218
+S DV L + P P+HV P P L P + D V+SVE + + +E
Sbjct: 722 DSEDV-KLLEDVKCAPGPIHVEPTEPEVLEPAEEPMEEAEEDEEDEDDVDSVEGQTARIE 780
Query: 219 E 221
E
Sbjct: 781 E 781
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 400 RVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRG 305
R H HGGH GH + G +G G S HRG
Sbjct: 299 RGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 331
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 391 HDHGGHQGHVTNVHWARGHNG-GVSHDHRG 305
H HGGH GH + G +G G S HRG
Sbjct: 253 HGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 282
>Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.3 protein.
Length = 233
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Frame = -3
Query: 415 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN-----YRARYYDGRS 251
+GHNG+ G G+ T+ RG G HR T + + Y Y DG S
Sbjct: 159 KGHNGKTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDGSS 218
Query: 250 AMITGETAGFSSTF 209
+A ++ F
Sbjct: 219 TFTCQPSASYTVQF 232
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -3
Query: 124 CPGTRGPTWTGDGTMGAST----RAGPTSGLS*CPRLA 23
CP T G T T +ST R PT+G+S CP A
Sbjct: 171 CPRTCGRCSTSSSTTSSSTTCADRVNPTTGVSDCPARA 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,381,549
Number of Sequences: 27780
Number of extensions: 224070
Number of successful extensions: 938
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -