Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0088
(591 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 116 4e-25
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 116 5e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 107 2e-22
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 107 2e-22
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 107 3e-22
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 106 3e-22
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 106 4e-22
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 103 2e-21
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 100 3e-20
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 98 1e-19
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 95 8e-19
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 95 1e-18
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 91 2e-17
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 90 3e-17
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 89 7e-17
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 86 7e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 79 8e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 79 1e-13
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 78 2e-13
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 76 5e-13
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 74 2e-12
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 74 3e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 72 9e-12
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 72 1e-11
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 70 4e-11
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 6e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 69 6e-11
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 69 6e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 69 8e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 69 1e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 69 1e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 68 1e-10
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 68 1e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 67 3e-10
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 67 3e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 67 3e-10
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 66 3e-10
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 67 3e-10
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 66 4e-10
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 66 6e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 66 8e-10
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 65 1e-09
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 65 1e-09
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 64 2e-09
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 64 2e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 64 3e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 64 3e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 64 3e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 62 7e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 62 9e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 62 1e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 61 2e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 61 2e-08
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 60 3e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 60 3e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 60 4e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 60 5e-08
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 60 5e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 59 7e-08
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 59 9e-08
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 58 2e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 58 2e-07
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 57 3e-07
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 57 4e-07
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 57 4e-07
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 56 5e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 56 5e-07
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 56 8e-07
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 54 2e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 53 6e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 8e-06
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 52 8e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 52 1e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 52 1e-05
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 52 1e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 51 2e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 50 3e-05
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 50 5e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 50 5e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 49 9e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 48 1e-04
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 47 3e-04
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 47 4e-04
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 47 4e-04
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 44 0.002
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.014
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 41 0.019
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 41 0.025
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 40 0.044
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.058
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 39 0.076
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.076
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 39 0.10
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.23
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 37 0.41
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.54
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.54
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.54
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.71
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 0.94
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 0.94
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 35 1.2
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 1.6
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 1.6
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.2
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 33 5.0
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 5.0
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 6.6
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 6.6
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 32 8.7
UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY0608... 32 8.7
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 116 bits (279), Expect = 4e-25
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV+LANSS+DI LHDTYYVVAHFH
Sbjct: 23 KIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFH 82
Query: 181 YVLS 192
YVLS
Sbjct: 83 YVLS 86
Score = 42.3 bits (95), Expect = 0.008
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +2
Query: 260 KFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 397
K L KNSIF NI+ K+NIF TF S + ST+ LS LI +K
Sbjct: 110 KPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLILLLK 155
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 116 bits (278), Expect = 5e-25
Identities = 57/85 (67%), Positives = 62/85 (72%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANSSIDI LHDTYYVVAHFH
Sbjct: 232 KVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFH 291
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTGL 255
YVLS +PLFTG+
Sbjct: 292 YVLSMGAVFAIMAGIVQWFPLFTGV 316
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 255 SLNSYILKIQFFTIFIGVNITFF 323
+LN++ LKIQF +FIGVN+TFF
Sbjct: 317 TLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 107 bits (257), Expect = 2e-22
Identities = 51/84 (60%), Positives = 60/84 (71%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSSIDI LHDTYYVVAHFH
Sbjct: 319 KVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFH 378
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVLS + +PLFTG
Sbjct: 379 YVLSMGAVFAIMAGFVHWFPLFTG 402
Score = 69.7 bits (163), Expect = 5e-11
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 411 KIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 107 bits (257), Expect = 2e-22
Identities = 51/96 (53%), Positives = 66/96 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFH
Sbjct: 319 KVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFH 378
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTGLH*ILIY*KFNF 288
YVLS + +PLF+G Y K +F
Sbjct: 379 YVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHF 414
Score = 69.3 bits (162), Expect = 6e-11
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3
Query: 255 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+L+ KI F +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 404 TLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 107 bits (256), Expect = 3e-22
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFH
Sbjct: 319 KVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFH 378
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTGLH*ILIY*KFNF 288
YVLS + +PLFTG ++ K +F
Sbjct: 379 YVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHF 414
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 255 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+LNS KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 404 TLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 106 bits (255), Expect = 3e-22
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1
Query: 16 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 195
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSM 384
Query: 196 XXXXXXXXXXXN*YPLFTG 252
+ +PLFTG
Sbjct: 385 GAVFAILAGFTHWFPLFTG 403
Score = 69.3 bits (162), Expect = 6e-11
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 255 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+LNS K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 405 TLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 106 bits (254), Expect = 4e-22
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+ILANSS+DI LHDTYYVVAHFH
Sbjct: 84 KVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFH 143
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVLS + +PLF+G
Sbjct: 144 YVLSMGAVFAIMGGFVHWFPLFSG 167
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 103 bits (248), Expect = 2e-21
Identities = 50/84 (59%), Positives = 59/84 (70%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K F LAT G I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFH
Sbjct: 320 KAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFH 379
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVLS + +PLFTG
Sbjct: 380 YVLSMGAVFAILAGFTHWFPLFTG 403
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3
Query: 255 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+LN+ K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 405 TLNNAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 100 bits (239), Expect = 3e-20
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F +AT+ G+ + + + LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAHFH
Sbjct: 296 KVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFH 355
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVLS + +PLF+G
Sbjct: 356 YVLSMGAVFAIFAGFTHWFPLFSG 379
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 98.3 bits (234), Expect = 1e-19
Identities = 49/96 (51%), Positives = 63/96 (65%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN+S+DI HDTYYVVAHFH
Sbjct: 319 KIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFH 378
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTGLH*ILIY*KFNF 288
YVLS P GL L+Y K +F
Sbjct: 379 YVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHF 414
Score = 62.9 bits (146), Expect = 5e-09
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = +3
Query: 219 GIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
G Y I I N K F+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 392 GWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 95.5 bits (227), Expect = 8e-19
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS+D+ LHDTYY VAHFH
Sbjct: 303 KIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFH 362
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTGL 255
YVLS +P+F GL
Sbjct: 363 YVLSMGAVFSILGGFIYWFPMFFGL 387
Score = 74.9 bits (176), Expect = 1e-12
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+N Y LKI F+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 389 MNEYFLKIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPD 429
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 94.7 bits (225), Expect = 1e-18
Identities = 42/64 (65%), Positives = 51/64 (79%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF +AT+ G I Y +L +GF+FLFT+GGLTG++LANS +DI LHDTYYVVAHFH
Sbjct: 321 KIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFH 380
Query: 181 YVLS 192
YVLS
Sbjct: 381 YVLS 384
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +3
Query: 219 GIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
G Y + I+ + + +I F+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 394 GFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF +ATI I+ +L +GF+FLFT+GGLTG++LANS +DI+LHDTYYVVAHFH
Sbjct: 326 KIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLANSGLDISLHDTYYVVAHFH 385
Query: 181 YVLS 192
YVLS
Sbjct: 386 YVLS 389
Score = 59.7 bits (138), Expect = 5e-08
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+I F++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 418 QIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 90.2 bits (214), Expect = 3e-17
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN +D LHDTYYVVAHFH
Sbjct: 361 KIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVAHFH 420
Query: 181 YVLS 192
YVLS
Sbjct: 421 YVLS 424
Score = 60.1 bits (139), Expect = 4e-08
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +3
Query: 261 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
N ++ ++ F+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 448 NEFLGQLHFWVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 89.0 bits (211), Expect = 7e-17
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 KIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAH 174
KIF LAT+ G+ N + + LGF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAH
Sbjct: 284 KIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAH 343
Query: 175 FHYVLS 192
FHYVLS
Sbjct: 344 FHYVLS 349
Score = 68.1 bits (159), Expect = 1e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +3
Query: 279 IQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 379 IHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 85.8 bits (203), Expect = 7e-16
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN+S +I HDTYYVVAHFH
Sbjct: 345 KIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLANASENIAFHDTYYVVAHFH 404
Query: 181 YVLS 192
YVLS
Sbjct: 405 YVLS 408
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 219 GIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
G Y I I S ++ KI F+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 418 GWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 79.0 bits (186), Expect = 8e-14
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 KIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 171
K+F LATI G + +P+ +G V LFT+GGLTGVILAN+++ LHD+YYVVA
Sbjct: 322 KVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVILANAALSTLLHDSYYVVA 381
Query: 172 HFHYVLSXXXXXXXXXXXXN*YPLFTGL 255
HFHYVLS +P +TG+
Sbjct: 382 HFHYVLSMGAVFAIFGGFWFWFPFWTGM 409
Score = 57.2 bits (132), Expect = 3e-07
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 420 FMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF L T G+ P F+FLFTVGGL+G+IL+ +S+DI LHDTYYVVAHFH
Sbjct: 329 KIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSAASLDIILHDTYYVVAHFH 388
Query: 181 YVLS 192
Y LS
Sbjct: 389 YTLS 392
Score = 56.4 bits (130), Expect = 5e-07
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +3
Query: 234 ISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+ ++Y S +S ++ F F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 407 LPYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ + +D HDTYYVVAHFH
Sbjct: 424 KIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVAHFH 483
Query: 181 YVLS 192
YV+S
Sbjct: 484 YVMS 487
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
++ F+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 516 QVHFWVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 76.2 bits (179), Expect = 5e-13
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 KIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 177
K+F +AT+ G I Y P GFV LFT+GG+TG+IL+N+ ID ++HDT+YVV HF
Sbjct: 322 KVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHF 380
Query: 178 HYVLS 192
HYVLS
Sbjct: 381 HYVLS 385
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
F+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 417 FWMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 171
KIF LATI+G + + +L +GF+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 336 KIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 73.7 bits (173), Expect = 3e-12
Identities = 29/63 (46%), Positives = 45/63 (71%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K F L T++G ++ + +L L FV +F +GGL+G+ +A + +DI +HDTY++VAHFH
Sbjct: 367 KTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFH 426
Query: 181 YVL 189
YVL
Sbjct: 427 YVL 429
Score = 39.1 bits (87), Expect = 0.076
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 213 YWGIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 371
+ IY ++ +N KI F FI +N TFF H LG+ G PRR +D
Sbjct: 438 FGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 72.1 bits (169), Expect = 9e-12
Identities = 38/68 (55%), Positives = 39/68 (57%)
Frame = +1
Query: 52 PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 231
P I F GGLTGVILANSS DI LHDTYYVVAH HYVLS
Sbjct: 254 PQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMGAVFAILAGIVQ 313
Query: 232 *YPLFTGL 255
+PLFTGL
Sbjct: 314 WFPLFTGL 321
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 275 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 397
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 71.7 bits (168), Expect = 1e-11
Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH--DTYYVVAH 174
KIF LAT+HGTQINY P++L LGFVFLFTVGG +N S+ I + Y+++
Sbjct: 22 KIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN---WSNFSLFINWYCSSRYHIMLL 78
Query: 175 FHYVLSXXXXXXXXXXXXN*YPLFTGLH*ILIY--*KFNFLQYLLE*I*HFFHNIF*V*L 348
+++ + +L+ KFN Y LE I HF HNIF
Sbjct: 79 LIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFNLQLYFLELILHFSHNIFLDLP 138
Query: 349 EYLDDIQIIQTHIFHEI 399
EYLDDIQI + E+
Sbjct: 139 EYLDDIQIFLMDLIVEM 155
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 70.1 bits (164), Expect = 4e-11
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
+GF+FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS
Sbjct: 433 VGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLS 473
Score = 49.6 bits (113), Expect = 5e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 240 FIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
FI SLN Y+L+ + +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 490 FIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 KIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAH 174
K+F L T T I ++ ++L L F+ FT GG TGVIL N +ID+ LHDTYYV+AH
Sbjct: 28 KVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGTTGVILGNGAIDVALHDTYYVIAH 86
Query: 175 FHYVLS 192
FH+VLS
Sbjct: 87 FHFVLS 92
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 237 SFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
SF + + I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 109 SFFGKTLRENTIIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 6e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 69.3 bits (162), Expect = 6e-11
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +1
Query: 16 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 195
+ T++G I++ +L LGF+FLF +GGLTGV LA S+ + L +TYYVV HFHYV++
Sbjct: 324 VGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAV 383
Query: 196 XXXXXXXXXXXN*YPLFTG 252
+P TG
Sbjct: 384 AGTFAIFGGVYYIFPKMTG 402
Score = 41.5 bits (93), Expect = 0.014
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 213 YWGIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
+ G+Y + + N I K F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 390 FGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 69.3 bits (162), Expect = 6e-11
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF T+ G +I N +L GF+ F +GGLTGV++A+ DI +HDTY+VV HFH
Sbjct: 329 KIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVGHFH 388
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVL + +P TG
Sbjct: 389 YVLFGGSAFALFSGVYHWFPKMTG 412
Score = 39.9 bits (89), Expect = 0.044
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
+N + ++ F FIG+N+TF P H LGL G+ RR + Y
Sbjct: 415 VNEPLGRLHFILTFIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 68.9 bits (161), Expect = 8e-11
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+IF +AT+ G++ +L LGF +F +GGL+GV++A+ D+ HDTY+VVAHFH
Sbjct: 340 QIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFH 399
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVL YP FTG
Sbjct: 400 YVLIGGAVFPLLGGLYYWYPKFTG 423
Score = 45.6 bits (103), Expect = 9e-04
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
K+ F+ F G N+TFFP H LGL G+PRR Y D
Sbjct: 432 KVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF L+T+ G QI + +L +GF+ FT+GGL+G + A + D HDTY+VVAHFH
Sbjct: 338 KIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVAHFH 397
Query: 181 YVL 189
YVL
Sbjct: 398 YVL 400
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 219 GIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
GI+ ++ L+ + + F IF G + FP H LGL G+PRR Y
Sbjct: 411 GIHHWFPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 68.5 bits (160), Expect = 1e-10
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
L F+ LFT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 56 LCFILLFTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLS 96
Score = 36.7 bits (81), Expect = 0.41
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 261 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+S L I F + + F P H LG +PRR DYPD
Sbjct: 128 SSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 68.1 bits (159), Expect = 1e-10
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K F + T+ I + P ++ +G V +F GG+TG+IL N+++DI LHDTYYVVAHFH
Sbjct: 380 KSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFH 439
Query: 181 YVL 189
V+
Sbjct: 440 LVM 442
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 219 GIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 365
G+Y ++ ++ + I F+ F+G + FFP H++G+AG PRRY
Sbjct: 453 GVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF L TI G + Y +L + F+ F +GG+TGV+LA ++ D HDTY+VVAHFH
Sbjct: 327 KIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFH 386
Query: 181 YVL 189
YV+
Sbjct: 387 YVI 389
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRR 362
KI F FIG ++TFF QHF+GL G+PRR
Sbjct: 419 KISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 171
++F +ATI ++ + P++ LGF+F+FTVGG+TGV++A ID +HDTY+VVA
Sbjct: 344 QVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVA 402
Query: 172 HFHYVL 189
HFHYVL
Sbjct: 403 HFHYVL 408
Score = 49.2 bits (112), Expect = 7e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
F+ +FIG N+TFFP H GL G+PRR YPD
Sbjct: 441 FWLMFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 67.3 bits (157), Expect = 3e-10
Identities = 25/41 (60%), Positives = 36/41 (87%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
+ F+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLS 138
Score = 33.5 bits (73), Expect = 3.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 264 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+++L++Q + G F+ H G G+PRR D PD
Sbjct: 163 AWLLRVQVVLLVWGTTCIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 KIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 177
K+F + T + + + L L F+ FT GG TGVIL N++ID+ LHDTYYV+AHF
Sbjct: 324 KVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGNAAIDVALHDTYYVIAHF 383
Query: 178 HYVLS 192
H+VLS
Sbjct: 384 HFVLS 388
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3
Query: 297 FIGVNITFFPQHFLGLAGIPRRYSDYPD 380
F+GV +TF P HFLG +PRR DYPD
Sbjct: 425 FVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 66.1 bits (154), Expect = 6e-10
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +3
Query: 270 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+ K+QF+ +FIGVN TFFPQHFLGL G+PRR SDYPD
Sbjct: 516 LAKMQFWLLFIGVNATFFPQHFLGLQGMPRRISDYPD 552
Score = 63.7 bits (148), Expect(2) = 3e-10
Identities = 37/71 (52%), Positives = 44/71 (61%), Gaps = 14/71 (19%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL--------------TGVILANSSID 138
KIF LAT +G I P +L LGFVFLFT+GGL +GV+LAN+S+D
Sbjct: 378 KIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLD 437
Query: 139 ITLHDTYYVVA 171
I HDTYYVVA
Sbjct: 438 IAFHDTYYVVA 448
Score = 23.4 bits (48), Expect(2) = 3e-10
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 151 DTYYVVAHFHYVLS 192
+T + HFHYVLS
Sbjct: 476 ETMLFIVHFHYVLS 489
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 117
KIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 112 KIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 66.5 bits (155), Expect = 4e-10
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K F ATI G ++ +N L + F+ +F VGGL+G+ +A +D+ HDTY++VAHFH
Sbjct: 370 KTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFH 429
Query: 181 YVL 189
Y+L
Sbjct: 430 YIL 432
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 371
+N + K F FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 456 MNEKLGKTHFVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F AT+ G +I +N ++ + F+ F +GGLTG++ A ID L DTY+VVAHFH
Sbjct: 337 KVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFH 396
Query: 181 YVL 189
YVL
Sbjct: 397 YVL 399
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
LN I +QF+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 423 LNERIGILQFWLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 65.7 bits (153), Expect = 8e-10
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+IF LATI + + L +GF+ +F +GGLTGV++A+ D +HDTY+VVAHFH
Sbjct: 334 QIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFH 393
Query: 181 YVL 189
YVL
Sbjct: 394 YVL 396
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
F IF G N+TFFP H LGL G+PRR Y
Sbjct: 429 FGLIFSGFNLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K F + T+ I +L +GFV F +GG+TGV LA+ +D+ LH TYYVV HFH
Sbjct: 403 KTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFH 462
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
Y++ +PL+TG
Sbjct: 463 YIVMGAIAFAGFAGIYYWFPLYTG 486
Score = 40.3 bits (90), Expect = 0.033
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
K+ F+ IG NITFF LG G+PRRY+ Y
Sbjct: 495 KMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYY 162
KIF LAT++G + +L LGF+ LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 318 KIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F +AT++G +I +L L F+ F VGG+TGV ++D+ LHDTY+V+ HFH
Sbjct: 328 KVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFH 387
Query: 181 YVLS 192
Y+++
Sbjct: 388 YIVN 391
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF LAT+ +N ++L +GF+ +F +GG++GV LA+ I++ D+YYVVAH H
Sbjct: 336 KIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASPPINVQQTDSYYVVAHMH 395
Query: 181 YVL 189
YVL
Sbjct: 396 YVL 398
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
L+ + K QF+ + I N+TFFP H G AG+PRR Y
Sbjct: 422 LDERLGKWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF + T++ I++ +L LG VF+F +GGLTG+ L +ID+ + D+ +VV HFH
Sbjct: 274 KIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFH 333
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YVL + +PL TG
Sbjct: 334 YVLGMAITLGILGAVIHWFPLATG 357
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
K+ F+ IF G NI +F Q G+ G PRRY DYP
Sbjct: 366 KLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 63.7 bits (148), Expect = 3e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 76 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
F+F+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS
Sbjct: 346 FIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLS 384
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 291 TIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
T+FIG N+ FFP H LG+ PRR SDYP
Sbjct: 418 TLFIGSNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 63.7 bits (148), Expect = 3e-09
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F + T+ ++ +L +GFV F +GG+TGV LA ID+ LHDTYYVV HFH
Sbjct: 372 KVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFH 431
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
+++ +P+ TG
Sbjct: 432 FIVYGAIGFALFAASYYWFPMVTG 455
Score = 35.5 bits (78), Expect = 0.94
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
F+T +G N TF +LG G+PRRY+ Y
Sbjct: 467 FWTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 62.5 bits (145), Expect = 7e-09
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F + T+ G ++ + LGF+F F +GG+TGV+L+ + +D HD+Y+VVAHFH
Sbjct: 328 KLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFH 387
Query: 181 YVL 189
VL
Sbjct: 388 NVL 390
Score = 37.5 bits (83), Expect = 0.23
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 420 RLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 62.1 bits (144), Expect = 9e-09
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF L T++ +I++ +L L F+ F +GG+TGV+LA ++ D H+TY++V+HFH
Sbjct: 358 KIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFH 417
Query: 181 YVL 189
YVL
Sbjct: 418 YVL 420
Score = 45.6 bits (103), Expect = 9e-04
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
LN I K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 444 LNERIGKWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +1
Query: 16 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
L +++G+++ N L LGF+ +F GG++G LA SIDI LH TY+VV HFH V+
Sbjct: 371 LGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVM 428
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
+N + KI F+ FIG F P H+LG+ G RRYS + D
Sbjct: 452 MNETLGKIHFWGTFIGAYCIFMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F AT++ I + GF+F GG+TG+ LA S+D+ HDTY++VAHFH
Sbjct: 337 KVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFH 396
Query: 181 YVL 189
+++
Sbjct: 397 FIM 399
Score = 40.3 bits (90), Expect = 0.033
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 294 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
I +G N TF PQ LG G+PRRY YP+
Sbjct: 435 IILGFNFTFIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F L TI+ ++ + I+ LGF+ F++GG+TGV+LA D LH++ +V+AHFH
Sbjct: 362 KLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFH 421
Query: 181 YVL 189
V+
Sbjct: 422 NVI 424
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 153
KIF LATI+G I ++ + F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 319 KIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 60.5 bits (140), Expect = 3e-08
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +1
Query: 76 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
F+ F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 350 FIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 38.7 bits (86), Expect = 0.10
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 300 IGVNITFFPQHFLGLAGIPRRYSDYPD 380
I V +TF P HF G + +PRR DYPD
Sbjct: 426 ISVLLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 60.1 bits (139), Expect = 4e-08
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F + T++ + + GF+F GG+TG+ L S+D+ HDTY+VVAHFH
Sbjct: 344 KVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFH 403
Query: 181 YVL 189
+++
Sbjct: 404 FIM 406
Score = 40.3 bits (90), Expect = 0.033
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 294 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
I +G N TF PQ LG G+PRRY +YP+
Sbjct: 442 IILGFNATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 59.7 bits (138), Expect = 5e-08
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 22 TIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
T+ + Y+ +L LG VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++
Sbjct: 363 TLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMA 419
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 59.7 bits (138), Expect = 5e-08
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +1
Query: 67 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
++ F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V++
Sbjct: 325 QVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 59.3 bits (137), Expect = 7e-08
Identities = 33/96 (34%), Positives = 48/96 (50%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K++ + T+ I+ +L LGF+ F GGLTG+ L N +D+ L DT +VVAHFH
Sbjct: 358 KVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFH 417
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTGLH*ILIY*KFNF 288
V+ + YP TG + KF+F
Sbjct: 418 MVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHF 453
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
LN + K F+ F+G + FFP H+LGL G+PRRY + D
Sbjct: 444 LNDVLGKFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 58.8 bits (136), Expect = 9e-08
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F L T+ + N +L +G + F G+TGV+LA IDI + +TY+VVAHFH
Sbjct: 344 KVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTYFVVAHFH 403
Query: 181 YVLSXXXXXXXXXXXXN*YPLFTG 252
YV+ + +P FTG
Sbjct: 404 YVIFNTIVFGVFAGIYHWFPKFTG 427
Score = 37.5 bits (83), Expect = 0.23
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
K+ F FIG + + P H+ GL G+PRR + Y
Sbjct: 436 KVHFVLTFIGATLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F L TI+ ++ + IL LGF+ F++GG+TGV+LA D LH++ +++AHFH
Sbjct: 363 KLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFH 422
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/60 (40%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN +D +H+T ++VAHFH
Sbjct: 382 KIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFH 441
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+F T+ ++ + P +L LG +FL VGGLTG++LA +I+ T+H++ +VVAHFH
Sbjct: 381 KVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFH 440
Query: 181 YVL 189
++
Sbjct: 441 CMM 443
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K+ AT++G +I Y + + F+ +F +GG+TGV ID L+ TY+VV HFH
Sbjct: 317 KVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVGHFH 376
Query: 181 YVL 189
Y++
Sbjct: 377 YMV 379
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
LGF+F+F +GGLTGV++A D HD+Y++VAH HYVL
Sbjct: 430 LGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVL 469
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 225 Y*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 374
Y + + R +L+ + + F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 482 YYWMPYTSRQALSERLGRWVFGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 56.8 bits (131), Expect = 4e-07
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
LGF+F+F +GG+TGV++A ++ HD+Y+VVAH HYVL
Sbjct: 383 LGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVL 422
Score = 38.3 bits (85), Expect = 0.13
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
F+ +F G N+ FF H G+ G+PRR + YP
Sbjct: 455 FWLMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 56.4 bits (130), Expect = 5e-07
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +1
Query: 4 IFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHY 183
+F +ATI + + L GFV +F VGG++GV+ A +D L DTY+VVAH HY
Sbjct: 355 VFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHY 414
Query: 184 VLSXXXXXXXXXXXXN*YPLFTG 252
VL +P FTG
Sbjct: 415 VLLGINVFPVLGGVAYWFPKFTG 437
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 258 LNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
+N K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 440 MNERFGKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +1
Query: 76 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
F+ F GG TG++L++ S+DI LHDTY+VV HFH VLS
Sbjct: 354 FLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLS 392
Score = 35.1 bits (77), Expect = 1.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 288 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 425 FLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 55.6 bits (128), Expect = 8e-07
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
K F + T+ I + ++ +GF+ F GGLTG++LA+ +D L D+Y+++AHFH
Sbjct: 341 KFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFH 400
Query: 181 YVL 189
Y L
Sbjct: 401 YTL 403
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 276 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 380
KI F+ F+G + TF QH++G G+PRRY+DY D
Sbjct: 433 KIHFWLTFVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
+ F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 502 MSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
Score = 34.3 bits (75), Expect = 2.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 312 ITFFPQHFLGLAGIPRRYSDYP 377
+ F PQ +LG +G+PRR DYP
Sbjct: 583 VAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 52.8 bits (121), Expect = 6e-06
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 4 IFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHY 183
+F + T+ ++ + L LG + LF +GG+TGV L +D TY+VVAHFHY
Sbjct: 341 VFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHY 400
Query: 184 VL 189
V+
Sbjct: 401 VM 402
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 52.4 bits (120), Expect = 8e-06
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
L F F +GGLTGV++A D +HDTY++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVL 396
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 52.4 bits (120), Expect = 8e-06
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = +2
Query: 491 LIFFKSPSSIE*YQNLPPAEHSYNELPILRN 583
L PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 456 LFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
++F +AT+ ++ +L G + +FT GGLTGV++A + D +HDTY++VAH H
Sbjct: 360 QLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLH 419
Query: 181 YVL 189
Y L
Sbjct: 420 YTL 422
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 219 GIY*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
G+Y I + +L+ + + F+ +F G N+TF P H GL G+PRR YP
Sbjct: 433 GVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF + T+ G +I +GF+F F +GG+TGV L D + +YYVVAHFH
Sbjct: 336 KIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFH 395
Query: 181 YVL 189
V+
Sbjct: 396 NVM 398
Score = 41.1 bits (92), Expect = 0.019
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 285 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 431 FWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 16 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+ TI G ++ N +L L + F +GGLTG+ A+ D+ LH+TY+V+AHFH
Sbjct: 415 IGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPADLQLHNTYWVIAHFH 469
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +1
Query: 16 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 195
+AT+ G + + IL L F +GG++GV ++ +ID +H YYVVAHFHY +
Sbjct: 352 IATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVG 411
Query: 196 XXXXXXXXXXXN*YPLFTG 252
+P FTG
Sbjct: 412 VAVMGLMGNLYYYFPKFTG 430
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
L F F +GGLTGV++A D +HDT+++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVL 396
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +2
Query: 491 LIFFKSPSSIE*YQNLPPAEHSYNELPILRN 583
L PSSIE YQN PP+EHSYNELPIL N
Sbjct: 44 LFSLNMPSSIEWYQNFPPSEHSYNELPILSN 74
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +1
Query: 22 TIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
T++ ++ Y +L +G + F +GG TGV L + +ID TY+VVAHFHY+L
Sbjct: 333 TLYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYIL 388
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 48.8 bits (111), Expect = 9e-05
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +2
Query: 260 KFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 397
K L KNSIFYNI+ K IFSTTFF S +T T+ S LI +K
Sbjct: 109 KSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLIQLLK 154
Score = 34.7 bits (76), Expect = 1.6
Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Frame = +3
Query: 27 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXX 206
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 207 CNYWGIY*LISFIYRPSLNSYILKIQ-FFTIFIGVNITFFPQHF 335
CNY GIY L+ I + S ++K F+ IF G + F F
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFF 134
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +1
Query: 4 IFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+F +AT+ +I ++ ++ +G + LF G GV+ A +D T HDTY+VV HFH
Sbjct: 321 VFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFH 379
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 225 Y*LISFIYRPSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 377
Y + F+ N + KI F F+G + FF QH LG+ G+PRR DYP
Sbjct: 395 YYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 47.2 bits (107), Expect = 3e-04
Identities = 38/75 (50%), Positives = 38/75 (50%)
Frame = +1
Query: 271 Y*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y 450
Y KFNFL Y E I F NIF LEYLDDI IIQ EI F H F Y
Sbjct: 406 YSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHHSDLTFHCLPSYSY 465
Query: 451 *LLFENQ*LTNELTY 495
LLFENQ EL Y
Sbjct: 466 SLLFENQSFITELLY 480
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 2 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 103
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
Score = 36.7 bits (81), Expect = 0.41
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 519 LNDIKIYHQQNIHIMNYQF 575
LND KIY QQ+IH+MNYQF
Sbjct: 489 LNDTKIYLQQSIHMMNYQF 507
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/63 (31%), Positives = 38/63 (60%)
Frame = +1
Query: 1 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
KIF + TI + + + F+ +F++GG +GVIL+ ++D H++ +++AHFH
Sbjct: 357 KIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFH 416
Query: 181 YVL 189
V+
Sbjct: 417 SVI 419
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 276 KIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDY 374
K F +F IGV +TFFP +FLG G+ RR + Y
Sbjct: 447 KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 46.8 bits (106), Expect = 4e-04
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +2
Query: 254 FIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 397
F K KNSI+ NIY SK NIFS TFF +T +F SRLI +K
Sbjct: 107 FYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPLFWFSRLILLLK 154
Score = 40.3 bits (90), Expect = 0.033
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 1/119 (0%)
Frame = +3
Query: 3 NF*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXX 182
NF MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 23 NFLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPL 82
Query: 183 XXXXXXXXCNYWGIY*LISFIYRPSLNSYILKIQFF-TIFIGVNITFFPQHFLGLAGIP 356
CNY IY L+ + S ++K + I+ + F P F P
Sbjct: 83 RSFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTP 141
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +2
Query: 512 SSIE*YQNLPPAEHSYNELPILRN 583
SSIE QN PPAEHSYNELPIL N
Sbjct: 28 SSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.014
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 85 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 41.1 bits (92), Expect = 0.019
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 512 SSIE*YQNLPPAEHSYNELPILRN 583
SS+E QN PPAEHSYNELP+L N
Sbjct: 44 SSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 512 SSIE*YQNLPPAEHSYNELPILRN 583
SSIE QN PPAEHSY+ELP+L N
Sbjct: 52 SSIEWLQNSPPAEHSYSELPLLTN 75
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 39.9 bits (89), Expect = 0.044
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2
Query: 512 SSIE*YQNLPPAEHSYNELPILRN 583
SSIE +QN PPA HSY+E+PIL N
Sbjct: 39 SSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.058
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 79 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 39.1 bits (87), Expect = 0.076
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +2
Query: 482 TN*LIFF--KSPSSIE*YQNLPPAEHSYNELPIL 577
TN I F ++ +SIE QNLPPAEHSY+ELP +
Sbjct: 20 TNRQILFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 39.1 bits (87), Expect = 0.076
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +1
Query: 70 LGFVFL-----FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
LG FL F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 103 LGMTFLIALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 270 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 380
+++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 400 LMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
Score = 37.1 bits (82), Expect = 0.31
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 49 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 225
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIA 383
Query: 226 XN*YPLFTG 252
+ +P TG
Sbjct: 384 YDLWPHLTG 392
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.23
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 79 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 36.7 bits (81), Expect = 0.41
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 512 SSIE*YQNLPPAEHSYNELPILRN 583
+SIE NLPP EHSY+ELP++ N
Sbjct: 44 NSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.54
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 70 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.54
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 112 VILANSSIDITLHDTYYVVAHFHYV 186
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.54
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 94 VGGLTGVILANSSIDITLHDTYYVVAHFH 180
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 0.71
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 88 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 189
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 0.94
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +1
Query: 49 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 192
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFA 374
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 0.94
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 49 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 35.1 bits (77), Expect = 1.2
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 4 IFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+F LA + + I P + L +F + G +GV A + ++ LH+T +VVAHFH
Sbjct: 344 VFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVAHFH 402
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 79 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 1.6
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 85 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 79 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 33.1 bits (72), Expect = 5.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 509 PSSIE*YQNLPPAEHSYNELPILRN 583
P+S+E + PPA+HSY++ P+L N
Sbjct: 34 PTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 5.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 85 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 6.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 100 GLTGVILANSSIDITLHDTYYVVAHFHYVL 189
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 6.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 88 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 180
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 32.3 bits (70), Expect = 8.7
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 512 SSIE*YQNLPPAEHSYNELPILRN 583
SSIE + PPA+HSY E+P++ N
Sbjct: 44 SSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY06083;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06083 - Plasmodium yoelii yoelii
Length = 1402
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = -1
Query: 429 EKYMNLMKKLYFMKYMSL---DNLNIVEVFQLNLKNVVEK 319
E+++NLM + YF+KY+++ +N+ I F L +K +EK
Sbjct: 249 ERHINLMDQSYFIKYINILLYNNIKIENSFFLFIKKYIEK 288
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,270,603
Number of Sequences: 1657284
Number of extensions: 5883352
Number of successful extensions: 15107
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 14554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15102
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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